RNA–Protein interactions for RNA: ENSMUST00000116492.2

Ubp1-203, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ubp1, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-203ENSMUST00000116492 Mctp2Q5RJH2 878 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Tceanc2Q8R2M0 207 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Erich6bQ9D4S6 220 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Sos2Q02384 1333 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Eya2O08575 532 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Rrp12Q6P5B0 1295 aaKnown RBP28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Kank4Q6P9J5 1016 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Zfp113Q8C689 439 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Cep57l1Q8VDS7 400 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Igbp1bQ9QZ29 343 aa28.61■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Ciao1Q99KN2 339 aa28.6■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Acsbg1Q99PU5 721 aa28.6■■■□□ 2.17
Ubp1-203ENSMUST00000116492 PappaQ8R4K8 1624 aa28.6■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Crb1Q8VHS2 1405 aa28.6■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Rnf214Q8BFU3 668 aaKnown RBP28.6■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Mb21d2Q8C525 428 aa28.6■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Shank3Q4ACU6 1730 aa28.6■■■□□ 2.17
Ubp1-203ENSMUST00000116492 ZyxQ62523 564 aa28.59■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Usp44Q8C2S0 711 aa28.59■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Fam184aE9PW83 1143 aa28.58■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Tmem266Q8BZB3 538 aa28.58■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Chmp3Q9CQ10 224 aa28.58■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Rdm1Q9CQK3 281 aa28.58■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Mad1l1Q9WTX8 717 aaKnown RBP28.58■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Leo1Q5XJE5 667 aa28.58■■■□□ 2.17
Ubp1-203ENSMUST00000116492 Atp8b3Q6UQ17 1335 aa28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Timm10P62073 90 aa28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Tsr2Q8C8T8 191 aa28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Lrrfip2Q91WK0 415 aa28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 EappQ5BU09 281 aa28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Ankib1Q6ZPS6 1085 aa28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Ppp1r10Q80W00 888 aaKnown RBP28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Krt25Q8VCW2 446 aa28.57■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Zscan25B2RX31 543 aa28.56■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Ccdc66Q6NS45 935 aa28.56■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Gnl3lQ6PGG6 577 aaKnown RBP28.56■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Zscan22Q8BGS5 496 aa28.56■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Golim4Q8BXA1 655 aa28.56■■■□□ 2.16
Ubp1-203ENSMUST00000116492 E4f1Q8CCE9 783 aa28.56■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Irgm2A0A140LIF8 407 aa28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Stat1P42225 749 aa28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Nap1l3Q794H2 544 aa28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Asap2Q7SIG6 958 aa28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Samm50Q8BGH2 469 aa28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Npc1l1Q6T3U4 1333 aa28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Smg7Q5RJH6 1138 aaKnown RBP28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Pdcl2Q78Y63 240 aa28.55■■■□□ 2.16
Ubp1-203ENSMUST00000116492 NpeppsQ11011 920 aa28.54■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Ccnl1Q52KE7 532 aaKnown RBP28.54■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Nup88Q8CEC0 753 aaKnown RBP28.54■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Dhx16G3X8X0 1044 aaKnown RBP28.54■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Ppil4Q9CXG3 492 aaKnown RBP28.54■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Sipa1l3G3X9J0 1776 aa28.54■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Brwd3A2AHJ4 1799 aa28.53■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Ttc19Q8CC21 365 aa28.53■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Cap2Q9CYT6 476 aa28.53■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Ccdc129Q14B48 1034 aa28.52■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Naa30Q8CES0 364 aa28.52■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Cd22P35329 862 aa28.52■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Kcnn1Q9EQR3 537 aa28.52■■■□□ 2.16
Ubp1-203ENSMUST00000116492 Esyt1Q3U7R1 1092 aaKnown RBP28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Ptcd1Q8C2E4 695 aaKnown RBP28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Wdr24Q8CFJ9 790 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Ccdc173A0JLY1 547 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Pcmtd1P59913 357 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Ctdnep1Q3TP92 244 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Zfp51Q3U4L8 781 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Babam1Q3UI43 333 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Me3Q8BMF3 604 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 PdcQ9QW08 244 aa28.51■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Nav1Q8CH77 1875 aa28.5■■■□□ 2.15
Ubp1-203ENSMUST00000116492 ApobrQ8VBT6 942 aa28.5■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Gigyf1Q99MR1 1044 aaKnown RBP28.5■■■□□ 2.15
Ubp1-203ENSMUST00000116492 ZwintQ9CQU5 252 aa28.5■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Kdm3aQ6PCM1 1323 aa28.5■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Chd1lQ9CXF7 900 aa28.49■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Pus3Q9JI38 481 aa28.49■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Prl7a2O54831 253 aa28.49■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Cyp2d10P24456 504 aa28.49■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Nol10Q5RJG1 687 aaKnown RBP28.49■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Clcn1Q64347 994 aa28.49■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Rrp9Q91WM3 475 aaKnown RBP28.49■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Kcnh4A2A5F7 1018 aa28.48■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Cnnm3Q32NY4 713 aa28.48■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Ccdc158Q8CDI6 1109 aa28.48■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Iffo2Q8R2V2 512 aa28.48■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Pde3aQ9Z0X4 1141 aa28.48■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Sh3bp5Q9Z131 463 aa28.48■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Slc4a1P04919 929 aa28.47■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Olfml1Q8BSH2 233 aa28.47■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Sytl4Q9R0Q1 673 aa28.47■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Rassf8Q8CJ96 419 aa28.46■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Ppp4r3bQ922R5 820 aa28.46■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Zeb2Q9R0G7 1215 aa28.46■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Tnrc6cQ3UHC0 1690 aaKnown RBP28.46■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Clca2Q8BG22 942 aa28.46■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Arap2Q8BZ05 1703 aa28.45■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Plcb3P51432 1234 aaKnown RBP28.45■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Hspd1P63038 573 aaKnown RBP28.45■■■□□ 2.15
Ubp1-203ENSMUST00000116492 Ush1cQ9ES64 910 aa28.45■■■□□ 2.15
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms