RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W INA22P40576 216 aa7.13□□□□□ -1.27
RGD2YFL047W TAM41P53230 385 aa7.13□□□□□ -1.27
RGD2YFL047W RIB2Q12362 591 aaKnown RBP7.13□□□□□ -1.27
RGD2YFL047W HIF1Q12373 385 aa7.13□□□□□ -1.27
RGD2YFL047W JIP3O13555 125 aa7.12□□□□□ -1.27
RGD2YFL047W CDC33P07260 213 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W RPB2P08518 1224 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W TCP1P12612 559 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W POL3P15436 1097 aa7.12□□□□□ -1.27
RGD2YFL047W CBF1P17106 351 aa7.12□□□□□ -1.27
RGD2YFL047W DBP5P20449 482 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W RRN6P32786 894 aa7.12□□□□□ -1.27
RGD2YFL047W PTC3P34221 468 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W YER156CP40093 338 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W ASG1P40467 964 aa7.12□□□□□ -1.27
RGD2YFL047W CLA4P48562 842 aa7.12□□□□□ -1.27
RGD2YFL047W YDR222WQ04925 415 aa7.12□□□□□ -1.27
RGD2YFL047W DON1Q05610 365 aa7.12□□□□□ -1.27
RGD2YFL047W NOB1Q08444 459 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W TAF10Q12030 206 aa7.12□□□□□ -1.27
RGD2YFL047W GSC2P40989 1895 aa7.12□□□□□ -1.27
RGD2YFL047W SRV2P17555 526 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W MSM1P22438 575 aa7.12□□□□□ -1.27
RGD2YFL047W MUD1P32605 298 aaKnown RBP7.12□□□□□ -1.27
RGD2YFL047W TFC4P33339 1025 aa7.12□□□□□ -1.27
RGD2YFL047W RIM101P33400 625 aa7.12□□□□□ -1.27
RGD2YFL047W MSG5P38590 489 aa7.12□□□□□ -1.27
RGD2YFL047W ACA1P39970 489 aa7.12□□□□□ -1.27
RGD2YFL047W TDA10P42938 290 aa7.12□□□□□ -1.27
RGD2YFL047W FAR8Q05040 523 aa7.12□□□□□ -1.27
RGD2YFL047W YLR177WQ06251 628 aa7.12□□□□□ -1.27
RGD2YFL047W CRD1Q07560 283 aa7.12□□□□□ -1.27
RGD2YFL047W SAM1P10659 382 aaKnown RBP7.11□□□□□ -1.27
RGD2YFL047W GAL11P19659 1081 aa7.11□□□□□ -1.27
RGD2YFL047W YBL055CP34220 418 aaPredicted RBP7.11□□□□□ -1.27
RGD2YFL047W SPC72P39723 622 aa7.11□□□□□ -1.27
RGD2YFL047W SUB1P54000 292 aaKnown RBP7.11□□□□□ -1.27
RGD2YFL047W PTA1Q01329 785 aaPredicted RBP7.11□□□□□ -1.27
RGD2YFL047W YML037CQ03703 340 aa7.11□□□□□ -1.27
RGD2YFL047W CMS1Q07897 291 aaKnown RBP7.11□□□□□ -1.27
RGD2YFL047W CDC53Q12018 815 aaKnown RBP7.11□□□□□ -1.27
RGD2YFL047W CBP1P07252 654 aa7.1□□□□□ -1.27
RGD2YFL047W DAL2P25335 343 aa7.1□□□□□ -1.27
RGD2YFL047W SQT1P35184 431 aa7.1□□□□□ -1.27
RGD2YFL047W YKR018CP36114 725 aa7.1□□□□□ -1.27
RGD2YFL047W HEK2P38199 381 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
RGD2YFL047W VHC1P38329 1120 aa7.1□□□□□ -1.27
RGD2YFL047W YTA12P40341 825 aa7.1□□□□□ -1.27
RGD2YFL047W YGR111WP53265 400 aa7.1□□□□□ -1.27
RGD2YFL047W RPL22BP56628 122 aaKnown RBP7.1□□□□□ -1.27
RGD2YFL047W HOT1Q03213 719 aa7.1□□□□□ -1.27
RGD2YFL047W ATG16Q03818 150 aa7.1□□□□□ -1.27
RGD2YFL047W GUD1Q07729 489 aa7.1□□□□□ -1.27
RGD2YFL047W BAS1P22035 811 aa7.1□□□□□ -1.27
RGD2YFL047W DBF4P32325 704 aa7.1□□□□□ -1.27
RGD2YFL047W NIP1P32497 812 aaKnown RBP7.1□□□□□ -1.27
RGD2YFL047W NIT1P40447 199 aa7.1□□□□□ -1.27
RGD2YFL047W DAS1P47005 663 aa7.1□□□□□ -1.27
RGD2YFL047W YPL109CQ02981 657 aa7.1□□□□□ -1.27
RGD2YFL047W SPH1Q06160 661 aa7.1□□□□□ -1.27
RGD2YFL047W MAG2Q06436 670 aaKnown RBP7.1□□□□□ -1.27
RGD2YFL047W ARD1P07347 238 aaPredicted RBP7.09□□□□□ -1.27
RGD2YFL047W HEM15P16622 393 aa7.09□□□□□ -1.27
RGD2YFL047W HPR1P17629 752 aaKnown RBP7.09□□□□□ -1.27
RGD2YFL047W PRP4P20053 465 aaKnown RBP7.09□□□□□ -1.27
RGD2YFL047W SWH1P35845 1188 aa7.09□□□□□ -1.27
RGD2YFL047W SSP1P38871 571 aa7.09□□□□□ -1.27
RGD2YFL047W AVT1P47082 602 aa7.09□□□□□ -1.27
RGD2YFL047W YML119WQ03208 357 aa7.09□□□□□ -1.27
RGD2YFL047W VPS16Q03308 798 aa7.09□□□□□ -1.27
RGD2YFL047W ATG20Q07528 640 aa7.09□□□□□ -1.27
RGD2YFL047W PUF3Q07807 879 aaKnown RBP RIP-Chip data7.09□□□□□ -1.27not detected
RGD2YFL047W ILV2P07342 687 aaKnown RBP7.09□□□□□ -1.28
RGD2YFL047W YML002WP0CF17 737 aa7.09□□□□□ -1.28
RGD2YFL047W SPO16P17122 198 aa7.09□□□□□ -1.28
RGD2YFL047W IME1P21190 360 aa7.09□□□□□ -1.28
RGD2YFL047W SHP1P34223 423 aa7.09□□□□□ -1.28
RGD2YFL047W PHO86P46956 311 aa7.09□□□□□ -1.28
RGD2YFL047W TMA22P47089 198 aaPredicted RBP7.09□□□□□ -1.28
RGD2YFL047W YGR117CP53270 476 aa7.09□□□□□ -1.28
RGD2YFL047W SHR3Q02774 210 aa7.09□□□□□ -1.28
RGD2YFL047W PPM1Q04081 328 aa7.09□□□□□ -1.28
RGD2YFL047W GCR1P07261 785 aa7.08□□□□□ -1.28
RGD2YFL047W SFL1P20134 766 aa7.08□□□□□ -1.28
RGD2YFL047W PEX2P32800 271 aa7.08□□□□□ -1.28
RGD2YFL047W ATG19P35193 415 aa7.08□□□□□ -1.28
RGD2YFL047W CSG2P35206 410 aa7.08□□□□□ -1.28
RGD2YFL047W MRX3P38172 270 aa7.08□□□□□ -1.28
RGD2YFL047W YMR134WP40207 237 aa7.08□□□□□ -1.28
RGD2YFL047W CPR7P47103 393 aa7.08□□□□□ -1.28
RGD2YFL047W YJR142WP47173 342 aa7.08□□□□□ -1.28
RGD2YFL047W ZIP2P53061 704 aa7.08□□□□□ -1.28
RGD2YFL047W SPC24Q04477 213 aa7.08□□□□□ -1.28
RGD2YFL047W UFO1Q04511 668 aa7.08□□□□□ -1.28
RGD2YFL047W DUS3Q06053 668 aaKnown RBP7.08□□□□□ -1.28
RGD2YFL047W TDA5Q06417 326 aaKnown RBP7.08□□□□□ -1.28
RGD2YFL047W FBP1P09201 348 aa7.07□□□□□ -1.28
RGD2YFL047W RNA1P11745 407 aaKnown RBP7.07□□□□□ -1.28
RGD2YFL047W CDC42P19073 191 aa7.07□□□□□ -1.28
RGD2YFL047W PIN4P34217 668 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
Retrieved 100 of 5,963 RNA–protein pairs in 50.4 ms