RNA–Protein interactions for RNA: YEL004W

YEA4, Transcript of Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter, yeast

Gene YEA4, Length 1,029 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YEA4	YEL004W	TAD1	P53065	400 aa		5.56	□□□□□ -1.52
YEA4	YEL004W	NOG2	P53742	486 aa	Known RBP	5.56	□□□□□ -1.52
YEA4	YEL004W	CUE2	P36075	443 aa	Known RBP	5.55	□□□□□ -1.52
YEA4	YEL004W	PFA3	P42836	336 aa		5.55	□□□□□ -1.52
YEA4	YEL004W	SSY5	P47002	699 aa		5.55	□□□□□ -1.52
YEA4	YEL004W	CRR1	Q05790	422 aa		5.55	□□□□□ -1.52
YEA4	YEL004W	SCT1	P32784	759 aa		5.54	□□□□□ -1.52
YEA4	YEL004W	EMC3	P36039	253 aa		5.54	□□□□□ -1.52
YEA4	YEL004W	PZF1	P39933	429 aa		5.54	□□□□□ -1.52
YEA4	YEL004W	UBP6	P43593	499 aa	Known RBP	5.54	□□□□□ -1.52
YEA4	YEL004W	ASM4	Q05166	528 aa		5.54	□□□□□ -1.52
YEA4	YEL004W	IRC13	Q08630	104 aa		5.54	□□□□□ -1.52
YEA4	YEL004W	YLR415C	O13578	112 aa		5.53	□□□□□ -1.52
YEA4	YEL004W	PRC1	P00729	532 aa		5.53	□□□□□ -1.52
YEA4	YEL004W	PCL5	P38794	229 aa		5.53	□□□□□ -1.52
YEA4	YEL004W	NIT3	P49954	291 aa		5.53	□□□□□ -1.52
YEA4	YEL004W	NOP7	P53261	605 aa	Known RBP	5.53	□□□□□ -1.52
YEA4	YEL004W	NRG1	Q03125	231 aa		5.53	□□□□□ -1.52
YEA4	YEL004W	BDF2	Q07442	638 aa		5.53	□□□□□ -1.52
YEA4	YEL004W	GPR1	Q12361	961 aa		5.53	□□□□□ -1.52
YEA4	YEL004W	PEX2	P32800	271 aa		5.52	□□□□□ -1.53
YEA4	YEL004W	TDP1	P38319	544 aa		5.52	□□□□□ -1.53
YEA4	YEL004W	YGR283C	P53336	341 aa	Predicted RBP	5.52	□□□□□ -1.53
YEA4	YEL004W	TGL5	Q12043	749 aa		5.52	□□□□□ -1.53
YEA4	YEL004W	OSH2	Q12451	1283 aa		5.52	□□□□□ -1.53
YEA4	YEL004W	CIT1	P00890	479 aa		5.51	□□□□□ -1.53
YEA4	YEL004W	HSP60	P19882	572 aa	Known RBP	5.51	□□□□□ -1.53
YEA4	YEL004W	BET3	P36149	193 aa		5.51	□□□□□ -1.53
YEA4	YEL004W	AMA1	P50082	593 aa		5.51	□□□□□ -1.53
YEA4	YEL004W	TAF8	Q03750	510 aa		5.51	□□□□□ -1.53
YEA4	YEL004W	YIR042C	P40586	236 aa		5.5	□□□□□ -1.53
YEA4	YEL004W	TIM54	P47045	478 aa		5.5	□□□□□ -1.53
YEA4	YEL004W	YGR125W	P53273	1036 aa		5.5	□□□□□ -1.53
YEA4	YEL004W	THI21	Q08975	551 aa		5.5	□□□□□ -1.53
YEA4	YEL004W	BNR1	P40450	1375 aa		5.5	□□□□□ -1.53
YEA4	YEL004W	SAP190	P36123	1033 aa		5.49	□□□□□ -1.53
YEA4	YEL004W	YHR020W	P38708	688 aa	Known RBP	5.49	□□□□□ -1.53
YEA4	YEL004W	HOS4	P40480	1083 aa		5.49	□□□□□ -1.53
YEA4	YEL004W	RSC3	Q06639	885 aa		5.49	□□□□□ -1.53
YEA4	YEL004W	TOM70	P07213	617 aa	Known RBP	5.48	□□□□□ -1.53
YEA4	YEL004W	NGG1	P32494	702 aa		5.48	□□□□□ -1.53
YEA4	YEL004W	RIA1	P53893	1110 aa		5.48	□□□□□ -1.53
YEA4	YEL004W	YDL124W	Q07551	312 aa	Known RBP	5.48	□□□□□ -1.53
YEA4	YEL004W	LAT1	P12695	482 aa	Known RBP	5.47	□□□□□ -1.53
YEA4	YEL004W	HIS7	P33734	552 aa	Known RBP	5.47	□□□□□ -1.53
YEA4	YEL004W	SIC1	P38634	284 aa		5.47	□□□□□ -1.53
YEA4	YEL004W	BCD1	P38772	366 aa		5.47	□□□□□ -1.53
YEA4	YEL004W	TAH11	P47112	604 aa		5.47	□□□□□ -1.53
YEA4	YEL004W	RTA1	P53047	317 aa		5.47	□□□□□ -1.53
YEA4	YEL004W	VPS73	P53142	486 aa	Known RBP	5.47	□□□□□ -1.53
YEA4	YEL004W	HXT16	P47185	567 aa		5.46	□□□□□ -1.54
YEA4	YEL004W	DAM1	P53267	343 aa		5.46	□□□□□ -1.54
YEA4	YEL004W	YBR182C-A	Q8TGU6	64 aa		5.46	□□□□□ -1.54
YEA4	YEL004W	PPZ2	P33329	710 aa		5.45	□□□□□ -1.54
YEA4	YEL004W	SET5	P38890	526 aa	Known RBP	5.45	□□□□□ -1.54
YEA4	YEL004W	ALG2	P43636	503 aa		5.45	□□□□□ -1.54
YEA4	YEL004W	TY4A-J	P47023	414 aa		5.45	□□□□□ -1.54
YEA4	YEL004W	FLC1	Q08967	793 aa		5.45	□□□□□ -1.54
YEA4	YEL004W	NDJ1	Q12366	352 aa		5.45	□□□□□ -1.54
YEA4	YEL004W	GFA1	P14742	717 aa	Known RBP	5.44	□□□□□ -1.54
YEA4	YEL004W	FLO10	P36170	1169 aa		5.44	□□□□□ -1.54
YEA4	YEL004W	RIX1	P38883	763 aa	Predicted RBP	5.44	□□□□□ -1.54
YEA4	YEL004W	FMP52	P40008	231 aa		5.44	□□□□□ -1.54
YEA4	YEL004W	HUL4	P40985	892 aa		5.44	□□□□□ -1.54
YEA4	YEL004W	SGO1	Q08490	590 aa		5.44	□□□□□ -1.54
YEA4	YEL004W	MET7	Q08645	548 aa		5.44	□□□□□ -1.54
YEA4	YEL004W	MET6	P05694	767 aa	Known RBP	5.43	□□□□□ -1.54
YEA4	YEL004W	KIN3	P22209	435 aa		5.43	□□□□□ -1.54
YEA4	YEL004W	CBR1	P38626	284 aa	Known RBP	5.43	□□□□□ -1.54
YEA4	YEL004W	YJL049W	P47048	450 aa		5.43	□□□□□ -1.54
YEA4	YEL004W	HSV2	P50079	448 aa	Predicted RBP	5.43	□□□□□ -1.54
YEA4	YEL004W	UBC11	P52492	156 aa		5.43	□□□□□ -1.54
YEA4	YEL004W	ZIP2	P53061	704 aa		5.43	□□□□□ -1.54
YEA4	YEL004W	TEX1	P53851	422 aa	Known RBP	5.43	□□□□□ -1.54
YEA4	YEL004W	YDR514C	Q04408	483 aa		5.43	□□□□□ -1.54
YEA4	YEL004W	REH1	Q06709	432 aa		5.43	□□□□□ -1.54
YEA4	YEL004W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
YEA4	YEL004W	PER1	P25625	357 aa		5.42	□□□□□ -1.54
YEA4	YEL004W	HIR1	P32479	840 aa		5.42	□□□□□ -1.54
YEA4	YEL004W	MTR3	P48240	250 aa	Predicted RBP	5.42	□□□□□ -1.54
YEA4	YEL004W	TEL2	P53038	688 aa		5.42	□□□□□ -1.54
YEA4	YEL004W	HUL5	P53119	910 aa		5.42	□□□□□ -1.54
YEA4	YEL004W	ATP25	Q03153	612 aa		5.42	□□□□□ -1.54
YEA4	YEL004W	CAN1	P04817	590 aa		5.41	□□□□□ -1.54
YEA4	YEL004W	CDC43	P18898	376 aa		5.41	□□□□□ -1.54
YEA4	YEL004W	RSP5	P39940	809 aa	Known RBP	5.41	□□□□□ -1.54
YEA4	YEL004W	RLP7	P40693	322 aa	Known RBP	5.41	□□□□□ -1.54
YEA4	YEL004W	BAP3	P41815	604 aa		5.41	□□□□□ -1.54
YEA4	YEL004W	SHR5	P41912	237 aa		5.41	□□□□□ -1.54
YEA4	YEL004W	HCA4	P20448	770 aa	Known RBP	5.4	□□□□□ -1.54
YEA4	YEL004W	SPC29	P33419	253 aa		5.4	□□□□□ -1.54
YEA4	YEL004W	SSL2	Q00578	843 aa		5.4	□□□□□ -1.54
YEA4	YEL004W	YDR338C	Q05497	695 aa		5.4	□□□□□ -1.54
YEA4	YEL004W	DIF1	O13577	133 aa		5.39	□□□□□ -1.55
YEA4	YEL004W	TUB1	P09733	447 aa	Known RBP	5.39	□□□□□ -1.55
YEA4	YEL004W	YBR259W	P38338	688 aa		5.39	□□□□□ -1.55
YEA4	YEL004W	CCT7	P42943	550 aa	Known RBP	5.39	□□□□□ -1.55
YEA4	YEL004W	IMO32	P53219	342 aa		5.39	□□□□□ -1.55
YEA4	YEL004W	SMX3	P54999	86 aa	Predicted RBP	5.39	□□□□□ -1.55
YEA4	YEL004W	ATG11	Q12527	1178 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms