RNA–Protein interactions for RNA: ENSMUST00000042617.13

Clcnka-201, Transcript of Chloride channel protein ClC-Ka, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcnka, Length 2,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcnka-201ENSMUST00000042617 Krt85Q9Z2T6 507 aa17.04■□□□□ 0.32
Clcnka-201ENSMUST00000042617 TnrQ8BYI9 1358 aa17.04■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Pkp1P97350 728 aaKnown RBP17.04■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Fam53cQ8BXQ8 393 aa17.04■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Sh3bgrQ9WUZ7 214 aa17.04■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Kdm6aO70546 1401 aa17.03■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Surf1P09925 306 aa17.03■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Phf20l1Q8CCJ9 1013 aa17.03■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Mrpl50Q8VDT9 159 aaKnown RBP17.03■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Pcdhgc5Q91XW9 944 aa17.03■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Bcl2l12Q9D3J3 255 aa17.03■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Amotl1Q9D4H4 968 aa17.03■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Pnpla7A2AJ88 1352 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Qtrt2B8ZXI1 415 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Frat1P70339 274 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Irx2P81066 474 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Kcnd1Q03719 651 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Ift57Q8BXG3 429 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Spata32Q8C5V0 334 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Odf2lQ9D478 642 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Mrvi1Q9WUX5 899 aaKnown RBP17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Nid2O88322 1403 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Capn2O08529 700 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Zpr1Q62384 459 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Prdm4Q80V63 803 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Dmrt2Q8BG36 561 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Cep57l1Q8VDS7 400 aa17.02■□□□□ 0.32
Clcnka-201ENSMUST00000042617 Atp10bB1AWN4 1474 aa17.02■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Tom1O88746 492 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Paxbp1P58501 919 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ints4Q8CIM8 964 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Cfap58B2RW38 873 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 1700113H08RikE9Q9Q5 327 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 FanccP50652 591 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Pde3bQ61409 1100 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Tsr2Q8C8T8 191 aa17.01■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Atf5O70191 283 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Trap1aP19473 224 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Cyp2d11P24457 504 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Chpf2Q3UU43 768 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 RbsnQ80Y56 783 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Zmynd15Q8C0R7 736 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Srgap1Q91Z69 1062 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Zfp142G5E869 1843 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Serpinb6bO08804 377 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Arid5bQ8BM75 1188 aaKnown RBP17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Cadps2Q8BYR5 1297 aa17■□□□□ 0.31
Clcnka-201ENSMUST00000042617 EspnlQ3UYR4 1005 aa16.99■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Bicd2Q921C5 820 aa16.99■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Tceal9Q9DD24 104 aa16.99■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ybx3Q9JKB3 361 aaKnown RBP16.99■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ddx11Q6AXC6 880 aa16.99■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ano10Q8BH79 659 aa16.99■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Nup153E9Q3G8 1462 aaKnown RBP16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Bcl9lQ67FY2 1494 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Rbm8a2A0A0N4SUH6 174 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Clec11aO88200 328 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Zkscan4Q5SZT6 480 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Slu7Q8BHJ9 585 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Rbm8aQ9CWZ3 174 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ak2Q9WTP6 239 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Psma5Q9Z2U1 241 aaKnown RBP16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Anks1aP59672 1150 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Kmt5bQ3U8K7 883 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ubxn4Q8VCH8 506 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Gm11983V9GXS8 105 aa16.98■□□□□ 0.31
Clcnka-201ENSMUST00000042617 H2afxP27661 143 aaKnown RBP16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Csrnp1P59054 583 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ubxn10Q8BG34 277 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 R3hcc1Q8BSI6 488 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Kcnk13Q8R1P5 405 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Card10P58660 1021 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Fam228bQ497Q6 232 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ppp1r37Q8BKR5 712 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Me3Q8BMF3 604 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Sp8Q8BMJ8 486 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Taf5lQ91WQ5 589 aa16.97■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Cdhr2E9Q7P9 1308 aa16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 NmiO35309 314 aa16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Stx1aO35526 288 aa16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Lnx1O70263 728 aa16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Dnajc2P54103 621 aaKnown RBP16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Tmem109Q3UBX0 243 aa16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Arglu1Q3UL36 271 aaKnown RBP16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Slc4a10Q5DTL9 1118 aa16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Morc2aQ69ZX6 1030 aa16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Ddx54Q8K4L0 874 aaKnown RBP16.96■□□□□ 0.31
Clcnka-201ENSMUST00000042617 Spag5Q7TME2 1165 aa16.96■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Atg3Q9CPX6 314 aa16.96■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Marf1Q8BJ34 1730 aaKnown RBP16.96■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Adcy9P51830 1353 aa16.95■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Atf7Q8R0S1 413 aa16.95■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Col15a1O35206 1367 aa16.95■□□□□ 0.3
Clcnka-201ENSMUST00000042617 OptnQ8K3K8 584 aa16.95■□□□□ 0.3
Clcnka-201ENSMUST00000042617 ZwintQ9CQU5 252 aa16.95■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Elf2Q9JHC9 593 aa16.95■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Tlr7P58681 1050 aa16.94■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Nkx2-3P97334 362 aa16.94■□□□□ 0.3
Clcnka-201ENSMUST00000042617 Ubash3aQ3V3E1 624 aa16.94■□□□□ 0.3
Clcnka-201ENSMUST00000042617 RgmbQ7TQ33 436 aa16.94■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms