RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W GFD1Q04839 188 aaKnown RBP5.4□□□□□ -1.54
CDC28YBR160W HCR1Q05775 265 aaKnown RBP5.4□□□□□ -1.54
CDC28YBR160W OMS1Q06668 471 aa5.4□□□□□ -1.54
CDC28YBR160W ATG23Q06671 453 aa5.4□□□□□ -1.54
CDC28YBR160W MED7Q08278 222 aa5.4□□□□□ -1.54
CDC28YBR160W OSM1P21375 501 aaKnown RBP5.39□□□□□ -1.55
CDC28YBR160W MCM3P24279 971 aaKnown RBP5.39□□□□□ -1.55
CDC28YBR160W IMP2'P32351 346 aa5.39□□□□□ -1.55
CDC28YBR160W STO1P34160 861 aaKnown RBP5.39□□□□□ -1.55
CDC28YBR160W WHI3P34761 661 aaKnown RBP5.39□□□□□ -1.55
CDC28YBR160W RGD1P38339 666 aa5.39□□□□□ -1.55
CDC28YBR160W EFM2P38347 419 aa5.39□□□□□ -1.55
CDC28YBR160W CRG1P38892 291 aaRIP-Chip data5.39□□□□□ -1.55not detected
CDC28YBR160W YAR028WP39548 234 aa5.39□□□□□ -1.55
CDC28YBR160W MMM1P41800 426 aa5.39□□□□□ -1.55
CDC28YBR160W BOP3P53958 396 aa5.39□□□□□ -1.55
CDC28YBR160W VPS64Q03944 604 aa5.39□□□□□ -1.55
CDC28YBR160W OSH2Q12451 1283 aa5.39□□□□□ -1.55
CDC28YBR160W HSP82P02829 709 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W RPS4AP0CX35 261 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W RPS4BP0CX36 261 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W PFK2P16862 959 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
CDC28YBR160W SEC18P18759 758 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W PRP45P28004 379 aaPredicted RBP5.38□□□□□ -1.55
CDC28YBR160W BMH1P29311 267 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W PPG1P32838 368 aa5.38□□□□□ -1.55
CDC28YBR160W YKL091CP33324 310 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W BYE1P36106 594 aa5.38□□□□□ -1.55
CDC28YBR160W TOS1P38288 455 aa5.38□□□□□ -1.55
CDC28YBR160W GDT1P38301 280 aaPredicted RBP5.38□□□□□ -1.55
CDC28YBR160W SEC9P40357 651 aa5.38□□□□□ -1.55
CDC28YBR160W CIT3P43635 486 aa5.38□□□□□ -1.55
CDC28YBR160W YJL049WP47048 450 aa5.38□□□□□ -1.55
CDC28YBR160W ADE16P54113 591 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W VPS72Q03388 795 aa5.38□□□□□ -1.55
CDC28YBR160W RKM2Q03942 479 aa5.38□□□□□ -1.55
CDC28YBR160W NOP6Q07623 225 aaKnown RBP5.38□□□□□ -1.55
CDC28YBR160W AVO1Q08236 1176 aa5.38□□□□□ -1.55
CDC28YBR160W HMI1Q12039 706 aa5.38□□□□□ -1.55
CDC28YBR160W DCS2Q12123 353 aa5.38□□□□□ -1.55
CDC28YBR160W TAH18Q12181 623 aa5.38□□□□□ -1.55
CDC28YBR160W FAS2P19097 1887 aaKnown RBP5.37□□□□□ -1.55
CDC28YBR160W NFS1P25374 497 aa5.37□□□□□ -1.55
CDC28YBR160W URA1P28272 314 aaPredicted RBP5.37□□□□□ -1.55
CDC28YBR160W SWI3P32591 825 aa5.37□□□□□ -1.55
CDC28YBR160W AFG2P32794 780 aa5.37□□□□□ -1.55
CDC28YBR160W CNS1P33313 385 aa5.37□□□□□ -1.55
CDC28YBR160W BMH2P34730 273 aaKnown RBP5.37□□□□□ -1.55
CDC28YBR160W NNK1P36003 928 aa5.37□□□□□ -1.55
CDC28YBR160W SEA4P38164 1038 aa5.37□□□□□ -1.55
CDC28YBR160W SIC1P38634 284 aa5.37□□□□□ -1.55
CDC28YBR160W EFM4P40516 257 aa5.37□□□□□ -1.55
CDC28YBR160W PXA1P41909 870 aa5.37□□□□□ -1.55
CDC28YBR160W EPL1P43572 832 aa5.37□□□□□ -1.55
CDC28YBR160W ERG5P54781 538 aa5.37□□□□□ -1.55
CDC28YBR160W HXT15P54854 567 aa5.37□□□□□ -1.55
CDC28YBR160W RPN7Q06103 429 aaKnown RBP5.37□□□□□ -1.55
CDC28YBR160W SPN1Q06505 410 aaPredicted RBP5.37□□□□□ -1.55
CDC28YBR160W HDA2Q06629 674 aa5.37□□□□□ -1.55
CDC28YBR160W VAC14Q06708 880 aa5.37□□□□□ -1.55
CDC28YBR160W NEW1Q08972 1196 aaKnown RBP5.37□□□□□ -1.55
CDC28YBR160W NUR1Q12066 484 aa5.37□□□□□ -1.55
CDC28YBR160W ADR1P07248 1323 aa5.37□□□□□ -1.55
CDC28YBR160W CYC7P00045 113 aa5.36□□□□□ -1.55
CDC28YBR160W PIF1P07271 859 aa5.36□□□□□ -1.55
CDC28YBR160W ARD1P07347 238 aaPredicted RBP5.36□□□□□ -1.55
CDC28YBR160W GCD1P09032 578 aaPredicted RBP5.36□□□□□ -1.55
CDC28YBR160W SPO11P23179 398 aa5.36□□□□□ -1.55
CDC28YBR160W RRP43P25359 394 aaPredicted RBP5.36□□□□□ -1.55
CDC28YBR160W PUB1P32588 453 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
CDC28YBR160W APL2P36000 726 aaPredicted RBP5.36□□□□□ -1.55
CDC28YBR160W ADD66P36040 267 aa5.36□□□□□ -1.55
CDC28YBR160W OMA1P36163 345 aa5.36□□□□□ -1.55
CDC28YBR160W BCD1P38772 366 aa5.36□□□□□ -1.55
CDC28YBR160W RPN10P38886 268 aaKnown RBP5.36□□□□□ -1.55
CDC28YBR160W RIO2P40160 425 aaKnown RBP5.36□□□□□ -1.55
CDC28YBR160W OYE3P41816 400 aaPredicted RBP5.36□□□□□ -1.55
CDC28YBR160W RPS0BP46654 252 aaKnown RBP5.36□□□□□ -1.55
CDC28YBR160W YBP2P53169 641 aa5.36□□□□□ -1.55
CDC28YBR160W YNL193WP53870 558 aa5.36□□□□□ -1.55
CDC28YBR160W UBP16Q02863 499 aa5.36□□□□□ -1.55
CDC28YBR160W GDE1Q02979 1223 aa5.36□□□□□ -1.55
CDC28YBR160W PRP3Q03338 469 aaPredicted RBP5.36□□□□□ -1.55
CDC28YBR160W RSA3Q05942 220 aaKnown RBP5.36□□□□□ -1.55
CDC28YBR160W EST2Q06163 884 aa5.36□□□□□ -1.55
CDC28YBR160W YPL225WQ08971 146 aaKnown RBP5.36□□□□□ -1.55
CDC28YBR160W GET3Q12154 354 aaKnown RBP5.36□□□□□ -1.55
CDC28YBR160W RUD3Q12234 484 aaKnown RBP5.36□□□□□ -1.55
CDC28YBR160W YOR131CQ12486 218 aa5.36□□□□□ -1.55
CDC28YBR160W RMP1Q12530 201 aa5.36□□□□□ -1.55
CDC28YBR160W YRF1-3P0CX14 1859 aa5.35□□□□□ -1.55
CDC28YBR160W YRF1-7P0CX15 1859 aa5.35□□□□□ -1.55
CDC28YBR160W YRF1-6P53819 1859 aa5.35□□□□□ -1.55
CDC28YBR160W ECM32P32644 1121 aaKnown RBP5.35□□□□□ -1.55
CDC28YBR160W RER2P35196 286 aa5.35□□□□□ -1.55
CDC28YBR160W SWH1P35845 1188 aa5.35□□□□□ -1.55
CDC28YBR160W SPC42P36094 363 aa5.35□□□□□ -1.55
CDC28YBR160W YSW1P38280 609 aa5.35□□□□□ -1.55
CDC28YBR160W SPT8P38915 602 aa5.35□□□□□ -1.55
CDC28YBR160W FYV8P46949 817 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms