Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Gm25239-201ENSMUST00000174915 86 ntBASIC34.56■■■■□ 3.12
Cpne1Q8C166 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
Cpne1Q8C166 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cpne1Q8C166 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cpne1Q8C166 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Cpne1Q8C166 Gm15042-201ENSMUST00000120212 883 ntBASIC30.52■■■□□ 2.48
Cpne1Q8C166 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
Cpne1Q8C166 Gm15045-201ENSMUST00000117359 883 ntBASIC29.9■■■□□ 2.38
Cpne1Q8C166 Gm24109-201ENSMUST00000175489 103 ntBASIC29.79■■■□□ 2.36
Cpne1Q8C166 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cpne1Q8C166 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Cpne1Q8C166 Psd-208ENSMUST00000224556 2034 ntBASIC29.21■■■□□ 2.27
Cpne1Q8C166 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cpne1Q8C166 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.01■■■□□ 2.23
Cpne1Q8C166 Gm23366-201ENSMUST00000175022 89 ntBASIC28.9■■■□□ 2.22
Cpne1Q8C166 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cpne1Q8C166 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Cpne1Q8C166 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cpne1Q8C166 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Cpne1Q8C166 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Cpne1Q8C166 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cpne1Q8C166 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cpne1Q8C166 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cpne1Q8C166 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Cpne1Q8C166 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cpne1Q8C166 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cpne1Q8C166 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.28■■■□□ 2.12
Cpne1Q8C166 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Cpne1Q8C166 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cpne1Q8C166 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cpne1Q8C166 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cpne1Q8C166 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
Cpne1Q8C166 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.05■■■□□ 2.08
Cpne1Q8C166 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Cpne1Q8C166 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.92■■■□□ 2.06
Cpne1Q8C166 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.81■■■□□ 2.04
Cpne1Q8C166 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.57■■■□□ 2
Cpne1Q8C166 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Cpne1Q8C166 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Cpne1Q8C166 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Cpne1Q8C166 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.39■■□□□ 1.97
Cpne1Q8C166 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cpne1Q8C166 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cpne1Q8C166 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Cpne1Q8C166 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.29■■□□□ 1.96
Cpne1Q8C166 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cpne1Q8C166 Gm25238-201ENSMUST00000174914 89 ntBASIC27.18■■□□□ 1.94
Cpne1Q8C166 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.18■■□□□ 1.94
Cpne1Q8C166 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Cpne1Q8C166 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cpne1Q8C166 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.1■■□□□ 1.93
Cpne1Q8C166 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Cpne1Q8C166 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Cpne1Q8C166 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cpne1Q8C166 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Cpne1Q8C166 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.98■■□□□ 1.91
Cpne1Q8C166 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Cpne1Q8C166 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Cpne1Q8C166 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Cpne1Q8C166 Gm27325-201ENSMUST00000175467 74 ntBASIC26.81■■□□□ 1.88
Cpne1Q8C166 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Cpne1Q8C166 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.73■■□□□ 1.87
Cpne1Q8C166 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Cpne1Q8C166 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.67■■□□□ 1.86
Cpne1Q8C166 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cpne1Q8C166 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
Cpne1Q8C166 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpne1Q8C166 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
Cpne1Q8C166 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
Cpne1Q8C166 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.54■■□□□ 1.84
Cpne1Q8C166 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cpne1Q8C166 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Cpne1Q8C166 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.46■■□□□ 1.83
Cpne1Q8C166 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cpne1Q8C166 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cpne1Q8C166 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
Cpne1Q8C166 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.38■■□□□ 1.81
Cpne1Q8C166 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.37■■□□□ 1.81
Cpne1Q8C166 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Cpne1Q8C166 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cpne1Q8C166 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.18■■□□□ 1.78
Cpne1Q8C166 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cpne1Q8C166 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.15■■□□□ 1.78
Cpne1Q8C166 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.12■■□□□ 1.77
Cpne1Q8C166 Rab21-202ENSMUST00000218831 843 ntBASIC26.09■■□□□ 1.77
Cpne1Q8C166 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cpne1Q8C166 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Cpne1Q8C166 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Cpne1Q8C166 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Cpne1Q8C166 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.97■■□□□ 1.75
Cpne1Q8C166 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Cpne1Q8C166 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Cpne1Q8C166 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Cpne1Q8C166 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Cpne1Q8C166 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cpne1Q8C166 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.88■■□□□ 1.73
Cpne1Q8C166 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Cpne1Q8C166 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.86■■□□□ 1.73
Cpne1Q8C166 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Cpne1Q8C166 Gm25262-201ENSMUST00000174934 133 ntBASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms