RNA–Protein interactions for RNA: YIL084C

SDS3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene SDS3, Length 984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDS3YIL084C CMP2P14747 604 aa5.42□□□□□ -1.54
SDS3YIL084C ECM21P38167 1117 aaKnown RBP5.42□□□□□ -1.54
SDS3YIL084C HSV2P50079 448 aaPredicted RBP5.42□□□□□ -1.54
SDS3YIL084C SNO2P53823 222 aa5.42□□□□□ -1.54
SDS3YIL084C RIA1P53893 1110 aa5.42□□□□□ -1.54
SDS3YIL084C MSC2Q03455 724 aa5.42□□□□□ -1.54
SDS3YIL084C BUL2Q03758 920 aaKnown RBP5.42□□□□□ -1.54
SDS3YIL084C ENT1Q12518 454 aa5.42□□□□□ -1.54
SDS3YIL084C BCK1Q01389 1478 aa5.41□□□□□ -1.54
SDS3YIL084C CYC1P00044 109 aaPredicted RBP5.41□□□□□ -1.54
SDS3YIL084C ALG2P43636 503 aa5.41□□□□□ -1.54
SDS3YIL084C NIT3P49954 291 aa5.41□□□□□ -1.54
SDS3YIL084C SFB2P53953 876 aa5.41□□□□□ -1.54
SDS3YIL084C RIB2Q12362 591 aaKnown RBP5.41□□□□□ -1.54
SDS3YIL084C ENA1P13587 1091 aa5.4□□□□□ -1.54
SDS3YIL084C ERT1P38140 529 aa5.4□□□□□ -1.54
SDS3YIL084C YBR238CP38330 731 aaKnown RBP5.4□□□□□ -1.54
SDS3YIL084C GDH3P39708 457 aa5.4□□□□□ -1.54
SDS3YIL084C NPP2P39997 493 aa5.4□□□□□ -1.54
SDS3YIL084C ENA2Q01896 1091 aa5.4□□□□□ -1.54
SDS3YIL084C XYL2Q07993 356 aa5.4□□□□□ -1.54
SDS3YIL084C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
SDS3YIL084C ENA5Q12691 1091 aa5.4□□□□□ -1.54
SDS3YIL084C YRF1-2P40105 1681 aa5.4□□□□□ -1.55
SDS3YIL084C TUB2P02557 457 aaKnown RBP5.39□□□□□ -1.55
SDS3YIL084C PHR1P05066 565 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SDS3YIL084C PRE10P21242 288 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55not detected
SDS3YIL084C RFA1P22336 621 aaKnown RBP5.39□□□□□ -1.55
SDS3YIL084C BRN1P38170 754 aa5.39□□□□□ -1.55
SDS3YIL084C FPR3P38911 411 aaKnown RBP5.39□□□□□ -1.55
SDS3YIL084C ZRG8P40021 1076 aa5.39□□□□□ -1.55
SDS3YIL084C YKE2P52553 114 aa5.39□□□□□ -1.55
SDS3YIL084C DAM1P53267 343 aa5.39□□□□□ -1.55
SDS3YIL084C VPS30Q02948 557 aa5.39□□□□□ -1.55
SDS3YIL084C GAL10P04397 699 aa5.38□□□□□ -1.55
SDS3YIL084C MPH2P0CD99 609 aa5.38□□□□□ -1.55
SDS3YIL084C HSF1P10961 833 aa5.38□□□□□ -1.55
SDS3YIL084C MSH2P25847 964 aa5.38□□□□□ -1.55
SDS3YIL084C PSP2P50109 593 aaKnown RBP5.38□□□□□ -1.55
SDS3YIL084C YGR012WP53206 393 aa5.38□□□□□ -1.55
SDS3YIL084C PBP1P53297 722 aaKnown RBP5.38□□□□□ -1.55
SDS3YIL084C DOS2P54858 310 aa5.38□□□□□ -1.55
SDS3YIL084C UTP14Q04500 899 aaKnown RBP5.38□□□□□ -1.55
SDS3YIL084C SGD1Q06132 899 aa5.38□□□□□ -1.55
SDS3YIL084C YLR358CO13565 187 aa5.37□□□□□ -1.55
SDS3YIL084C RPP2AP05319 106 aaKnown RBP5.37□□□□□ -1.55
SDS3YIL084C RAD53P22216 821 aa5.37□□□□□ -1.55
SDS3YIL084C GSY1P23337 708 aa5.37□□□□□ -1.55
SDS3YIL084C SRP101P32916 621 aa5.37□□□□□ -1.55
SDS3YIL084C UGO1Q03327 502 aa5.37□□□□□ -1.55
SDS3YIL084C YDR132CQ03900 495 aa5.37□□□□□ -1.55
SDS3YIL084C IMH1Q06704 911 aaKnown RBP5.37□□□□□ -1.55
SDS3YIL084C NOT3P06102 836 aaKnown RBP5.36□□□□□ -1.55
SDS3YIL084C EMC3P36039 253 aa5.36□□□□□ -1.55
SDS3YIL084C MNN1P39106 762 aa5.36□□□□□ -1.55
SDS3YIL084C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SDS3YIL084C RAI1P53063 387 aaKnown RBP5.36□□□□□ -1.55
SDS3YIL084C YNR029CP53729 429 aaKnown RBP5.36□□□□□ -1.55
SDS3YIL084C ENV7Q12003 364 aa5.36□□□□□ -1.55
SDS3YIL084C PNS1Q12412 539 aa5.36□□□□□ -1.55
SDS3YIL084C RRP5Q05022 1729 aaKnown RBP5.35□□□□□ -1.55
SDS3YIL084C SRM1P21827 482 aa5.35□□□□□ -1.55
SDS3YIL084C SPC29P33419 253 aa5.35□□□□□ -1.55
SDS3YIL084C SPC42P36094 363 aa5.35□□□□□ -1.55
SDS3YIL084C POA1P38218 177 aa5.35□□□□□ -1.55
SDS3YIL084C LAM1P38851 1228 aa5.35□□□□□ -1.55
SDS3YIL084C MND2P40577 368 aa5.35□□□□□ -1.55
SDS3YIL084C YGR283CP53336 341 aaPredicted RBP5.35□□□□□ -1.55
SDS3YIL084C ROT1Q03691 256 aa5.35□□□□□ -1.55
SDS3YIL084C YDR514CQ04408 483 aa5.35□□□□□ -1.55
SDS3YIL084C CDA1Q06702 301 aa5.35□□□□□ -1.55
SDS3YIL084C GCN2P15442 1659 aa5.34□□□□□ -1.55
SDS3YIL084C RPS9AO13516 197 aaKnown RBP5.34□□□□□ -1.55
SDS3YIL084C PEX6P33760 1030 aa5.34□□□□□ -1.55
SDS3YIL084C STE13P33894 931 aa5.34□□□□□ -1.55
SDS3YIL084C ATG19P35193 415 aa5.34□□□□□ -1.55
SDS3YIL084C DSS1P39112 969 aa5.34□□□□□ -1.55
SDS3YIL084C GYP8P43570 497 aa5.34□□□□□ -1.55
SDS3YIL084C MAL11P53048 616 aa5.34□□□□□ -1.55
SDS3YIL084C NOG2P53742 486 aaKnown RBP5.34□□□□□ -1.55
SDS3YIL084C REH1Q06709 432 aa5.34□□□□□ -1.55
SDS3YIL084C MDM12Q92328 271 aa5.34□□□□□ -1.55
SDS3YIL084C TY3B-IQ7LHG5 1498 aaKnown RBP5.33□□□□□ -1.56
SDS3YIL084C URA1P28272 314 aaPredicted RBP5.33□□□□□ -1.56
SDS3YIL084C CEP3P40969 608 aa5.33□□□□□ -1.56
SDS3YIL084C GTF1P53260 183 aaPredicted RBP5.33□□□□□ -1.56
SDS3YIL084C SLI1P53304 468 aa5.33□□□□□ -1.56
SDS3YIL084C ATP25Q03153 612 aa5.33□□□□□ -1.56
SDS3YIL084C RXT3Q07458 294 aa5.33□□□□□ -1.56
SDS3YIL084C NTG2Q08214 380 aa5.33□□□□□ -1.56
SDS3YIL084C CFT1Q06632 1357 aaKnown RBP5.32□□□□□ -1.56
SDS3YIL084C SPE1P08432 466 aa5.32□□□□□ -1.56
SDS3YIL084C SFP1P32432 683 aa5.32□□□□□ -1.56
SDS3YIL084C TYE7P33122 291 aaPredicted RBP5.32□□□□□ -1.56
SDS3YIL084C MPT5P39016 859 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56 RIP-Chip
SDS3YIL084C MEF2P39677 819 aa5.32□□□□□ -1.56
SDS3YIL084C SPT20P50875 604 aa5.32□□□□□ -1.56
SDS3YIL084C PLB2Q03674 706 aa5.32□□□□□ -1.56
SDS3YIL084C TPO1Q07824 586 aa5.32□□□□□ -1.56
SDS3YIL084C MET7Q08645 548 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 54.7 ms