RNA–Protein interactions for RNA: YGR150C

CCM1, Transcript of Mitochondrial 15S rRNA-binding protein, yeast

Gene CCM1, Length 2,595 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCM1	YGR150C	FRK1	Q03002	865 aa	Predicted RBP	3.68	□□□□□ -1.82
CCM1	YGR150C	ATP25	Q03153	612 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	GYP1	Q08484	637 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	RVB2	Q12464	471 aa	Known RBP	3.68	□□□□□ -1.82
CCM1	YGR150C	KCS1	Q12494	1050 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	STF1	P01098	86 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	DAL1	P32375	460 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	NGG1	P32494	702 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	NPR3	P38742	1146 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	SPC72	P39723	622 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	IMA5	P40884	581 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	GUP1	P53154	560 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	NCS2	P53923	493 aa	Predicted RBP	3.68	□□□□□ -1.82
CCM1	YGR150C	DUS3	Q06053	668 aa	Known RBP	3.68	□□□□□ -1.82
CCM1	YGR150C	YCG1	Q06680	1035 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	MDM38	Q08179	573 aa		3.68	□□□□□ -1.82
CCM1	YGR150C	CUE5	Q08412	411 aa	Known RBP	3.68	□□□□□ -1.82
CCM1	YGR150C	RPS31	P05759	152 aa	Known RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	CDC16	P09798	840 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	HCA4	P20448	770 aa	Known RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	TRX1	P22217	103 aa	Known RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	MLS1	P30952	554 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	CCR4	P31384	837 aa	Known RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	SLA1	P32790	1244 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	AFR1	P33304	620 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	BCK2	P33306	851 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	ERT1	P38140	529 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	HSL7	P38274	827 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	DUN1	P39009	513 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	HNT2	P49775	206 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	ARE2	P53629	642 aa	Known RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	EAR1	Q03212	550 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	DFG5	Q05031	458 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	VID22	Q05934	901 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	HFI1	Q12060	488 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	NCR1	Q12200	1170 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	APM4	Q99186	491 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	MTF2	P10849	440 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	PMS1	P14242	873 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	GUK1	P15454	187 aa	Known RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	RTG1	P32607	177 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	PPE1	P38796	400 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	LAM1	P38851	1228 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	DLD3	P39976	496 aa	Known RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	SPO74	P45819	413 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	ELA1	P53861	379 aa	Predicted RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	SSL2	Q00578	843 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	PTA1	Q01329	785 aa	Predicted RBP	3.67	□□□□□ -1.82
CCM1	YGR150C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.67	□□□□□ -1.82	not detected
CCM1	YGR150C	MRPL13	Q02204	264 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	YPL071C	Q02864	156 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	NHX1	Q04121	633 aa		3.67	□□□□□ -1.82
CCM1	YGR150C	ADE8	P04161	214 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	REC107	P21651	314 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	YCL049C	P25577	312 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	POL4	P25615	582 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	ERG3	P32353	365 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	ESL2	P36168	1195 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	YRO2	P38079	344 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	APM3	P38153	483 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	YBR225W	P38321	900 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	VPS41	P38959	992 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	TOK1	P40310	691 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	MAD3	P47074	515 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	CBK1	P53894	756 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	HAP5	Q02516	242 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	HOT1	Q03213	719 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	YMR155W	Q03795	547 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	YHM2	Q04013	314 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	OMS1	Q06668	471 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	MET7	Q08645	548 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	TRM8	Q12009	286 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	NUR1	Q12066	484 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	REX3	Q12090	404 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	RRP36	Q12481	300 aa	Predicted RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	RPS21B	Q3E754	87 aa	Known RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	RPC40	P07703	335 aa	Known RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	CKA1	P15790	372 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	NCP1	P16603	691 aa	Known RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	ATP12	P22135	325 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	MIH1	P23748	554 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	REC104	P33323	182 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	OAF3	P36023	863 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	ADD66	P36040	267 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	YER010C	P40011	234 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	CIR1	P42940	261 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	MDE1	P47095	244 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	BNA2	P47125	453 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	UTP22	P53254	1237 aa	Predicted RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	DAM1	P53267	343 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	CPR6	P53691	371 aa	Known RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	VPS9	P54787	451 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	PRP42	Q03776	544 aa	Known RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	MFB1	Q04922	465 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	TFC6	Q06339	672 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	RSC2	Q06488	889 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	YLH47	Q06493	454 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	GNT1	Q12096	491 aa		3.66	□□□□□ -1.82
CCM1	YGR150C	CFT2	Q12102	859 aa	Predicted RBP	3.66	□□□□□ -1.82
CCM1	YGR150C	LEU2	P04173	364 aa	Predicted RBP	3.65	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms