RNA–Protein interactions for RNA: YBR154C

RPB5, Transcript of RNA polymerase subunit ABC27, yeast

Gene RPB5, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPB5	YBR154C	MRPS35	P53292	345 aa		4.2	□□□□□ -1.74
RPB5	YBR154C	LGE1	Q02796	332 aa	Known RBP	4.2	□□□□□ -1.74
RPB5	YBR154C	NRG1	Q03125	231 aa		4.2	□□□□□ -1.74
RPB5	YBR154C	RSC3	Q06639	885 aa		4.2	□□□□□ -1.74
RPB5	YBR154C	YDL124W	Q07551	312 aa	Known RBP	4.2	□□□□□ -1.74
RPB5	YBR154C	MRH1	Q12117	320 aa	Predicted RBP	4.2	□□□□□ -1.74
RPB5	YBR154C	YOR022C	Q12204	715 aa		4.2	□□□□□ -1.74
RPB5	YBR154C	PRP4	P20053	465 aa	Known RBP	4.19	□□□□□ -1.74
RPB5	YBR154C	EMC3	P36039	253 aa		4.19	□□□□□ -1.74
RPB5	YBR154C	YBR053C	P38235	358 aa		4.19	□□□□□ -1.74
RPB5	YBR154C	SAK1	P38990	1142 aa		4.19	□□□□□ -1.74
RPB5	YBR154C	YIR042C	P40586	236 aa		4.19	□□□□□ -1.74
RPB5	YBR154C	HUL4	P40985	892 aa		4.19	□□□□□ -1.74
RPB5	YBR154C	UBP6	P43593	499 aa	Known RBP	4.19	□□□□□ -1.74
RPB5	YBR154C	SSY5	P47002	699 aa		4.19	□□□□□ -1.74
RPB5	YBR154C	HSV2	P50079	448 aa	Predicted RBP	4.19	□□□□□ -1.74
RPB5	YBR154C	MUS81	Q04149	632 aa	Predicted RBP	4.19	□□□□□ -1.74
RPB5	YBR154C	YLR415C	O13578	112 aa		4.18	□□□□□ -1.74
RPB5	YBR154C	HCA4	P20448	770 aa	Known RBP	4.18	□□□□□ -1.74
RPB5	YBR154C	PAM1	P37304	830 aa	Known RBP	4.18	□□□□□ -1.74
RPB5	YBR154C	REH1	Q06709	432 aa		4.18	□□□□□ -1.74
RPB5	YBR154C	NDJ1	Q12366	352 aa		4.18	□□□□□ -1.74
RPB5	YBR154C	LAT1	P12695	482 aa	Known RBP	4.17	□□□□□ -1.74
RPB5	YBR154C	TOP3	P13099	656 aa		4.17	□□□□□ -1.74
RPB5	YBR154C	RAD4	P14736	754 aa		4.17	□□□□□ -1.74
RPB5	YBR154C	PCL5	P38794	229 aa		4.17	□□□□□ -1.74
RPB5	YBR154C	SET5	P38890	526 aa	Known RBP	4.17	□□□□□ -1.74
RPB5	YBR154C	PFA3	P42836	336 aa		4.17	□□□□□ -1.74
RPB5	YBR154C	TAD1	P53065	400 aa		4.17	□□□□□ -1.74
RPB5	YBR154C	YGR125W	P53273	1036 aa		4.17	□□□□□ -1.74
RPB5	YBR154C	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RPB5	YBR154C	TOM70	P07213	617 aa	Known RBP	4.16	□□□□□ -1.74
RPB5	YBR154C	YDR514C	Q04408	483 aa		4.16	□□□□□ -1.74
RPB5	YBR154C	SGO1	Q08490	590 aa		4.16	□□□□□ -1.74
RPB5	YBR154C	ATG11	Q12527	1178 aa		4.16	□□□□□ -1.74
RPB5	YBR154C	CIT1	P00890	479 aa		4.15	□□□□□ -1.75
RPB5	YBR154C	KIN3	P22209	435 aa		4.15	□□□□□ -1.75
RPB5	YBR154C	TDP1	P38319	544 aa		4.15	□□□□□ -1.75
RPB5	YBR154C	SIC1	P38634	284 aa		4.15	□□□□□ -1.75
RPB5	YBR154C	TIM54	P47045	478 aa		4.15	□□□□□ -1.75
RPB5	YBR154C	YGR283C	P53336	341 aa	Predicted RBP	4.15	□□□□□ -1.75
RPB5	YBR154C	SSL2	Q00578	843 aa		4.15	□□□□□ -1.75
RPB5	YBR154C	LRS4	Q04087	347 aa	Known RBP	4.15	□□□□□ -1.75
RPB5	YBR154C	HIS7	P33734	552 aa	Known RBP	4.14	□□□□□ -1.75
RPB5	YBR154C	YBR259W	P38338	688 aa		4.14	□□□□□ -1.75
RPB5	YBR154C	GGA2	P38817	585 aa	Known RBP	4.14	□□□□□ -1.75
RPB5	YBR154C	FMP52	P40008	231 aa		4.14	□□□□□ -1.75
RPB5	YBR154C	SHR5	P41912	237 aa		4.14	□□□□□ -1.75
RPB5	YBR154C	YJL049W	P47048	450 aa		4.14	□□□□□ -1.75
RPB5	YBR154C	MTR3	P48240	250 aa	Predicted RBP	4.14	□□□□□ -1.75
RPB5	YBR154C	ZDS1	P50111	915 aa	Known RBP	4.14	□□□□□ -1.75
RPB5	YBR154C	TAF8	Q03750	510 aa		4.14	□□□□□ -1.75
RPB5	YBR154C	IRC13	Q08630	104 aa		4.14	□□□□□ -1.75
RPB5	YBR154C	THI21	Q08975	551 aa		4.14	□□□□□ -1.75
RPB5	YBR154C	DMC1	P25453	334 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	YCL002C	P25565	263 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	ILV6	P25605	309 aa	Known RBP	4.13	□□□□□ -1.75
RPB5	YBR154C	PPZ2	P33329	710 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	CBR1	P38626	284 aa	Known RBP	4.13	□□□□□ -1.75
RPB5	YBR154C	GYP8	P43570	497 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	ALG2	P43636	503 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	TEL2	P53038	688 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	VPS73	P53142	486 aa	Known RBP	4.13	□□□□□ -1.75
RPB5	YBR154C	YAP1802	P53309	568 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	TGL5	Q12043	749 aa		4.13	□□□□□ -1.75
RPB5	YBR154C	BCD1	P38772	366 aa		4.12	□□□□□ -1.75
RPB5	YBR154C	YIL166C	P40445	542 aa		4.12	□□□□□ -1.75
RPB5	YBR154C	SNM1	P40993	198 aa		4.12	□□□□□ -1.75
RPB5	YBR154C	YBP2	P53169	641 aa		4.12	□□□□□ -1.75
RPB5	YBR154C	ATP25	Q03153	612 aa		4.12	□□□□□ -1.75
RPB5	YBR154C	GAD1	Q04792	585 aa		4.12	□□□□□ -1.75
RPB5	YBR154C	DIF1	O13577	133 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	REV7	P38927	245 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	RLP7	P40693	322 aa	Known RBP	4.11	□□□□□ -1.75
RPB5	YBR154C	TAH11	P47112	604 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	UBC11	P52492	156 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	ZIP2	P53061	704 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	MET7	Q08645	548 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	FLC1	Q08967	793 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	YBR182C-A	Q8TGU6	64 aa		4.11	□□□□□ -1.75
RPB5	YBR154C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
RPB5	YBR154C	MET6	P05694	767 aa	Known RBP	4.1	□□□□□ -1.75
RPB5	YBR154C	TUB1	P09733	447 aa	Known RBP	4.1	□□□□□ -1.75
RPB5	YBR154C	PEX2	P32800	271 aa		4.1	□□□□□ -1.75
RPB5	YBR154C	ECM1	P39715	212 aa		4.1	□□□□□ -1.75
RPB5	YBR154C	HOS4	P40480	1083 aa		4.1	□□□□□ -1.75
RPB5	YBR154C	NOP7	P53261	605 aa	Known RBP	4.1	□□□□□ -1.75
RPB5	YBR154C	RIX1	P38883	763 aa	Predicted RBP	4.09	□□□□□ -1.75
RPB5	YBR154C	COQ11	Q05892	277 aa		4.09	□□□□□ -1.75
RPB5	YBR154C	SUT2	Q12286	268 aa		4.09	□□□□□ -1.75
RPB5	YBR154C	SPC29	P33419	253 aa		4.08	□□□□□ -1.76
RPB5	YBR154C	YHR020W	P38708	688 aa	Known RBP	4.08	□□□□□ -1.76
RPB5	YBR154C	YJL206C	P39529	758 aa		4.08	□□□□□ -1.76
RPB5	YBR154C	BNR1	P40450	1375 aa		4.08	□□□□□ -1.76
RPB5	YBR154C	BAP3	P41815	604 aa		4.08	□□□□□ -1.76
RPB5	YBR154C	IMO32	P53219	342 aa		4.08	□□□□□ -1.76
RPB5	YBR154C	SMX3	P54999	86 aa	Predicted RBP	4.08	□□□□□ -1.76
RPB5	YBR154C	ASM4	Q05166	528 aa		4.08	□□□□□ -1.76
RPB5	YBR154C	GPR1	Q12361	961 aa		4.08	□□□□□ -1.76
RPB5	YBR154C	YNL162W-A	Q3E7A8	72 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms