RNA–Protein interactions for RNA: ENSMUST00000023123.14

Col2a1-201, Transcript of Collagen alpha-1(II) chain, mousemouse

TSL 1 (best) BASIC

Gene Col2a1, Length 5,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1-201ENSMUST00000023123 Krt79Q8VED5 531 aa17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ripk4Q9ERK0 786 aa17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Uso1Q9Z1Z0 959 aaKnown RBP17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Gm28510A0A087WP28 240 aa17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Anp32cQ64G17 123 aa17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Sdad1Q80UZ2 687 aaKnown RBP17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Speer4dL7N216 212 aa17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Zbtb43Q9DAI4 467 aa17.33■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ctnna2Q61301 953 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Vamp4O70480 141 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 VeztQ3ZK22 780 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Zswim4Q8C7B8 1101 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Q9D5Q8 446 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Mkrn1Q9QXP6 481 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Atp10dQ8K2X1 1416 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Kdm2bQ6P1G2 1309 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Fam186bD3Z420 943 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Map3k11Q80XI6 850 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Pnpla2Q8BJ56 486 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Six6os1Q9CTN5 574 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Lekr1B2RVN1 116 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Cnnm2Q3TWN3 875 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 RestQ8VIG1 1082 aa17.32■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Disp1Q3TDN0 1521 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Zkscan16A2ALW2 728 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Frat1P70339 274 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Gbp8Q2V6D6 525 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Sun3Q5SS91 320 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Fam160b2Q80YR2 744 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Triml1Q8BVP1 470 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Cnot6lQ8VEG6 555 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Stmn4P63042 189 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 DymQ8CHY3 669 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Atp1a4Q9WV27 1032 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Izumo3A6PWV3 263 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Stx8O88983 236 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 GphnQ8BUV3 769 aaKnown RBP17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Exoc1Q8R3S6 894 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Cul5Q9D5V5 780 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 U2af2P26369 475 aaKnown RBP17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Krt15Q61414 452 aa17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Nol11Q8BJW5 723 aaKnown RBP17.31■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Tagap1P0CAX8 505 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Tnnc1P19123 161 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ranbp1P34022 203 aaKnown RBP17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ccdc114Q3UX62 658 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Fgfr1opQ66JX5 399 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ccdc186Q8C9S4 917 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Calcoco1Q8CGU1 691 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Gtf3c5Q8R2T8 520 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Bicdl1A0JNT9 577 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Oas2E9Q9A9 742 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Tmem132aQ922P8 1018 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 BrapQ99MP8 591 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Rbm33Q9CXK9 1231 aaKnown RBP17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Atp7aQ64430 1491 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Slx4Q6P1D7 1565 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Gm10563F6WIE4 79 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Gm10378F6XQQ1 160 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ifit2Q64112 472 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Tbc1d5Q80XQ2 815 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Nek11Q8C0Q4 628 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ak2Q9WTP6 239 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Zkscan5Q9Z1D8 819 aa17.3■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Rasal2E9PW37 1286 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Gm44503E9PYU5 387 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ppp1r21Q3TDD9 780 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Jmjd4Q8BFT6 427 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Plekho1Q9JIY0 408 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 InsrP15208 1372 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Hmgb1P63158 215 aaKnown RBP17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Pde4dQ01063 747 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Trak2Q6P9N8 913 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Cyp4f39Q8BGU0 532 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ppip5k1A2ARP1 1436 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 F2rP30558 430 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 TrdnE9Q9K5 693 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Spg7Q3ULF4 781 aa17.29■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Grm8P47743 908 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Kiaa1524Q8BWY9 907 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Haus2Q9CQS9 234 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Cyp27a1Q9DBG1 533 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ptgs1P22437 602 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ppp4r3aQ6P2K6 820 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Rbm19Q8R3C6 952 aaKnown RBP17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Rdm1Q9CQK3 281 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Clec11aO88200 328 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Utp18Q5SSI6 552 aaKnown RBP17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Tubb2aQ7TMM9 445 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Tubb2bQ9CWF2 445 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Akap8Q9DBR0 687 aaKnown RBP17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Sept6Q9R1T4 434 aa17.28■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Ncoa3O09000 1398 aa17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 3425401B19RikD3Z1D3 1412 aa17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Eif3j1Q3UGC7 261 aaKnown RBP17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Eif3j2Q66JS6 263 aa17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Cplx4Q80WM3 160 aa17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Amotl1Q9D4H4 968 aa17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Acot9Q9R0X4 439 aaKnown RBP17.27■□□□□ 0.36
Col2a1-201ENSMUST00000023123 Capza3P70190 299 aa17.27■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms