RNA–Protein interactions for RNA: YER017C

AFG3, Transcript of Mitochondrial inner membrane m-AAA protease component, yeast

Gene AFG3, Length 2,286 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG3	YER017C	YHL049C	P38722	271 aa		7.71	□□□□□ -1.18
AFG3	YER017C	YEL075C	P39972	122 aa		7.71	□□□□□ -1.18
AFG3	YER017C	YER189W	P40104	122 aa		7.71	□□□□□ -1.18
AFG3	YER017C	YNL320W	P42840	284 aa		7.71	□□□□□ -1.18
AFG3	YER017C	YFL064C	P43540	174 aa		7.71	□□□□□ -1.18
AFG3	YER017C	RPS0B	P46654	252 aa	Known RBP	7.71	□□□□□ -1.18
AFG3	YER017C	YJR079W	P47126	109 aa		7.71	□□□□□ -1.18
AFG3	YER017C	RTT102	P53330	157 aa		7.71	□□□□□ -1.18
AFG3	YER017C	ROD1	Q02805	837 aa		7.71	□□□□□ -1.18
AFG3	YER017C	CDC53	Q12018	815 aa	Known RBP	7.71	□□□□□ -1.18
AFG3	YER017C	YBL111C	Q3E7Y5	667 aa		7.71	□□□□□ -1.18
AFG3	YER017C	UBC6	P33296	250 aa	Predicted RBP	7.7	□□□□□ -1.18
AFG3	YER017C	TVP38	P36164	337 aa		7.7	□□□□□ -1.18
AFG3	YER017C	HMF1	P40037	129 aa	Known RBP	7.7	□□□□□ -1.18
AFG3	YER017C	ATG36	P46983	293 aa		7.7	□□□□□ -1.18
AFG3	YER017C	TBF1	Q02457	562 aa		7.7	□□□□□ -1.18
AFG3	YER017C	YDR278C	Q05612	105 aa		7.7	□□□□□ -1.18
AFG3	YER017C	RGA2	Q06407	1009 aa		7.7	□□□□□ -1.18
AFG3	YER017C	VMA1	P17255	1071 aa	Known RBP	7.69	□□□□□ -1.18
AFG3	YER017C	DAL2	P25335	343 aa		7.69	□□□□□ -1.18
AFG3	YER017C	SEC21	P32074	935 aa	Known RBP	7.69	□□□□□ -1.18
AFG3	YER017C	NCL1	P38205	684 aa	Known RBP	7.69	□□□□□ -1.18
AFG3	YER017C	GPB2	P39717	880 aa		7.69	□□□□□ -1.18
AFG3	YER017C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	7.69	□□□□□ -1.18	not detected
AFG3	YER017C	VPS70	P47161	811 aa		7.69	□□□□□ -1.18
AFG3	YER017C	RIM8	P53179	542 aa		7.69	□□□□□ -1.18
AFG3	YER017C	GPI13	Q07830	1017 aa		7.69	□□□□□ -1.18
AFG3	YER017C	IES4	Q08561	116 aa		7.69	□□□□□ -1.18
AFG3	YER017C	RIO1	Q12196	484 aa	Known RBP	7.69	□□□□□ -1.18
AFG3	YER017C	CDC19	P00549	500 aa	Known RBP	7.69	□□□□□ -1.18
AFG3	YER017C	ARG4	P04076	463 aa	Predicted RBP	7.69	□□□□□ -1.18
AFG3	YER017C	PRP9	P19736	530 aa	Known RBP	7.69	□□□□□ -1.18
AFG3	YER017C	MRX3	P38172	270 aa		7.69	□□□□□ -1.18
AFG3	YER017C	YGR125W	P53273	1036 aa		7.69	□□□□□ -1.18
AFG3	YER017C	EEB1	Q02891	456 aa		7.69	□□□□□ -1.18
AFG3	YER017C	YDR461C-A	Q2V2P7	80 aa		7.69	□□□□□ -1.18
AFG3	YER017C	IME1	P21190	360 aa		7.68	□□□□□ -1.18
AFG3	YER017C	SPC72	P39723	622 aa		7.68	□□□□□ -1.18
AFG3	YER017C	EAF5	P39995	279 aa		7.68	□□□□□ -1.18
AFG3	YER017C	CPR7	P47103	393 aa		7.68	□□□□□ -1.18
AFG3	YER017C	YDR090C	Q03193	310 aa		7.68	□□□□□ -1.18
AFG3	YER017C	PUS5	Q06244	254 aa		7.68	□□□□□ -1.18
AFG3	YER017C	OSW2	Q12202	724 aa		7.68	□□□□□ -1.18
AFG3	YER017C	SEC8	P32855	1065 aa		7.68	□□□□□ -1.18
AFG3	YER017C	VPS29	P38759	282 aa		7.68	□□□□□ -1.18
AFG3	YER017C	YEL025C	P39991	1188 aa		7.68	□□□□□ -1.18
AFG3	YER017C	NPP2	P39997	493 aa		7.68	□□□□□ -1.18
AFG3	YER017C	YTA12	P40341	825 aa		7.68	□□□□□ -1.18
AFG3	YER017C	NMD5	P46970	1048 aa		7.68	□□□□□ -1.18
