RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Gm7347D3YYI9 267 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Exoc1Q8R3S6 894 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Vps16Q920Q4 839 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Trpc3Q9QZC1 836 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Tmem67Q8BR76 992 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Slc26a8Q8R0C3 999 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ube3aO08759 870 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Apaf1O88879 1249 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Gbp5Q8CFB4 590 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Amotl1Q9D4H4 968 aa10.57□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Vps8Q0P5W1 1427 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 HellsQ60848 821 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ankib1Q6ZPS6 1085 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Rab44Q8CB87 725 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Enox2Q8R0Z2 598 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Shroom4Q1W617 1475 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Atp6v0a2P15920 856 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Plcb3P51432 1234 aaKnown RBP10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Znf697Q569E7 569 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ltv1Q6NSQ7 470 aaKnown RBP10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Apol7bB1AQP7 369 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Dapk3O54784 448 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Actr5Q80US4 605 aaKnown RBP10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Dph6Q9CQ28 267 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Mrpl44Q9CY73 333 aaKnown RBP10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Bicdl1A0JNT9 577 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Krt90E9Q1Z0 538 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Taf4bG5E8Z2 855 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Dbn1Q9QXS6 706 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Dync1i1O88485 628 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 VeztQ3ZK22 780 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ggnbp2Q5SV77 696 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ptpn14Q62130 1189 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 4931400O07RikQ9D4M5 137 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Gipc1Q9Z0G0 333 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Traf1P39428 409 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Capza3P70190 299 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ubxn1Q922Y1 297 aa10.56□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Fhdc1Q3ULZ2 1149 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Swap70Q6A028 585 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Rnf41Q8BH75 317 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Rfwd2Q9R1A8 733 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Eef2P58252 858 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Rbm27Q5SFM8 1060 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Klhl30Q8C3F7 581 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Sugp2Q8CH09 1067 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Atad3Q925I1 591 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 JmyQ9QXM1 983 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ncoa2Q61026 1462 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Kmt5bQ3U8K7 883 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Limch1Q3UH68 1057 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Trim17Q7TPM3 477 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Nup62clA2AG10 272 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Atp2a1Q8R429 994 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Smc6Q924W5 1097 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ophn1Q99J31 802 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 NgdnQ9DB96 315 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Mtmr3Q8K296 1196 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Gtpbp4Q99ME9 634 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ccdc94Q9D6J3 314 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Krt8P11679 490 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 ClgnP52194 611 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Clasp2Q8BRT1 1286 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ddx54Q8K4L0 874 aaKnown RBP10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Nuf2Q99P69 463 aa10.55□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Cdc37l1Q9CZP7 335 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Puf60Q3UEB3 564 aaKnown RBP10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Fmnl3Q6ZPF4 1028 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Usp37Q8C0R0 979 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Zkscan7E9PVW1 718 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 GabpaQ00422 454 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Zfyve27Q3TXX3 415 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Krt79Q8VED5 531 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Spg7Q3ULF4 781 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Rnf168Q80XJ2 565 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 CacybpQ9CXW3 229 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Cux2P70298 1426 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Mcm4P49717 862 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 RilpQ5ND29 369 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Plekhg5Q66T02 1073 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Nudcd3Q8R1N4 363 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Stx6Q9JKK1 255 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 TprnA2AI08 749 aaKnown RBP10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Krt13P08730 437 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Syt1P46096 421 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 EsrrbQ61539 433 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Zmynd15Q8C0R7 736 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Ddx27Q921N6 760 aaKnown RBP10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Drc3Q9D5E4 523 aa10.54□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Maco1Q7TQE6 664 aaKnown RBP10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Znf365Q8BG89 408 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Tcp11l1Q8BTG3 509 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Triml1Q8BVP1 470 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Egfem1Q8C088 590 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Mcur1Q9CXD6 340 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Egfl6Q9JJZ5 550 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Pabpn1lQ5XFR0 273 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 RragbQ6NTA4 374 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Cog7Q3UM29 770 aa10.53□□□□□ -0.72
Col6a5-201ENSMUST00000165165 Trim6Q8BGE7 488 aa10.53□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 36.2 ms