RNA–Protein interactions for RNA: YKL174C

TPO5, Transcript of Protein involved in excretion of putrescine and spermidine, yeast

Gene TPO5, Length 1,857 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPO5	YKL174C	SDP1	P40479	209 aa		4.15	□□□□□ -1.74
TPO5	YKL174C	CHA4	P43634	648 aa		4.15	□□□□□ -1.74
TPO5	YKL174C	SLU7	Q02775	382 aa	Known RBP	4.15	□□□□□ -1.74
TPO5	YKL174C	CDA2	Q06703	312 aa		4.15	□□□□□ -1.74
TPO5	YKL174C	GIN4	Q12263	1142 aa		4.15	□□□□□ -1.74
TPO5	YKL174C	YKR051W	P36142	418 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	ECL1	P48235	211 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	PSP2	P50109	593 aa	Known RBP	4.15	□□□□□ -1.75
TPO5	YKL174C	ZIP2	P53061	704 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	NCS6	P53088	359 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
TPO5	YKL174C	VPS30	Q02948	557 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	ASM4	Q05166	528 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	GUD1	Q07729	489 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	GPB1	Q08886	897 aa		4.15	□□□□□ -1.75
TPO5	YKL174C	HIS5	P07172	385 aa		4.14	□□□□□ -1.75
TPO5	YKL174C	CDC20	P26309	610 aa		4.14	□□□□□ -1.75
TPO5	YKL174C	YJR120W	P47157	116 aa		4.14	□□□□□ -1.75
TPO5	YKL174C	YAP6	Q03935	383 aa		4.14	□□□□□ -1.75
TPO5	YKL174C	CRR1	Q05790	422 aa		4.14	□□□□□ -1.75
TPO5	YKL174C	PRP4	P20053	465 aa	Known RBP	4.13	□□□□□ -1.75
TPO5	YKL174C	TOM20	P35180	183 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	ATG19	P35193	415 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	SAP190	P36123	1033 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	PAF1	P38351	445 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	RPN10	P38886	268 aa	Known RBP	4.13	□□□□□ -1.75
TPO5	YKL174C	PUS2	P53167	370 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	YPL277C	Q08989	487 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	TMA17	Q12513	150 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	TUB3	P09734	445 aa	Known RBP	4.13	□□□□□ -1.75
TPO5	YKL174C	MAC1	P35192	417 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	HSL7	P38274	827 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	CKB2	P38930	258 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	SHR5	P41912	237 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	ATG36	P46983	293 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	BNA2	P47125	453 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	PBP1	P53297	722 aa	Known RBP	4.13	□□□□□ -1.75
TPO5	YKL174C	ARP4	P80428	489 aa		4.13	□□□□□ -1.75
TPO5	YKL174C	RPS13	P05756	151 aa	Known RBP	4.12	□□□□□ -1.75
TPO5	YKL174C	PRP19	P32523	503 aa	Known RBP	4.12	□□□□□ -1.75
TPO5	YKL174C	AIM3	P38266	947 aa	Known RBP	4.12	□□□□□ -1.75
TPO5	YKL174C	ENP1	P38333	483 aa	Known RBP	4.12	□□□□□ -1.75
TPO5	YKL174C	YHR078W	P38799	552 aa		4.12	□□□□□ -1.75
TPO5	YKL174C	MSS4	P38994	779 aa		4.12	□□□□□ -1.75
TPO5	YKL174C	FOL1	P53848	824 aa		4.12	□□□□□ -1.75
TPO5	YKL174C	ACK1	Q07622	623 aa	Predicted RBP	4.12	□□□□□ -1.75
TPO5	YKL174C	FAP7	Q12055	197 aa	Predicted RBP	4.12	□□□□□ -1.75
TPO5	YKL174C	KCS1	Q12494	1050 aa		4.12	□□□□□ -1.75
TPO5	YKL174C	GAS1	P22146	559 aa	Known RBP	4.11	□□□□□ -1.75
TPO5	YKL174C	SEC21	P32074	935 aa	Known RBP	4.11	□□□□□ -1.75
TPO5	YKL174C	FLR1	P38124	548 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	SSY5	P47002	699 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	NPY1	P53164	384 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	YLR224W	Q05947	369 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	NOP12	Q08208	459 aa	Known RBP	4.11	□□□□□ -1.75
TPO5	YKL174C	EUG1	P32474	517 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	MNN4	P36044	1178 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	YKR018C	P36114	725 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	OAF1	P39720	1047 aa	Predicted RBP	4.11	□□□□□ -1.75
TPO5	YKL174C	NUG1	P40010	520 aa	Known RBP	4.11	□□□□□ -1.75
TPO5	YKL174C	RTS3	P53289	263 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	LEE1	Q02799	301 aa	Known RBP	4.11	□□□□□ -1.75
TPO5	YKL174C	MUS81	Q04149	632 aa	Predicted RBP	4.11	□□□□□ -1.75
TPO5	YKL174C	RXT3	Q07458	294 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	DCS2	Q12123	353 aa		4.11	□□□□□ -1.75
TPO5	YKL174C	SOD2	P00447	233 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	SED4	P25365	1065 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	THI80	P35202	319 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	PLB1	P39105	664 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	SPT20	P50875	604 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	COG6	P53959	839 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	ECM9	Q02202	377 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	HFD1	Q04458	532 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	RPN7	Q06103	429 aa	Known RBP	4.1	□□□□□ -1.75
TPO5	YKL174C	NPC2	Q12408	173 aa		4.1	□□□□□ -1.75
TPO5	YKL174C	MRC1	P25588	1096 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	LST4	P34239	828 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	SAK1	P38990	1142 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	HXT6	P39003	570 aa	Known RBP	4.09	□□□□□ -1.75
TPO5	YKL174C	HXT7	P39004	570 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	DOT6	P40059	670 aa	Known RBP	4.09	□□□□□ -1.75
TPO5	YKL174C	CCT5	P40413	562 aa	Known RBP	4.09	□□□□□ -1.75
TPO5	YKL174C	PFA3	P42836	336 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	GZF3	P42944	551 aa	Known RBP	4.09	□□□□□ -1.75
TPO5	YKL174C	ASI2	P53895	289 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	YOR352W	Q08816	343 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	LAS17	Q12446	633 aa		4.09	□□□□□ -1.75
TPO5	YKL174C	PRP6	P19735	899 aa	Predicted RBP	4.09	□□□□□ -1.76
TPO5	YKL174C	RNQ1	P25367	405 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	DAL3	P32459	195 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	YBR071W	P38243	211 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	VHR1	P40522	640 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	YFL052W	P43551	465 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	RET2	P43621	546 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	PCL10	P53124	433 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	MRPS35	P53292	345 aa		4.09	□□□□□ -1.76
TPO5	YKL174C	BRE5	P53741	515 aa	Known RBP	4.09	□□□□□ -1.76
TPO5	YKL174C	YTM1	Q12024	460 aa	Predicted RBP	4.09	□□□□□ -1.76
TPO5	YKL174C	MIP6	P38760	659 aa	Known RBP	4.08	□□□□□ -1.76
TPO5	YKL174C	RIM8	P53179	542 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms