RNA–Protein interactions for RNA: YJR139C

HOM6, Transcript of Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), yeast

Gene HOM6, Length 1,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOM6	YJR139C	PSY4	P38193	441 aa		13.92	□□□□□ -0.18
HOM6	YJR139C	SSB2	P40150	613 aa	Known RBP	13.92	□□□□□ -0.18
HOM6	YJR139C	FAF1	P40546	346 aa	Predicted RBP	13.92	□□□□□ -0.18
HOM6	YJR139C	SSL2	Q00578	843 aa		13.92	□□□□□ -0.18
HOM6	YJR139C	SLX4	Q12098	748 aa		13.92	□□□□□ -0.18
HOM6	YJR139C	SEC21	P32074	935 aa	Known RBP	13.91	□□□□□ -0.18
HOM6	YJR139C	RFS1	P38234	210 aa	Known RBP	13.91	□□□□□ -0.18
HOM6	YJR139C	YFL052W	P43551	465 aa		13.91	□□□□□ -0.18
HOM6	YJR139C	RCR2	Q03446	210 aa	Known RBP	13.91	□□□□□ -0.18
HOM6	YJR139C	CEF1	Q03654	590 aa	Predicted RBP	13.91	□□□□□ -0.18
HOM6	YJR139C	SNU56	Q03782	492 aa	Known RBP	13.91	□□□□□ -0.18
HOM6	YJR139C	TMA16	Q08687	178 aa		13.91	□□□□□ -0.18
HOM6	YJR139C	LAA1	P39526	2014 aa		13.91	□□□□□ -0.18
HOM6	YJR139C	BIO2	P32451	375 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	YET1	P35723	206 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	MNR2	P35724	969 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	PTC4	P38089	393 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	FTR1	P40088	404 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	YGR130C	P53278	816 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	TBF1	Q02457	562 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	SPO75	Q07798	868 aa		13.9	□□□□□ -0.18
HOM6	YJR139C	SGT2	Q12118	346 aa	Known RBP	13.9	□□□□□ -0.18
HOM6	YJR139C	NAT1	P12945	854 aa	Known RBP	13.89	□□□□□ -0.19
HOM6	YJR139C	IME1	P21190	360 aa		13.89	□□□□□ -0.19
HOM6	YJR139C	RAD54	P32863	898 aa		13.89	□□□□□ -0.19
HOM6	YJR139C	YHR054C	P38780	354 aa		13.89	□□□□□ -0.19
HOM6	YJR139C	REC8	Q12188	680 aa		13.89	□□□□□ -0.19
HOM6	YJR139C	SWI3	P32591	825 aa		13.88	□□□□□ -0.19
HOM6	YJR139C	GCS1	P35197	352 aa		13.88	□□□□□ -0.19
HOM6	YJR139C	YKL023W	P36103	277 aa	Known RBP	13.88	□□□□□ -0.19
HOM6	YJR139C	DAS1	P47005	663 aa		13.88	□□□□□ -0.19
HOM6	YJR139C	RGA2	Q06407	1009 aa		13.88	□□□□□ -0.19
HOM6	YJR139C	CDD1	Q06549	142 aa		13.88	□□□□□ -0.19
HOM6	YJR139C	CTF3	Q12748	733 aa		13.88	□□□□□ -0.19
HOM6	YJR139C	POL3	P15436	1097 aa		13.87	□□□□□ -0.19
HOM6	YJR139C	APL1	P27351	700 aa		13.87	□□□□□ -0.19
HOM6	YJR139C	CYS3	P31373	394 aa	Known RBP	13.87	□□□□□ -0.19
HOM6	YJR139C	FIG4	P42837	879 aa		13.87	□□□□□ -0.19
HOM6	YJR139C	YNL034W	P53963	612 aa		13.87	□□□□□ -0.19
HOM6	YJR139C	YNL018C	P53976	612 aa		13.87	□□□□□ -0.19
HOM6	YJR139C	WAR1	Q03631	944 aa		13.87	□□□□□ -0.19
HOM6	YJR139C	SPO71	Q03868	1245 aa		13.87	□□□□□ -0.19
HOM6	YJR139C	CBF2	P32504	956 aa		13.86	□□□□□ -0.19
HOM6	YJR139C	RKM3	P38222	552 aa		13.86	□□□□□ -0.19
HOM6	YJR139C	KIC1	P38692	1080 aa		13.86	□□□□□ -0.19
HOM6	YJR139C	SPT8	P38915	602 aa		13.86	□□□□□ -0.19
HOM6	YJR139C	COS5	P47187	383 aa		13.86	□□□□□ -0.19
HOM6	YJR139C	SPC98	P53540	846 aa		13.86	□□□□□ -0.19
HOM6	YJR139C	SDH5	Q08230	162 aa		13.86	□□□□□ -0.19
HOM6	YJR139C	HAP2	P06774	265 aa		13.85	□□□□□ -0.19
HOM6	YJR139C	PEX2	P32800	271 aa		13.85	□□□□□ -0.19
HOM6	YJR139C	CTM1	P38818	585 aa		13.85	□□□□□ -0.19
HOM6	YJR139C	YEL023C	P39992	682 aa		13.85	□□□□□ -0.19
HOM6	YJR139C	RSC1	P53236	928 aa		13.85	□□□□□ -0.19
HOM6	YJR139C	STP1	Q00947	519 aa		13.85	□□□□□ -0.19
HOM6	YJR139C	IWR1	Q07532	353 aa	Predicted RBP	13.85	□□□□□ -0.19
HOM6	YJR139C	STB5	P38699	743 aa		13.84	□□□□□ -0.19
HOM6	YJR139C	APM2	P38700	605 aa		13.84	□□□□□ -0.19
HOM6	YJR139C	MGA2	P40578	1113 aa		13.84	□□□□□ -0.19
HOM6	YJR139C	RPA49	Q01080	415 aa	Predicted RBP	13.84	□□□□□ -0.19
HOM6	YJR139C	YLR297W	Q05899	129 aa		13.84	□□□□□ -0.19
HOM6	YJR139C	MRI1	Q06489	411 aa	Known RBP	13.84	□□□□□ -0.19
HOM6	YJR139C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	13.84	□□□□□ -0.19	not detected
HOM6	YJR139C	YDL206W	Q12424	762 aa		13.84	□□□□□ -0.19
HOM6	YJR139C	VPS3	P23643	1011 aa		13.83	□□□□□ -0.2
HOM6	YJR139C	TBS1	P38114	1094 aa		13.83	□□□□□ -0.2
HOM6	YJR139C	EFM2	P38347	419 aa		13.83	□□□□□ -0.2
HOM6	YJR139C	MIP6	P38760	659 aa	Known RBP	13.83	□□□□□ -0.2
HOM6	YJR139C	YIR016W	P40572	265 aa		13.83	□□□□□ -0.2
HOM6	YJR139C	SMC3	P47037	1230 aa		13.83	□□□□□ -0.2
HOM6	YJR139C	ABP140	Q08641	628 aa	Known RBP	13.83	□□□□□ -0.2
HOM6	YJR139C	CWC2	Q12046	339 aa	Predicted RBP	13.83	□□□□□ -0.2
HOM6	YJR139C	GIS3	Q12418	502 aa		13.83	□□□□□ -0.2
HOM6	YJR139C	RRT12	P25381	491 aa		13.82	□□□□□ -0.2
HOM6	YJR139C	CDC11	P32458	415 aa		13.82	□□□□□ -0.2
HOM6	YJR139C	SIP5	P40210	489 aa	Known RBP	13.82	□□□□□ -0.2
HOM6	YJR139C	CPR7	P47103	393 aa		13.82	□□□□□ -0.2
HOM6	YJR139C	ALT1	P52893	592 aa		13.82	□□□□□ -0.2
HOM6	YJR139C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.82	□□□□□ -0.2	not detected
HOM6	YJR139C	PLP2	Q12017	286 aa		13.82	□□□□□ -0.2
HOM6	YJR139C	YMR084W	A2P2R3	262 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	GAL80	P04387	435 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	RPS6A	P0CX37	236 aa	Known RBP	13.81	□□□□□ -0.2
HOM6	YJR139C	RPS6B	P0CX38	236 aa	Predicted RBP	13.81	□□□□□ -0.2
HOM6	YJR139C	CDC42	P19073	191 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	MSH3	P25336	1018 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	SYN8	P31377	255 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	KNS1	P32350	737 aa	Predicted RBP	13.81	□□□□□ -0.2
HOM6	YJR139C	HMT1	P38074	348 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	AGP2	P38090	596 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	PCM1	P38628	557 aa	Known RBP	13.81	□□□□□ -0.2
HOM6	YJR139C	MMF1	P40185	145 aa	Known RBP	13.81	□□□□□ -0.2
HOM6	YJR139C	NUT1	P53114	1132 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	13.81	□□□□□ -0.2	not detected
HOM6	YJR139C	YML083C	Q04526	418 aa		13.81	□□□□□ -0.2
HOM6	YJR139C	CSR1	Q06705	408 aa	Known RBP	13.81	□□□□□ -0.2
HOM6	YJR139C	MRPL10	P36520	322 aa		13.8	□□□□□ -0.2
HOM6	YJR139C	SHM1	P37292	490 aa	Predicted RBP	13.8	□□□□□ -0.2
HOM6	YJR139C	YHR131C	P38835	850 aa		13.8	□□□□□ -0.2
HOM6	YJR139C	CCC2	P38995	1004 aa		13.8	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 76.8 ms