RNA–Protein interactions for RNA: YDR207C

UME6, Transcript of Rpd3L histone deacetylase complex subunit, yeast

Gene UME6, Length 2,511 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UME6	YDR207C	CCT2	P39076	527 aa	Known RBP	11.3	□□□□□ -0.6
UME6	YDR207C	YOR352W	Q08816	343 aa		11.3	□□□□□ -0.6
UME6	YDR207C	POM152	P39685	1337 aa		11.3	□□□□□ -0.6
UME6	YDR207C	MSB1	P21339	1137 aa	Known RBP	11.3	□□□□□ -0.6
UME6	YDR207C	NIP1	P32497	812 aa	Known RBP	11.3	□□□□□ -0.6
UME6	YDR207C	HXT6	P39003	570 aa	Known RBP	11.3	□□□□□ -0.6
UME6	YDR207C	HXT7	P39004	570 aa		11.3	□□□□□ -0.6
UME6	YDR207C	KAP114	P53067	1004 aa		11.3	□□□□□ -0.6
UME6	YDR207C	CWC25	P53854	179 aa	Known RBP	11.3	□□□□□ -0.6
UME6	YDR207C	UTP10	P42945	1769 aa	Known RBP	11.29	□□□□□ -0.6
UME6	YDR207C	CMD1	P06787	147 aa	Known RBP	11.29	□□□□□ -0.6
UME6	YDR207C	YKL063C	P35725	167 aa		11.29	□□□□□ -0.6
UME6	YDR207C	ULP2	P40537	1034 aa	Predicted RBP	11.29	□□□□□ -0.6
UME6	YDR207C	YJR008W	P47085	338 aa		11.29	□□□□□ -0.6
UME6	YDR207C	YJR054W	P47114	497 aa		11.29	□□□□□ -0.6
UME6	YDR207C	MDR1	P53258	950 aa		11.29	□□□□□ -0.6
UME6	YDR207C	SMC5	Q08204	1093 aa		11.29	□□□□□ -0.6
UME6	YDR207C	MED4	Q12343	284 aa		11.29	□□□□□ -0.6
UME6	YDR207C	TPM1	P17536	199 aa	Known RBP	11.29	□□□□□ -0.6
UME6	YDR207C	MLS1	P30952	554 aa		11.29	□□□□□ -0.6
UME6	YDR207C	MIA40	P36046	403 aa		11.29	□□□□□ -0.6
UME6	YDR207C	PTA1	Q01329	785 aa	Predicted RBP	11.29	□□□□□ -0.6
UME6	YDR207C	ISW2	Q08773	1120 aa		11.29	□□□□□ -0.6
UME6	YDR207C	DCS2	Q12123	353 aa		11.29	□□□□□ -0.6
UME6	YDR207C	GYP5	Q12344	894 aa		11.29	□□□□□ -0.6
UME6	YDR207C	DSF1	P0CX08	502 aa		11.28	□□□□□ -0.6
UME6	YDR207C	YNR073C	P0CX09	502 aa		11.28	□□□□□ -0.6
UME6	YDR207C	SLA1	P32790	1244 aa		11.28	□□□□□ -0.6
UME6	YDR207C	AAP1	P37898	856 aa	Known RBP	11.28	□□□□□ -0.6
UME6	YDR207C	ATP3	P38077	311 aa	Known RBP	11.28	□□□□□ -0.6
UME6	YDR207C	GIP1	P38229	639 aa		11.28	□□□□□ -0.6
UME6	YDR207C	YAP3	P38749	330 aa		11.28	□□□□□ -0.6
UME6	YDR207C	DLD3	P39976	496 aa	Known RBP	11.28	□□□□□ -0.6
UME6	YDR207C	RIC1	P40395	1056 aa		11.28	□□□□□ -0.6
UME6	YDR207C	PSP2	P50109	593 aa	Known RBP	11.28	□□□□□ -0.6
UME6	YDR207C	SPC105	P53148	917 aa		11.28	□□□□□ -0.6
UME6	YDR207C	COS6	P53344	381 aa		11.28	□□□□□ -0.6
UME6	YDR207C	MEC3	Q02574	474 aa		11.28	□□□□□ -0.6
UME6	YDR207C	TIP41	Q12199	356 aa		11.28	□□□□□ -0.6
UME6	YDR207C	SPO14	P36126	1683 aa		11.28	□□□□□ -0.6
UME6	YDR207C	YKT6	P36015	200 aa	Known RBP	11.28	□□□□□ -0.6
UME6	YDR207C	VPS51	P36116	164 aa		11.28	□□□□□ -0.6
UME6	YDR207C	KIC1	P38692	1080 aa		11.28	□□□□□ -0.6
UME6	YDR207C	SNZ3	P43545	298 aa		11.28	□□□□□ -0.6
UME6	YDR207C	PAN2	P53010	1115 aa	Predicted RBP	11.28	□□□□□ -0.6
UME6	YDR207C	SNZ2	P53824	298 aa		11.28	□□□□□ -0.6
UME6	YDR207C	NGL3	Q03210	505 aa		11.28	□□□□□ -0.6
UME6	YDR207C	TMA64	Q04600	565 aa	Known RBP	11.28	□□□□□ -0.6
UME6	YDR207C	COQ4	O13525	335 aa		11.27	□□□□□ -0.61
UME6	YDR207C	PYC1	P11154	1178 aa	Known RBP	11.27	□□□□□ -0.61
UME6	YDR207C	SSB1	P11484	613 aa	Known RBP	11.27	□□□□□ -0.61
UME6	YDR207C	YER034W	P40022	185 aa	Known RBP	11.27	□□□□□ -0.61
UME6	YDR207C	SSB2	P40150	613 aa	Known RBP	11.27	□□□□□ -0.61
UME6	YDR207C	YGR054W	P53235	642 aa	Known RBP	11.27	□□□□□ -0.61
UME6	YDR207C	SPS1	P08458	490 aa		11.27	□□□□□ -0.61
UME6	YDR207C	LCB1	P25045	558 aa	Known RBP	11.27	□□□□□ -0.61
UME6	YDR207C	MNN11	P46985	422 aa	Known RBP	11.27	□□□□□ -0.61
UME6	YDR207C	ALT1	P52893	592 aa		11.27	□□□□□ -0.61
UME6	YDR207C	YLR001C	Q07895	862 aa		11.27	□□□□□ -0.61
UME6	YDR207C	TUS1	Q06412	1307 aa		11.26	□□□□□ -0.61
UME6	YDR207C	GPA2	P10823	449 aa		11.26	□□□□□ -0.61
UME6	YDR207C	SMY1	P32364	656 aa	Known RBP	11.26	□□□□□ -0.61
UME6	YDR207C	UIP5	P36137	443 aa		11.26	□□□□□ -0.61
UME6	YDR207C	LSM12	P38828	187 aa	Known RBP	11.26	□□□□□ -0.61
UME6	YDR207C	FYV6	P53913	173 aa		11.26	□□□□□ -0.61
UME6	YDR207C	GET4	Q12125	312 aa		11.26	□□□□□ -0.61
UME6	YDR207C	BUG1	Q12191	341 aa		11.26	□□□□□ -0.61
UME6	YDR207C	MTF2	P10849	440 aa		11.26	□□□□□ -0.61
UME6	YDR207C	SEC63	P14906	663 aa		11.26	□□□□□ -0.61
UME6	YDR207C	PEX1	P24004	1043 aa		11.26	□□□□□ -0.61
UME6	YDR207C	YCR051W	P25631	222 aa		11.26	□□□□□ -0.61
UME6	YDR207C	SUV3	P32580	737 aa		11.26	□□□□□ -0.61
UME6	YDR207C	SAS3	P34218	831 aa		11.26	□□□□□ -0.61
UME6	YDR207C	TDA10	P42938	290 aa		11.26	□□□□□ -0.61
UME6	YDR207C	MDE1	P47095	244 aa		11.26	□□□□□ -0.61
UME6	YDR207C	FDC1	Q03034	503 aa		11.26	□□□□□ -0.61
UME6	YDR207C	SVF1	Q05515	481 aa		11.26	□□□□□ -0.61
UME6	YDR207C	RIM20	Q12033	661 aa		11.26	□□□□□ -0.61
UME6	YDR207C	DNF3	Q12674	1656 aa		11.25	□□□□□ -0.61
UME6	YDR207C	MSS116	P15424	664 aa	Known RBP	11.25	□□□□□ -0.61
UME6	YDR207C	MCM4	P30665	933 aa	Known RBP	11.25	□□□□□ -0.61
UME6	YDR207C	SDH8	P38345	138 aa		11.25	□□□□□ -0.61
UME6	YDR207C	ERG5	P54781	538 aa		11.25	□□□□□ -0.61
UME6	YDR207C	EMI2	Q04409	500 aa	Known RBP	11.25	□□□□□ -0.61
UME6	YDR207C	BNI1	P41832	1953 aa		11.25	□□□□□ -0.61
UME6	YDR207C	PAT1	P25644	796 aa	Known RBP	11.25	□□□□□ -0.61
UME6	YDR207C	VMA8	P32610	256 aa	Known RBP	11.25	□□□□□ -0.61
UME6	YDR207C	SHM1	P37292	490 aa	Predicted RBP	11.25	□□□□□ -0.61
UME6	YDR207C	OAF1	P39720	1047 aa	Predicted RBP	11.25	□□□□□ -0.61
UME6	YDR207C	ARV1	Q06541	321 aa		11.25	□□□□□ -0.61
UME6	YDR207C	YOR289W	Q12012	251 aa	Predicted RBP	11.25	□□□□□ -0.61
UME6	YDR207C	RUP1	Q12242	671 aa		11.25	□□□□□ -0.61
UME6	YDR207C	BUD3	P25558	1636 aa		11.24	□□□□□ -0.61
UME6	YDR207C	SUP45	P12385	437 aa	Known RBP	11.24	□□□□□ -0.61
UME6	YDR207C	URA1	P28272	314 aa	Predicted RBP	11.24	□□□□□ -0.61
UME6	YDR207C	PXA2	P34230	853 aa		11.24	□□□□□ -0.61
UME6	YDR207C	SSF1	P38789	453 aa	Predicted RBP	11.24	□□□□□ -0.61
UME6	YDR207C	RPH1	P39956	796 aa		11.24	□□□□□ -0.61
UME6	YDR207C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	11.24	□□□□□ -0.61	not detected
UME6	YDR207C	GLO2	Q05584	274 aa		11.24	□□□□□ -0.61

Retrieved 100 of 5,963 RNA–protein pairs in 35.8 ms