RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C FMP52P40008 231 aa2.45□□□□□ -2.02
VPS55YJR044C HOS4P40480 1083 aa2.45□□□□□ -2.02
VPS55YJR044C TEL2P53038 688 aa2.45□□□□□ -2.02
VPS55YJR044C SMX3P54999 86 aaPredicted RBP2.45□□□□□ -2.02
VPS55YJR044C TAF3Q12297 353 aa2.45□□□□□ -2.02
VPS55YJR044C YLR415CO13578 112 aa2.44□□□□□ -2.02
VPS55YJR044C LAT1P12695 482 aaKnown RBP2.44□□□□□ -2.02
VPS55YJR044C PZF1P39933 429 aa2.44□□□□□ -2.02
VPS55YJR044C SIT1P39980 628 aa2.44□□□□□ -2.02
VPS55YJR044C YEL020CP39994 560 aa2.44□□□□□ -2.02
VPS55YJR044C PFA3P42836 336 aa2.44□□□□□ -2.02
VPS55YJR044C CCM1P48237 864 aaPredicted RBP2.44□□□□□ -2.02
VPS55YJR044C HSV2P50079 448 aaPredicted RBP2.44□□□□□ -2.02
VPS55YJR044C CWC24P53769 259 aa2.44□□□□□ -2.02
VPS55YJR044C RIM13Q03792 727 aa2.44□□□□□ -2.02
VPS55YJR044C SHE9Q04172 456 aa2.44□□□□□ -2.02
VPS55YJR044C OPI10Q08202 246 aa2.44□□□□□ -2.02
VPS55YJR044C YOR022CQ12204 715 aa2.44□□□□□ -2.02
VPS55YJR044C HEM3P28789 327 aa2.43□□□□□ -2.02
VPS55YJR044C HIR1P32479 840 aa2.43□□□□□ -2.02
VPS55YJR044C HBS1P32769 611 aaKnown RBP2.43□□□□□ -2.02
VPS55YJR044C YBR284WP38150 797 aa2.43□□□□□ -2.02
VPS55YJR044C KRI1P42846 591 aaKnown RBP2.43□□□□□ -2.02
VPS55YJR044C SSY5P47002 699 aa2.43□□□□□ -2.02
VPS55YJR044C UBC11P52492 156 aa2.43□□□□□ -2.02
VPS55YJR044C LCD1Q04377 747 aa2.43□□□□□ -2.02
VPS55YJR044C YPR071WQ12346 211 aa2.43□□□□□ -2.02
VPS55YJR044C HOM2P13663 365 aaKnown RBP2.42□□□□□ -2.02
VPS55YJR044C CYS3P31373 394 aaKnown RBP2.42□□□□□ -2.02
VPS55YJR044C REC104P33323 182 aa2.42□□□□□ -2.02
VPS55YJR044C UBS1P38290 277 aa2.42□□□□□ -2.02
VPS55YJR044C NDC80P40460 691 aa2.42□□□□□ -2.02
VPS55YJR044C YCL002CP25565 263 aa2.41□□□□□ -2.02
VPS55YJR044C NGG1P32494 702 aa2.41□□□□□ -2.02
VPS55YJR044C STE5P32917 917 aa2.41□□□□□ -2.02
VPS55YJR044C PBY1P38254 753 aa2.41□□□□□ -2.02
VPS55YJR044C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
VPS55YJR044C OSW1Q08692 278 aa2.41□□□□□ -2.02
VPS55YJR044C ENV7Q12003 364 aa2.41□□□□□ -2.02
VPS55YJR044C VPS34P22543 875 aa2.4□□□□□ -2.03
VPS55YJR044C MRP8P35719 219 aa2.4□□□□□ -2.03
VPS55YJR044C TPO2P53283 614 aa2.4□□□□□ -2.03
VPS55YJR044C GPR1Q12361 961 aa2.4□□□□□ -2.03
VPS55YJR044C PRC1P00729 532 aa2.39□□□□□ -2.03
VPS55YJR044C ERG11P10614 530 aa2.39□□□□□ -2.03
VPS55YJR044C DAL7P21826 554 aa2.39□□□□□ -2.03
VPS55YJR044C ASF1P32447 279 aa2.39□□□□□ -2.03
VPS55YJR044C SIC1P38634 284 aa2.39□□□□□ -2.03
VPS55YJR044C LRS4Q04087 347 aaKnown RBP2.39□□□□□ -2.03
VPS55YJR044C SEG1Q04279 960 aa2.39□□□□□ -2.03
VPS55YJR044C RPN13O13563 156 aa2.38□□□□□ -2.03
VPS55YJR044C TOP3P13099 656 aa2.38□□□□□ -2.03
VPS55YJR044C PTP1P25044 335 aa2.38□□□□□ -2.03
VPS55YJR044C SFB3P38810 929 aa2.38□□□□□ -2.03
VPS55YJR044C BDH2P39713 417 aa2.38□□□□□ -2.03
VPS55YJR044C MAD1P40957 749 aa2.38□□□□□ -2.03
VPS55YJR044C BAP3P41815 604 aa2.38□□□□□ -2.03
VPS55YJR044C BNA3P47039 444 aaKnown RBP2.38□□□□□ -2.03
VPS55YJR044C BPL1P48445 690 aaPredicted RBP2.38□□□□□ -2.03
VPS55YJR044C UBC9P50623 157 aaPredicted RBP2.38□□□□□ -2.03
VPS55YJR044C PAN2P53010 1115 aaPredicted RBP2.38□□□□□ -2.03
VPS55YJR044C TAD1P53065 400 aa2.38□□□□□ -2.03
VPS55YJR044C TEX1P53851 422 aaKnown RBP2.38□□□□□ -2.03
VPS55YJR044C RSC3Q06639 885 aa2.38□□□□□ -2.03
VPS55YJR044C PIN2Q12057 282 aa2.38□□□□□ -2.03
VPS55YJR044C RGT2Q12300 763 aa2.38□□□□□ -2.03
VPS55YJR044C PHR1P05066 565 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VPS55YJR044C SIR3P06701 978 aa2.37□□□□□ -2.03
VPS55YJR044C PYC1P11154 1178 aaKnown RBP2.37□□□□□ -2.03
VPS55YJR044C MSD1P15179 658 aaKnown RBP2.37□□□□□ -2.03
VPS55YJR044C YUR1P26725 428 aa2.37□□□□□ -2.03
VPS55YJR044C GLG1P36143 616 aa2.37□□□□□ -2.03
VPS55YJR044C HRB1P38922 454 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
VPS55YJR044C REV7P38927 245 aa2.37□□□□□ -2.03
VPS55YJR044C XBP1P40489 647 aa2.37□□□□□ -2.03
VPS55YJR044C IRR1P40541 1150 aa2.37□□□□□ -2.03
VPS55YJR044C ALR2P43553 858 aa2.37□□□□□ -2.03
VPS55YJR044C PFD1P46988 109 aa2.37□□□□□ -2.03
VPS55YJR044C CTR1P49573 406 aa2.37□□□□□ -2.03
VPS55YJR044C YAP1802P53309 568 aa2.37□□□□□ -2.03
VPS55YJR044C NOG2P53742 486 aaKnown RBP2.37□□□□□ -2.03
VPS55YJR044C TDA9Q04545 1251 aa2.37□□□□□ -2.03
VPS55YJR044C RGC1Q06108 1083 aaKnown RBP2.37□□□□□ -2.03
VPS55YJR044C YKL033W-AQ86ZR7 236 aa2.37□□□□□ -2.03
VPS55YJR044C NUP1P20676 1076 aa2.36□□□□□ -2.03
VPS55YJR044C SAP190P36123 1033 aa2.36□□□□□ -2.03
VPS55YJR044C YBR184WP38299 523 aa2.36□□□□□ -2.03
VPS55YJR044C PAC2P39937 518 aa2.36□□□□□ -2.03
VPS55YJR044C NET1P47035 1189 aa2.36□□□□□ -2.03
VPS55YJR044C MTL1P53214 551 aa2.36□□□□□ -2.03
VPS55YJR044C GAD1Q04792 585 aa2.36□□□□□ -2.03
VPS55YJR044C UBX5Q06682 500 aa2.36□□□□□ -2.03
VPS55YJR044C PRP9P19736 530 aaKnown RBP2.35□□□□□ -2.03
VPS55YJR044C MVD1P32377 396 aaKnown RBP2.35□□□□□ -2.03
VPS55YJR044C PET10P36139 283 aa2.35□□□□□ -2.03
VPS55YJR044C FMO1P38866 432 aa2.35□□□□□ -2.03
VPS55YJR044C CCT3P39077 534 aaKnown RBP2.35□□□□□ -2.03
VPS55YJR044C ARG2P40360 574 aa2.35□□□□□ -2.03
VPS55YJR044C MTR3P48240 250 aaPredicted RBP2.35□□□□□ -2.03
VPS55YJR044C MPS1P54199 764 aa2.35□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms