RNA–Protein interactions for RNA: YGL197W

MDS3, Transcript of Putative component of the TOR regulatory pathway, yeastyeast

Gene MDS3, Length 4,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDS3YGL197W PLB2Q03674 706 aa1.94□□□□□ -2.1
MDS3YGL197W RIB2Q12362 591 aaKnown RBP1.94□□□□□ -2.1
MDS3YGL197W GEA1P47102 1408 aaPredicted RBP1.93□□□□□ -2.1
MDS3YGL197W TRP2P00899 507 aaKnown RBP1.93□□□□□ -2.1
MDS3YGL197W DED1P06634 604 aaKnown RBP1.93□□□□□ -2.1
MDS3YGL197W INO1P11986 533 aa1.93□□□□□ -2.1
MDS3YGL197W ERG4P25340 473 aa1.93□□□□□ -2.1
MDS3YGL197W ATF1P40353 525 aa1.93□□□□□ -2.1
MDS3YGL197W YGR053CP53234 283 aa1.93□□□□□ -2.1
MDS3YGL197W NOG2P53742 486 aaKnown RBP1.93□□□□□ -2.1
MDS3YGL197W KCS1Q12494 1050 aa1.93□□□□□ -2.1
MDS3YGL197W GCR1P07261 785 aa1.93□□□□□ -2.1
MDS3YGL197W CTF8P38877 133 aa1.93□□□□□ -2.1
MDS3YGL197W SAH1P39954 449 aaKnown RBP1.93□□□□□ -2.1
MDS3YGL197W YIL166CP40445 542 aa1.93□□□□□ -2.1
MDS3YGL197W YKE2P52553 114 aa1.93□□□□□ -2.1
MDS3YGL197W RAT1Q02792 1006 aaKnown RBP1.93□□□□□ -2.1
MDS3YGL197W HOF1Q05080 669 aa1.93□□□□□ -2.1
MDS3YGL197W REH1Q06709 432 aa1.93□□□□□ -2.1
MDS3YGL197W FKS1P38631 1876 aaKnown RBP1.93□□□□□ -2.1
MDS3YGL197W LTP1P40347 161 aa1.93□□□□□ -2.1
MDS3YGL197W SUN4P53616 420 aa1.93□□□□□ -2.1
MDS3YGL197W LCD1Q04377 747 aa1.93□□□□□ -2.1
MDS3YGL197W SWM1Q12379 170 aa1.93□□□□□ -2.1
MDS3YGL197W RPS26AP39938 119 aaKnown RBP1.92□□□□□ -2.1
MDS3YGL197W RPS26BP39939 119 aaKnown RBP1.92□□□□□ -2.1
MDS3YGL197W SDP1P40479 209 aa1.92□□□□□ -2.1
MDS3YGL197W HSV2P50079 448 aaPredicted RBP1.92□□□□□ -2.1
MDS3YGL197W SEC5P89102 971 aa1.92□□□□□ -2.1
MDS3YGL197W APM1Q00776 475 aaPredicted RBP1.92□□□□□ -2.1
MDS3YGL197W UPC2Q12151 913 aa1.92□□□□□ -2.1
MDS3YGL197W WHI5Q12416 295 aa1.92□□□□□ -2.1
MDS3YGL197W APT2P36973 181 aa1.92□□□□□ -2.1
MDS3YGL197W SNU71P53207 620 aaKnown RBP1.92□□□□□ -2.1
MDS3YGL197W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
MDS3YGL197W HEM13P11353 328 aaKnown RBP1.92□□□□□ -2.1
MDS3YGL197W GIC1P38785 314 aa1.92□□□□□ -2.1
MDS3YGL197W ADY4Q05955 493 aa1.92□□□□□ -2.1
MDS3YGL197W IRR1P40541 1150 aa1.91□□□□□ -2.1
MDS3YGL197W YIR042CP40586 236 aa1.91□□□□□ -2.1
MDS3YGL197W DYN1P36022 4092 aa1.91□□□□□ -2.1
MDS3YGL197W CAF20P12962 161 aaKnown RBP1.91□□□□□ -2.1
MDS3YGL197W SRM1P21827 482 aa1.91□□□□□ -2.1
MDS3YGL197W RFA1P22336 621 aaKnown RBP1.91□□□□□ -2.1
MDS3YGL197W CTF13P35203 478 aa1.91□□□□□ -2.1
MDS3YGL197W MAD1P40957 749 aa1.91□□□□□ -2.1
MDS3YGL197W MTC3P53077 123 aa1.91□□□□□ -2.1
MDS3YGL197W NAB6Q03735 1134 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
MDS3YGL197W COG8Q04632 607 aa1.91□□□□□ -2.1
MDS3YGL197W RRP15Q06511 250 aaPredicted RBP1.91□□□□□ -2.1
MDS3YGL197W YOL073CQ08232 322 aa1.91□□□□□ -2.1
MDS3YGL197W PIN2Q12057 282 aa1.91□□□□□ -2.1
MDS3YGL197W YNL162W-AQ3E7A8 72 aa1.91□□□□□ -2.1
MDS3YGL197W MPH2P0CD99 609 aa1.91□□□□□ -2.1
MDS3YGL197W TYE7P33122 291 aaPredicted RBP1.91□□□□□ -2.1
MDS3YGL197W GGA2P38817 585 aaKnown RBP1.91□□□□□ -2.1
MDS3YGL197W SPO75Q07798 868 aa1.91□□□□□ -2.1
MDS3YGL197W FBP1P09201 348 aa1.91□□□□□ -2.1
MDS3YGL197W GTF1P53260 183 aaPredicted RBP1.91□□□□□ -2.1
MDS3YGL197W CAT8P39113 1433 aa1.9□□□□□ -2.1
MDS3YGL197W KAR4P25583 335 aa1.9□□□□□ -2.1
MDS3YGL197W STE13P33894 931 aa1.9□□□□□ -2.1
MDS3YGL197W YBR259WP38338 688 aa1.9□□□□□ -2.1
MDS3YGL197W SUL1P38359 859 aa1.9□□□□□ -2.1
MDS3YGL197W YPR196WQ06595 470 aa1.9□□□□□ -2.1
MDS3YGL197W YML133CQ03099 1374 aa1.9□□□□□ -2.1
MDS3YGL197W YLL067CQ07888 1374 aa1.9□□□□□ -2.1
MDS3YGL197W YLL066CQ99208 1374 aa1.9□□□□□ -2.1
MDS3YGL197W ELO3P40319 345 aa1.9□□□□□ -2.11
MDS3YGL197W PUS2P53167 370 aa1.9□□□□□ -2.11
MDS3YGL197W SSL2Q00578 843 aa1.9□□□□□ -2.11
MDS3YGL197W SGO1Q08490 590 aa1.9□□□□□ -2.11
MDS3YGL197W VPS13Q07878 3144 aa1.9□□□□□ -2.11
MDS3YGL197W PPH3P32345 308 aa1.9□□□□□ -2.11
MDS3YGL197W UGA4P32837 571 aa1.9□□□□□ -2.11
MDS3YGL197W SRP101P32916 621 aa1.9□□□□□ -2.11
MDS3YGL197W YGL176CP46945 554 aa1.9□□□□□ -2.11
MDS3YGL197W DUS3Q06053 668 aaKnown RBP1.9□□□□□ -2.11
MDS3YGL197W IPL1P38991 367 aa1.89□□□□□ -2.11
MDS3YGL197W SIP5P40210 489 aaKnown RBP1.89□□□□□ -2.11
MDS3YGL197W ARG2P40360 574 aa1.89□□□□□ -2.11
MDS3YGL197W PEX19Q07418 342 aa1.89□□□□□ -2.11
MDS3YGL197W RPS9AO13516 197 aaKnown RBP1.89□□□□□ -2.11
MDS3YGL197W AAR2P32357 355 aaPredicted RBP1.89□□□□□ -2.11
MDS3YGL197W FMP52P40008 231 aa1.89□□□□□ -2.11
MDS3YGL197W ZDS1P50111 915 aaKnown RBP1.89□□□□□ -2.11
MDS3YGL197W MRK1P50873 501 aa1.89□□□□□ -2.11
MDS3YGL197W ERP6P53198 216 aa1.89□□□□□ -2.11
MDS3YGL197W PMD1P32634 1753 aa1.89□□□□□ -2.11
MDS3YGL197W ALG7P07286 448 aa1.89□□□□□ -2.11
MDS3YGL197W STE14P32584 239 aa1.89□□□□□ -2.11
MDS3YGL197W REV7P38927 245 aa1.89□□□□□ -2.11
MDS3YGL197W IMO32P53219 342 aa1.89□□□□□ -2.11
MDS3YGL197W KIN4Q01919 800 aa1.89□□□□□ -2.11
MDS3YGL197W YML122CQ03207 126 aa1.89□□□□□ -2.11
MDS3YGL197W PKH1Q03407 766 aa1.89□□□□□ -2.11
MDS3YGL197W IKI3Q06706 1349 aaKnown RBP1.89□□□□□ -2.11
MDS3YGL197W XYL2Q07993 356 aa1.89□□□□□ -2.11
MDS3YGL197W NOT3P06102 836 aaKnown RBP1.89□□□□□ -2.11
MDS3YGL197W TUB1P09733 447 aaKnown RBP1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms