RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 PdiltQ9DAN1 588 aa14.37□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Zbtb40Q6PCS8 1258 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Cyp2d11P24457 504 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Cnnm1Q0GA42 951 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 ErfeQ6PGN1 340 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Tmx3Q8BXZ1 456 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Ubn2Q80WC1 1314 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Sv2bQ8BG39 683 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Serpina10Q8R121 448 aa14.36□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Nutm1Q8BHP2 1126 aa14.35□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Gm13023A2A8N2 498 aa14.35□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Dync1i1O88485 628 aa14.35□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Trap1aP19473 224 aa14.35□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Irf9Q61179 399 aa14.35□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Prkab2Q6PAM0 271 aa14.35□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Rbm42Q91V81 474 aaKnown RBP14.35□□□□□ -0.11
Upk3b-201ENSMUST00000062606 ScaperF8VQ70 1398 aaKnown RBP14.34□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Ankrd13dQ6PD24 605 aa14.34□□□□□ -0.11
Upk3b-201ENSMUST00000062606 R3hcc1Q8BSI6 488 aa14.34□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Tbc1d4Q8BYJ6 1307 aa14.34□□□□□ -0.11
Upk3b-201ENSMUST00000062606 Mindy4Q3UQI9 744 aa14.33□□□□□ -0.11
Upk3b-201ENSMUST00000062606 SufuQ9Z0P7 484 aa14.33□□□□□ -0.11
Upk3b-201ENSMUST00000062606 MeiocA2AG06 965 aa14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Cdkn1cP49919 348 aa14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Smarcc1P97496 1104 aa14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Eif3aP23116 1344 aaKnown RBP14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Ercc3P49135 783 aa14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Rassf4Q8CB96 322 aa14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Syde2E9PUP1 1314 aa14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Stk36Q69ZM6 1316 aa14.33□□□□□ -0.12
Upk3b-201ENSMUST00000062606 HalP35492 657 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Klra5Q60652 266 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Kiaa0754Q69ZZ9 979 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Phc3Q8CHP6 981 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Rmi1Q9D4G9 616 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 MypnQ5DTJ9 1315 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 AtrnQ9WU60 1428 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 AK157302I3ITR1 129 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Npy5rO70342 466 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Isca1Q9D924 129 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Myh1Q5SX40 1942 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Prr5lA2AVJ5 370 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Nap1l1P28656 391 aaKnown RBP14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Nol10Q5RJG1 687 aaKnown RBP14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Tmx4Q8C0L0 335 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Zbtb1Q91VL9 713 aa14.32□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Snai1Q02085 264 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Bend3Q6PAL0 825 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Ddx58Q6Q899 926 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Phf20l1Q8CCJ9 1013 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Nup188Q6ZQH8 1759 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Lcmt1A0A0U1RNF2 332 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Traf1P39428 409 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Dydc1Q9D9T0 175 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Frmpd3A0A140LIW3 1774 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Fam198bQ3UPI1 517 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Fbxw10Q5SUS0 1030 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 OscarQ8VBT3 265 aa14.31□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Fkbp4P30416 458 aa14.3□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Col3a1P08121 1464 aa14.3□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Cfap44E9Q5M6 1843 aa14.3□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Gm45140A0A0N4SUM8 220 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Ccdc173A0JLY1 547 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Ankrd44B2RXR6 993 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Fam83gQ5SWY7 812 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Mum1Q6DID5 682 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Kif13bA0A286YCV9 1847 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Col5a2Q3U962 1497 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Gm10093D3YYI8 482 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Hdac1O09106 482 aaKnown RBP14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 HmcesQ8R1M0 353 aaKnown RBP14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Pes1Q9EQ61 584 aaKnown RBP14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 MvpQ9EQK5 861 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Rapgef4Q9EQZ6 1011 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Tshz1Q5DTH5 1084 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Q8VDP2 222 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Letm1Q9Z2I0 738 aa14.29□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Igfbp6P47880 238 aa14.28□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Ctr9Q62018 1173 aaKnown RBP14.28□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Cgref1Q8R1U2 281 aa14.28□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Ankrd49Q8VE42 238 aa14.28□□□□□ -0.12
Upk3b-201ENSMUST00000062606 RtcbQ99LF4 505 aaKnown RBP14.28□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Nip7Q9CXK8 180 aaKnown RBP14.28□□□□□ -0.12
Upk3b-201ENSMUST00000062606 Ncbp1Q3UYV9 790 aaKnown RBP14.28□□□□□ -0.12
Upk3b-201ENSMUST00000062606 MafgO54790 162 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Ptgs1P22437 602 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Bag4Q8CI61 457 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Amhr2Q8K592 568 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 4930519G04RikQ9CPT7 205 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Col4a5Q63ZW6 1691 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Kif23E9Q5G3 953 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Cnksr2Q80YA9 1032 aa14.27□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Sass6Q80UK7 654 aa14.26□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Inpp5bQ8K337 993 aa14.26□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Hoxa7P02830 229 aa14.26□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Esco1Q69Z69 843 aa14.26□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Ripor2Q80U16 1078 aa14.26□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Ric3Q8BPM6 367 aa14.26□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Bicc1Q99MQ1 977 aaKnown RBP14.26□□□□□ -0.13
Upk3b-201ENSMUST00000062606 Dmrtc1Q9D9R7 182 aa14.26□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms