RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm364A2AFI6 671 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Prpmp5E9PXN1 296 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 FpgtG5E8F4 590 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Vmn1r169L7N275 304 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Prdx6O08709 224 aaKnown RBP12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zp3P10761 424 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 RhoP15409 348 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 FstP47931 344 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Wnt11P48615 354 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Teddm2Q208S0 260 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Riiad1Q3KNY5 119 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Shisa3Q3UPR0 238 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 EndouQ3V188 412 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Nptx1Q62443 432 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1344Q7TQV3 321 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Endod1Q8C522 501 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Vmn1r200Q8R281 312 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lpcat2bQ9D5U0 516 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Jam3Q9D8B7 310 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 SpastQ9QYY8 614 aa12.46□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ascc3E9PZJ8 2198 aaKnown RBP12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Auts2A0A087WPF7 1261 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 D3Ertd254eA0A0G2JEM5 796 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm14085A2AWR5 660 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zfp605E9QAH2 694 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm6619F6URP1 175 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr574F8VQ18 346 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr190K7N5T5 307 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Cldn4O35054 210 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Alx4O35137 399 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ifi203O35368 408 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zfp60P16374 707 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Thbs1P35441 1170 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 HlxQ61670 476 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Prm3Q62100 101 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmem255aQ8BHW5 351 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tgif2Q8C0Y1 237 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Cpne1Q8C166 536 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Nsun3Q8CCT7 348 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmcc3Q8R310 477 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr459Q924H8 314 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lap3Q9CPY7 519 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Arv1Q9D0U9 266 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 PtgfrnQ9WV91 879 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ccl27Q9Z1X0 120 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Anapc1P53995 1944 aaKnown RBP12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ighv1-13A0A075B5I0 98 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1314A2AVL6 312 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm17728E9Q5K2 132 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Prl8a2O54832 240 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fcn1O70165 334 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tnfaip1O70479 316 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 NelfeP19426 375 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Plin2P43883 425 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Crmp1P97427 572 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 1700066B19RikQ3TS39 127 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 CalcrQ60755 533 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fgl1Q71KU9 314 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr374Q7TRY0 313 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Hs6st2Q80UW0 612 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Otop1Q80VM9 600 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Kbtbd11Q8BNW9 633 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 H1fntQ8CJI4 398 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Clrn1Q8K445 232 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tram1l1Q8QZR0 363 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr881Q8VF63 314 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Hcfc1r1Q9CYQ5 120 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Xrn2Q9DBR1 951 aaKnown RBP12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Brix1Q9DCA5 353 aaKnown RBP12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 RhouQ9EQT3 261 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Grb14Q9JLM9 538 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Uchl1Q9R0P9 223 aa12.45□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm20715E9Q3L7 95 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Vmn1r57K7N731 310 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 IghgP01863 330 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 LplP11152 474 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 S100a1P56565 94 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 PfplQ5RKV8 702 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Smad2Q62432 467 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 St6gal1Q64685 403 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zfp82Q6P9Y7 530 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1031Q7TR87 336 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tspan10Q8VCF5 331 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1Q8VGI1 314 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ripply3Q924S9 152 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Cldnd2Q9D9H2 167 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Spata6lB2RV46 347 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Coq10aE9Q3H6 259 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmem265E9Q8G3 109 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zfp616J3QN14 987 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zfp13P10754 512 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 MatkP41242 505 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 P58686 83 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Csf2raQ00941 388 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Grxcr2Q3TYR5 254 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ankrd53Q3V0J4 497 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr332Q5NC45 344 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm11492Q5ND19 536 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Dio1Q61153 257 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Krba1Q6NXZ1 1043 aa12.44□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 68.3 ms