AFG3	YER017C	ORC5	P50874	479 aa		7.68	□□□□□ -1.18
AFG3	YER017C	HOT1	Q03213	719 aa		7.68	□□□□□ -1.18
AFG3	YER017C	TDA9	Q04545	1251 aa		7.68	□□□□□ -1.18
AFG3	YER017C	COQ9	Q05779	260 aa		7.68	□□□□□ -1.18
AFG3	YER017C	CFT2	Q12102	859 aa	Predicted RBP	7.68	□□□□□ -1.18
AFG3	YER017C	EUG1	P32474	517 aa		7.67	□□□□□ -1.18
AFG3	YER017C	SWI3	P32591	825 aa		7.67	□□□□□ -1.18
AFG3	YER017C	SAK1	P38990	1142 aa		7.67	□□□□□ -1.18
AFG3	YER017C	CCT2	P39076	527 aa	Known RBP	7.67	□□□□□ -1.18
AFG3	YER017C	NET1	P47035	1189 aa		7.67	□□□□□ -1.18
AFG3	YER017C	YGR111W	P53265	400 aa		7.67	□□□□□ -1.18
AFG3	YER017C	TPO2	P53283	614 aa		7.67	□□□□□ -1.18
AFG3	YER017C	YNL146W	P53906	100 aa		7.67	□□□□□ -1.18
AFG3	YER017C	YAF9	P53930	226 aa		7.67	□□□□□ -1.18
AFG3	YER017C	YMR187C	Q03236	431 aa		7.67	□□□□□ -1.18
AFG3	YER017C	IWR1	Q07532	353 aa	Predicted RBP	7.67	□□□□□ -1.18
AFG3	YER017C	DBF4	P32325	704 aa		7.67	□□□□□ -1.18
AFG3	YER017C	GCD6	P32501	712 aa	Known RBP	7.67	□□□□□ -1.18
AFG3	YER017C	ECM2	P38241	364 aa	Known RBP	7.67	□□□□□ -1.18
AFG3	YER017C	TIF5	P38431	405 aa	Known RBP	7.67	□□□□□ -1.18
AFG3	YER017C	RRT6	P53117	311 aa	Predicted RBP	7.67	□□□□□ -1.18
AFG3	YER017C	UTP6	Q02354	440 aa	Known RBP	7.67	□□□□□ -1.18
AFG3	YER017C	PKC1	P24583	1151 aa		7.66	□□□□□ -1.18
AFG3	YER017C	IRE1	P32361	1115 aa		7.66	□□□□□ -1.18
AFG3	YER017C	IXR1	P33417	597 aa		7.66	□□□□□ -1.18
AFG3	YER017C	CSG2	P35206	410 aa		7.66	□□□□□ -1.18
AFG3	YER017C	DBP7	P36120	742 aa	Known RBP	7.66	□□□□□ -1.18
AFG3	YER017C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7.66	□□□□□ -1.18	not detected
AFG3	YER017C	RPS7B	P48164	190 aa	Known RBP	7.66	□□□□□ -1.18
AFG3	YER017C	ASN1	P49089	572 aa	Known RBP	7.66	□□□□□ -1.18
AFG3	YER017C	RPA49	Q01080	415 aa	Predicted RBP	7.66	□□□□□ -1.18
AFG3	YER017C	YMR321C	Q04898	105 aa		7.66	□□□□□ -1.18
AFG3	YER017C	YDR222W	Q04925	415 aa		7.66	□□□□□ -1.18
AFG3	YER017C	TFC4	P33339	1025 aa		7.66	□□□□□ -1.18
AFG3	YER017C	YJR039W	P47107	1121 aa		7.66	□□□□□ -1.18
AFG3	YER017C	DRN1	P53255	507 aa	Known RBP	7.66	□□□□□ -1.18
AFG3	YER017C	PPM1	Q04081	328 aa		7.66	□□□□□ -1.18
AFG3	YER017C	PNP1	Q05788	311 aa		7.66	□□□□□ -1.18
AFG3	YER017C	YLL058W	Q12198	575 aa		7.66	□□□□□ -1.18
AFG3	YER017C	VMA4	P22203	233 aa	Known RBP	7.65	□□□□□ -1.18
AFG3	YER017C	GYP6	P32806	458 aa		7.65	□□□□□ -1.18
AFG3	YER017C	YBL055C	P34220	418 aa	Predicted RBP	7.65	□□□□□ -1.18
AFG3	YER017C	END3	P39013	349 aa		7.65	□□□□□ -1.18
AFG3	YER017C	SBE2	P42223	864 aa	Known RBP	7.65	□□□□□ -1.18
AFG3	YER017C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	7.65	□□□□□ -1.18	RIP-Chip
AFG3	YER017C	CUL3	P53202	744 aa		7.65	□□□□□ -1.18
AFG3	YER017C	ATG16	Q03818	150 aa		7.65	□□□□□ -1.18
AFG3	YER017C	SDH5	Q08230	162 aa		7.65	□□□□□ -1.18
AFG3	YER017C	YPL225W	Q08971	146 aa	Known RBP	7.65	□□□□□ -1.18
AFG3	YER017C	ACM1	Q08981	209 aa		7.65	□□□□□ -1.18
AFG3	YER017C	SSA1	P10591	642 aa	Known RBP	7.64	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms