RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W RPN7Q06103 429 aaKnown RBP5.47□□□□□ -1.53
UBC1YDR177W SYT1Q06836 1226 aa5.47□□□□□ -1.53
UBC1YDR177W RSB1Q08417 382 aa5.47□□□□□ -1.53
UBC1YDR177W HFI1Q12060 488 aa5.47□□□□□ -1.53
UBC1YDR177W TY4A-HQ6Q5P6 413 aa5.47□□□□□ -1.53
UBC1YDR177W BI4P03879 638 aa5.46□□□□□ -1.54
UBC1YDR177W PDC5P16467 563 aaKnown RBP5.46□□□□□ -1.54
UBC1YDR177W NAR1P23503 491 aaKnown RBP5.46□□□□□ -1.54
UBC1YDR177W NGG1P32494 702 aa5.46□□□□□ -1.54
UBC1YDR177W OAF3P36023 863 aa5.46□□□□□ -1.54
UBC1YDR177W GIC1P38785 314 aa5.46□□□□□ -1.54
UBC1YDR177W FAF1P40546 346 aaPredicted RBP5.46□□□□□ -1.54
UBC1YDR177W UBC9P50623 157 aaPredicted RBP5.46□□□□□ -1.54
UBC1YDR177W PUS2P53167 370 aa5.46□□□□□ -1.54
UBC1YDR177W GPD1Q00055 391 aaKnown RBP5.46□□□□□ -1.54
UBC1YDR177W YOL114CQ12322 202 aa5.46□□□□□ -1.54
UBC1YDR177W NHA1Q99271 985 aa5.46□□□□□ -1.54
UBC1YDR177W PRC1P00729 532 aa5.45□□□□□ -1.54
UBC1YDR177W MSS18P08593 268 aa5.45□□□□□ -1.54
UBC1YDR177W SEC65P29478 273 aa5.45□□□□□ -1.54
UBC1YDR177W CYS3P31373 394 aaKnown RBP5.45□□□□□ -1.54
UBC1YDR177W MCM10P32354 571 aa5.45□□□□□ -1.54
UBC1YDR177W TFC3P34111 1160 aa5.45□□□□□ -1.54
UBC1YDR177W TAF5P38129 798 aa5.45□□□□□ -1.54
UBC1YDR177W PSY4P38193 441 aa5.45□□□□□ -1.54
UBC1YDR177W KAP123P40069 1113 aaKnown RBP5.45□□□□□ -1.54
UBC1YDR177W ASK10P48361 1146 aa5.45□□□□□ -1.54
UBC1YDR177W CRR1Q05790 422 aa5.45□□□□□ -1.54
UBC1YDR177W PUS7Q08647 676 aaKnown RBP5.45□□□□□ -1.54
UBC1YDR177W APA1P16550 321 aaKnown RBP5.44□□□□□ -1.54
UBC1YDR177W HOP1P20050 605 aa5.44□□□□□ -1.54
UBC1YDR177W IMP2'P32351 346 aa5.44□□□□□ -1.54
UBC1YDR177W RPT3P33298 428 aaKnown RBP5.44□□□□□ -1.54
UBC1YDR177W SEG2P34250 1132 aa5.44□□□□□ -1.54
UBC1YDR177W HXT6P39003 570 aaKnown RBP5.44□□□□□ -1.54
UBC1YDR177W HXT7P39004 570 aa5.44□□□□□ -1.54
UBC1YDR177W ENP2P48234 707 aaKnown RBP5.44□□□□□ -1.54
UBC1YDR177W TEP1P53916 434 aa5.44□□□□□ -1.54
UBC1YDR177W GTR1Q00582 310 aa5.44□□□□□ -1.54
UBC1YDR177W YBR182C-AQ8TGU6 64 aa5.44□□□□□ -1.54
UBC1YDR177W CDC31P06704 161 aaKnown RBP5.43□□□□□ -1.54
UBC1YDR177W SNF5P18480 905 aa5.43□□□□□ -1.54
UBC1YDR177W PHO3P24031 467 aa5.43□□□□□ -1.54
UBC1YDR177W SRO9P25567 434 aaKnown RBP5.43□□□□□ -1.54
UBC1YDR177W TYE7P33122 291 aaPredicted RBP5.43□□□□□ -1.54
UBC1YDR177W YKR018CP36114 725 aa5.43□□□□□ -1.54
UBC1YDR177W GPT2P36148 743 aa5.43□□□□□ -1.54
UBC1YDR177W NMD3P38861 518 aaKnown RBP5.43□□□□□ -1.54
UBC1YDR177W CEP3P40969 608 aa5.43□□□□□ -1.54
UBC1YDR177W BRE2P43132 505 aa5.43□□□□□ -1.54
UBC1YDR177W HXT16P47185 567 aa5.43□□□□□ -1.54
UBC1YDR177W ENV11P53246 860 aa5.43□□□□□ -1.54
UBC1YDR177W ECM38Q05902 660 aaPredicted RBP5.43□□□□□ -1.54
UBC1YDR177W PSF3Q12146 194 aa5.43□□□□□ -1.54
UBC1YDR177W CLF1Q12309 687 aaPredicted RBP5.43□□□□□ -1.54
UBC1YDR177W NOP56Q12460 504 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
UBC1YDR177W FOB1O13329 566 aa5.42□□□□□ -1.54
UBC1YDR177W NOT3P06102 836 aaKnown RBP5.42□□□□□ -1.54
UBC1YDR177W RPS21AP0C0V8 87 aaKnown RBP5.42□□□□□ -1.54
UBC1YDR177W ACE2P21192 770 aa5.42□□□□□ -1.54
UBC1YDR177W XRS2P33301 854 aa5.42□□□□□ -1.54
UBC1YDR177W APL2P36000 726 aaPredicted RBP5.42□□□□□ -1.54
UBC1YDR177W POA1P38218 177 aa5.42□□□□□ -1.54
UBC1YDR177W YHL012WP38709 493 aa5.42□□□□□ -1.54
UBC1YDR177W NDE1P40215 560 aa5.42□□□□□ -1.54
UBC1YDR177W HOS4P40480 1083 aa5.42□□□□□ -1.54
UBC1YDR177W ALT1P52893 592 aa5.42□□□□□ -1.54
UBC1YDR177W ZIP2P53061 704 aa5.42□□□□□ -1.54
UBC1YDR177W PCL10P53124 433 aa5.42□□□□□ -1.54
UBC1YDR177W TRS130Q03660 1102 aa5.42□□□□□ -1.54
UBC1YDR177W LRS4Q04087 347 aaKnown RBP5.42□□□□□ -1.54
UBC1YDR177W HIM1Q06674 414 aa5.42□□□□□ -1.54
UBC1YDR177W NUR1Q12066 484 aa5.42□□□□□ -1.54
UBC1YDR177W ARP7Q12406 477 aa5.42□□□□□ -1.54
UBC1YDR177W YOL087CQ99247 1116 aa5.42□□□□□ -1.54
UBC1YDR177W GPM1P00950 247 aaKnown RBP5.41□□□□□ -1.54
UBC1YDR177W RPS4AP0CX35 261 aaKnown RBP5.41□□□□□ -1.54
UBC1YDR177W RPS4BP0CX36 261 aaKnown RBP5.41□□□□□ -1.54
UBC1YDR177W SEC18P18759 758 aaKnown RBP5.41□□□□□ -1.54
UBC1YDR177W BEM3P32873 1128 aa5.41□□□□□ -1.54
UBC1YDR177W MDL2P33311 773 aa5.41□□□□□ -1.54
UBC1YDR177W MDJ1P35191 511 aa5.41□□□□□ -1.54
UBC1YDR177W RRN3P36070 627 aa5.41□□□□□ -1.54
UBC1YDR177W YKR051WP36142 418 aa5.41□□□□□ -1.54
UBC1YDR177W SRP68P38687 599 aaKnown RBP5.41□□□□□ -1.54
UBC1YDR177W SFB2P53953 876 aa5.41□□□□□ -1.54
UBC1YDR177W TIM50Q02776 476 aa5.41□□□□□ -1.54
UBC1YDR177W HLR1Q04429 423 aa5.41□□□□□ -1.54
UBC1YDR177W SVS1Q12254 260 aa5.41□□□□□ -1.54
UBC1YDR177W MED1Q12321 566 aa5.41□□□□□ -1.54
UBC1YDR177W NSI1Q12457 570 aa5.41□□□□□ -1.54
UBC1YDR177W TRK1P12685 1235 aa5.4□□□□□ -1.54
UBC1YDR177W MIH1P23748 554 aa5.4□□□□□ -1.54
UBC1YDR177W YCL002CP25565 263 aa5.4□□□□□ -1.54
UBC1YDR177W SER1P33330 395 aaKnown RBP5.4□□□□□ -1.54
UBC1YDR177W MRPL36P36531 177 aa5.4□□□□□ -1.54
UBC1YDR177W SMK1P41808 388 aa5.4□□□□□ -1.54
UBC1YDR177W RAI1P53063 387 aaKnown RBP5.4□□□□□ -1.54
UBC1YDR177W MTC3P53077 123 aa5.4□□□□□ -1.54
UBC1YDR177W YKR011CQ02209 353 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms