RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 BTLAQ7Z6A9 289 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 EPS8L3Q8TE67 593 aaKnown RBP7.14□□□□□ -1.27
VRK2-208ENST00000463222 DNAJC25Q9H1X3 360 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 ANKIB1Q9P2G1 1089 aa7.14□□□□□ -1.27
VRK2-208ENST00000463222 RTCBQ9Y3I0 505 aaKnown RBP7.14□□□□□ -1.27
VRK2-208ENST00000463222 FIGNL2A6NMB9 653 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 UBAP1LF5GYI3 381 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 ATP4AP20648 1035 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 MSX1P28360 303 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 TRIP4Q15650 581 aaPredicted RBP7.13□□□□□ -1.27
VRK2-208ENST00000463222 IER5Q5VY09 327 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 LYSMD3Q7Z3D4 306 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 TMEM151AQ8N4L1 468 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
VRK2-208ENST00000463222 RNF217Q8TC41 542 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 CCDC74AQ96AQ1 378 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 ZFYVE28Q9HCC9 887 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 TIMMDC1Q9NPL8 285 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 METTL5Q9NRN9 209 aaKnown RBP7.13□□□□□ -1.27
VRK2-208ENST00000463222 SPG7Q9UQ90 795 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 KCNMB2Q9Y691 235 aa7.13□□□□□ -1.27
VRK2-208ENST00000463222 POLR3DP05423 398 aaPredicted RBP7.12□□□□□ -1.27
VRK2-208ENST00000463222 EIF4BP23588 611 aaKnown RBP7.12□□□□□ -1.27
VRK2-208ENST00000463222 RASSF7Q02833 373 aa7.12□□□□□ -1.27
VRK2-208ENST00000463222 FRMD6Q96NE9 622 aa7.12□□□□□ -1.27
VRK2-208ENST00000463222 OSBPL7Q9BZF2 842 aa7.12□□□□□ -1.27
VRK2-208ENST00000463222 ACBD3Q9H3P7 528 aa7.12□□□□□ -1.27
VRK2-208ENST00000463222 ELP3Q9H9T3 547 aa7.12□□□□□ -1.27
VRK2-208ENST00000463222 CAPN10Q9HC96 672 aa7.12□□□□□ -1.27
VRK2-208ENST00000463222 TMEM63CQ9P1W3 806 aa7.12□□□□□ -1.27
VRK2-208ENST00000463222 FNDC3AQ9Y2H6 1198 aaKnown RBP7.12□□□□□ -1.27
VRK2-208ENST00000463222 A0A1W2PNR3 127 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 GDF11O95390 407 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 GRNP28799 593 aaKnown RBP7.11□□□□□ -1.27
VRK2-208ENST00000463222 XKR5Q6UX68 686 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 CCDC155Q8N6L0 562 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 CNTNAP3BQ96NU0 1288 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 COL25A1Q9BXS0 654 aaPredicted RBP7.11□□□□□ -1.27
VRK2-208ENST00000463222 CNTNAP3Q9BZ76 1288 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 TGIF2Q9GZN2 237 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 ADAMTS8Q9UP79 889 aa7.11□□□□□ -1.27
VRK2-208ENST00000463222 PHACTR2O75167 634 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 SLURP2P0DP57 97 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 TNNI2P48788 182 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 CEP63Q96MT8 703 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 CCSER2Q9H7U1 834 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 GPAMQ9HCL2 828 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 NLRP2Q9NX02 1062 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.1□□□□□ -1.27
VRK2-208ENST00000463222 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
VRK2-208ENST00000463222 GJA3Q9Y6H8 435 aa7.1□□□□□ -1.27
VRK2-208ENST00000463222 SLC35F4A4IF30 521 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 SF3A1Q15459 793 aaKnown RBP7.09□□□□□ -1.27
VRK2-208ENST00000463222 ZNF394Q53GI3 561 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 WDR44Q5JSH3 913 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 ZNF385CQ66K41 422 aaPredicted RBP7.09□□□□□ -1.27
VRK2-208ENST00000463222 PDE12Q6L8Q7 609 aaKnown RBP7.09□□□□□ -1.27
VRK2-208ENST00000463222 C1orf127Q8N9H9 656 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 SNX29Q8TEQ0 813 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 CRELD1Q96HD1 420 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 RUBCNLQ9H714 662 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 C12orf49Q9H741 205 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 CNTN3Q9P232 1028 aa7.09□□□□□ -1.27
VRK2-208ENST00000463222 A0A1B0GTH6 734 aa7.08□□□□□ -1.28
VRK2-208ENST00000463222 XYLBO75191 536 aa7.08□□□□□ -1.28
VRK2-208ENST00000463222 ITGA6P23229 1130 aa7.08□□□□□ -1.28
VRK2-208ENST00000463222 NXPE4Q6UWF7 544 aa7.08□□□□□ -1.28
VRK2-208ENST00000463222 TINF2Q9BSI4 451 aa7.08□□□□□ -1.28
VRK2-208ENST00000463222 NPHS2Q9NP85 383 aa7.08□□□□□ -1.28
VRK2-208ENST00000463222 PCDHGB7Q9Y5F8 929 aa7.08□□□□□ -1.28
VRK2-208ENST00000463222 EREGO14944 169 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 GADD45BO75293 160 aaPredicted RBP7.07□□□□□ -1.28
VRK2-208ENST00000463222 RACK1P63244 317 aaKnown RBP7.07□□□□□ -1.28
VRK2-208ENST00000463222 TYRO3Q06418 890 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 RNFT1Q5M7Z0 435 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 MEI1Q5TIA1 1274 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 SVOPQ8N4V2 548 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 UBXN4Q92575 508 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 GAS2L1Q99501 681 aaPredicted RBP7.07□□□□□ -1.28
VRK2-208ENST00000463222 TANGO6Q9C0B7 1094 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 ZCCHC2Q9C0B9 1178 aaKnown RBP7.07□□□□□ -1.28
VRK2-208ENST00000463222 CHRDQ9H2X0 955 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.07□□□□□ -1.28
VRK2-208ENST00000463222 USP31Q70CQ4 1352 aa7.07□□□□□ -1.28
VRK2-208ENST00000463222 ARHGEF15O94989 841 aa7.06□□□□□ -1.28
VRK2-208ENST00000463222 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
VRK2-208ENST00000463222 EPB42P16452 691 aa7.06□□□□□ -1.28
VRK2-208ENST00000463222 BCO2Q9BYV7 579 aa7.06□□□□□ -1.28
VRK2-208ENST00000463222 DDX41Q9UJV9 622 aaKnown RBP7.06□□□□□ -1.28
VRK2-208ENST00000463222 GIPC1O14908 333 aa7.05□□□□□ -1.28
VRK2-208ENST00000463222 TAF1CQ15572 869 aaPredicted RBP7.05□□□□□ -1.28
VRK2-208ENST00000463222 TTC39BQ5VTQ0 682 aaPredicted RBP7.05□□□□□ -1.28
VRK2-208ENST00000463222 USP48Q86UV5 1035 aa7.05□□□□□ -1.28
VRK2-208ENST00000463222 NLRP13Q86W25 1043 aa7.05□□□□□ -1.28
VRK2-208ENST00000463222 GALNT12Q8IXK2 581 aa7.05□□□□□ -1.28
VRK2-208ENST00000463222 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
VRK2-208ENST00000463222 PRKAG2Q9UGJ0 569 aa7.05□□□□□ -1.28
VRK2-208ENST00000463222 GGT7Q9UJ14 662 aa7.05□□□□□ -1.28
VRK2-208ENST00000463222 SASH3O75995 380 aa7.04□□□□□ -1.28
VRK2-208ENST00000463222 IGHA1P01876 353 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms