RNA–Protein interactions for RNA: YDR218C

SPR28, Transcript of Sporulation-specific homolog of the CDC3/10/11/12 family of genes, yeastyeast

Gene SPR28, Length 1,272 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPR28YDR218C TRP2P00899 507 aaKnown RBP5.29□□□□□ -1.56
SPR28YDR218C PHO81P17442 1178 aa5.29□□□□□ -1.56
SPR28YDR218C AEP2P22136 580 aa5.29□□□□□ -1.56
SPR28YDR218C LYP1P32487 611 aa5.29□□□□□ -1.56
SPR28YDR218C SAS3P34218 831 aa5.29□□□□□ -1.56
SPR28YDR218C YKL050CP35736 922 aa5.29□□□□□ -1.56
SPR28YDR218C BET3P36149 193 aa5.29□□□□□ -1.56
SPR28YDR218C RFC5P38251 354 aa5.29□□□□□ -1.56
SPR28YDR218C MPT5P39016 859 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
SPR28YDR218C PBP1P53297 722 aaKnown RBP5.29□□□□□ -1.56
SPR28YDR218C ERO1Q03103 563 aa5.29□□□□□ -1.56
SPR28YDR218C SPT7P35177 1332 aa5.28□□□□□ -1.56
SPR28YDR218C CDC20P26309 610 aa5.28□□□□□ -1.56
SPR28YDR218C DOM34P33309 386 aa5.28□□□□□ -1.56
SPR28YDR218C CCC2P38995 1004 aa5.28□□□□□ -1.56
SPR28YDR218C FAF1P40546 346 aaPredicted RBP5.28□□□□□ -1.56
SPR28YDR218C SNP1Q00916 300 aaPredicted RBP5.28□□□□□ -1.56
SPR28YDR218C OPY2Q06810 360 aa5.28□□□□□ -1.56
SPR28YDR218C SVS1Q12254 260 aa5.28□□□□□ -1.56
SPR28YDR218C MSM1P22438 575 aa5.27□□□□□ -1.57
SPR28YDR218C LST4P34239 828 aa5.27□□□□□ -1.57
SPR28YDR218C RSM24Q03976 319 aa5.27□□□□□ -1.57
SPR28YDR218C GSF2Q04697 403 aaKnown RBP5.27□□□□□ -1.57
SPR28YDR218C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
SPR28YDR218C MDM12Q92328 271 aa5.27□□□□□ -1.57
SPR28YDR218C YOL087CQ99247 1116 aa5.27□□□□□ -1.57
SPR28YDR218C TUB2P02557 457 aaKnown RBP5.26□□□□□ -1.57
SPR28YDR218C VBA3P25594 458 aa5.26□□□□□ -1.57
SPR28YDR218C DBF20P32328 564 aa5.26□□□□□ -1.57
SPR28YDR218C MCM10P32354 571 aa5.26□□□□□ -1.57
SPR28YDR218C PIN4P34217 668 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
SPR28YDR218C DUG1P43616 481 aaKnown RBP5.26□□□□□ -1.57
SPR28YDR218C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
SPR28YDR218C MTQ2Q03920 221 aaPredicted RBP5.26□□□□□ -1.57
SPR28YDR218C TIF35Q04067 274 aaKnown RBP5.26□□□□□ -1.57
SPR28YDR218C SIZ1Q04195 904 aa5.26□□□□□ -1.57
SPR28YDR218C YLR225CQ05948 407 aaKnown RBP5.26□□□□□ -1.57
SPR28YDR218C IMH1Q06704 911 aaKnown RBP5.26□□□□□ -1.57
SPR28YDR218C SSP2Q08646 371 aa5.26□□□□□ -1.57
SPR28YDR218C VPS5Q92331 675 aa5.26□□□□□ -1.57
SPR28YDR218C DBP2P24783 546 aaKnown RBP5.25□□□□□ -1.57
SPR28YDR218C MEF1P25039 761 aa5.25□□□□□ -1.57
SPR28YDR218C KCC4P25389 1037 aa5.25□□□□□ -1.57
SPR28YDR218C BRF1P29056 596 aa5.25□□□□□ -1.57
SPR28YDR218C PRP19P32523 503 aaKnown RBP5.25□□□□□ -1.57
SPR28YDR218C VPH1P32563 840 aaKnown RBP5.25□□□□□ -1.57
SPR28YDR218C ANP1P32629 500 aa5.25□□□□□ -1.57
SPR28YDR218C MOT2P34909 587 aaKnown RBP5.25□□□□□ -1.57
SPR28YDR218C RER2P35196 286 aa5.25□□□□□ -1.57
SPR28YDR218C APE4P38821 490 aa5.25□□□□□ -1.57
SPR28YDR218C MXR1P40029 184 aa5.25□□□□□ -1.57
SPR28YDR218C MGS1P40151 587 aa5.25□□□□□ -1.57
SPR28YDR218C RSC1P53236 928 aa5.25□□□□□ -1.57
SPR28YDR218C TMA10Q06177 86 aa5.25□□□□□ -1.57
SPR28YDR218C ACK1Q07622 623 aaPredicted RBP5.25□□□□□ -1.57
SPR28YDR218C YLR001CQ07895 862 aa5.25□□□□□ -1.57
SPR28YDR218C GPB1Q08886 897 aa5.25□□□□□ -1.57
SPR28YDR218C MED1Q12321 566 aa5.25□□□□□ -1.57
SPR28YDR218C CYB2P00175 591 aa5.24□□□□□ -1.57
SPR28YDR218C HSP82P02829 709 aaKnown RBP5.24□□□□□ -1.57
SPR28YDR218C INO1P11986 533 aa5.24□□□□□ -1.57
SPR28YDR218C RAD53P22216 821 aa5.24□□□□□ -1.57
SPR28YDR218C IMP2'P32351 346 aa5.24□□□□□ -1.57
SPR28YDR218C YKL107WP34251 309 aa5.24□□□□□ -1.57
SPR28YDR218C YHL041WP38730 149 aa5.24□□□□□ -1.57
SPR28YDR218C SAH1P39954 449 aaKnown RBP5.24□□□□□ -1.57
SPR28YDR218C ESL1P40456 1118 aa5.24□□□□□ -1.57
SPR28YDR218C HIS6P40545 261 aa5.24□□□□□ -1.57
SPR28YDR218C RSC8P43609 557 aaKnown RBP5.24□□□□□ -1.57
SPR28YDR218C MAL11P53048 616 aa5.24□□□□□ -1.57
SPR28YDR218C VPS62P53285 467 aa5.24□□□□□ -1.57
SPR28YDR218C SRP1Q02821 542 aaKnown RBP5.24□□□□□ -1.57
SPR28YDR218C VPS30Q02948 557 aa5.24□□□□□ -1.57
SPR28YDR218C YAP6Q03935 383 aa5.24□□□□□ -1.57
SPR28YDR218C PHM6Q05637 104 aa5.24□□□□□ -1.57
SPR28YDR218C YTM1Q12024 460 aaPredicted RBP5.24□□□□□ -1.57
SPR28YDR218C RMP1Q12530 201 aa5.24□□□□□ -1.57
SPR28YDR218C HOM3P10869 527 aa5.23□□□□□ -1.57
SPR28YDR218C PFK1P16861 987 aaKnown RBP5.23□□□□□ -1.57
SPR28YDR218C RER1P25560 188 aa5.23□□□□□ -1.57
SPR28YDR218C APL1P27351 700 aa5.23□□□□□ -1.57
SPR28YDR218C YEL1P34225 687 aa5.23□□□□□ -1.57
SPR28YDR218C NUP120P35729 1037 aa5.23□□□□□ -1.57
SPR28YDR218C GCV2P49095 1034 aa5.23□□□□□ -1.57
SPR28YDR218C GTF1P53260 183 aaPredicted RBP5.23□□□□□ -1.57
SPR28YDR218C RXT3Q07458 294 aa5.23□□□□□ -1.57
SPR28YDR218C RKM4Q12504 494 aa5.23□□□□□ -1.57
SPR28YDR218C SSM4P40318 1319 aa5.23□□□□□ -1.57
SPR28YDR218C BI4P03879 638 aa5.22□□□□□ -1.57
SPR28YDR218C RPL11AP0C0W9 174 aaKnown RBP5.22□□□□□ -1.57
SPR28YDR218C URA1P28272 314 aaPredicted RBP5.22□□□□□ -1.57
SPR28YDR218C MCM7P38132 845 aa5.22□□□□□ -1.57
SPR28YDR218C ACA1P39970 489 aa5.22□□□□□ -1.57
SPR28YDR218C EMP65P40085 556 aa5.22□□□□□ -1.57
SPR28YDR218C ATP22P50273 684 aaPredicted RBP5.22□□□□□ -1.57
SPR28YDR218C SLI1P53304 468 aa5.22□□□□□ -1.57
SPR28YDR218C HMI1Q12039 706 aa5.22□□□□□ -1.57
SPR28YDR218C CLF1Q12309 687 aaPredicted RBP5.22□□□□□ -1.57
SPR28YDR218C RPL11BQ3E757 174 aaPredicted RBP5.22□□□□□ -1.57
SPR28YDR218C HBN1Q96VH4 193 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms