Protein–RNA interactions for Protein: L7N275

Vmn1r169, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r169L7N275 Gm25239-201ENSMUST00000174915 86 ntBASIC37.06■■■■□ 3.52
Vmn1r169L7N275 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Vmn1r169L7N275 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.74■■■□□ 2.99
Vmn1r169L7N275 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Vmn1r169L7N275 Gm15042-201ENSMUST00000120212 883 ntBASIC32.6■■■□□ 2.81
Vmn1r169L7N275 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Vmn1r169L7N275 Gm24109-201ENSMUST00000175489 103 ntBASIC32.02■■■□□ 2.72
Vmn1r169L7N275 Gm15045-201ENSMUST00000117359 883 ntBASIC31.9■■■□□ 2.7
Vmn1r169L7N275 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
Vmn1r169L7N275 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Vmn1r169L7N275 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Vmn1r169L7N275 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Vmn1r169L7N275 Gm23366-201ENSMUST00000175022 89 ntBASIC30.99■■■□□ 2.55
Vmn1r169L7N275 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Vmn1r169L7N275 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Vmn1r169L7N275 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.6■■■□□ 2.49
Vmn1r169L7N275 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Vmn1r169L7N275 Psd-208ENSMUST00000224556 2034 ntBASIC30.34■■■□□ 2.45
Vmn1r169L7N275 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Vmn1r169L7N275 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Vmn1r169L7N275 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Vmn1r169L7N275 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Vmn1r169L7N275 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Vmn1r169L7N275 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
Vmn1r169L7N275 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.02■■■□□ 2.4
Vmn1r169L7N275 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Vmn1r169L7N275 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.92■■■□□ 2.38
Vmn1r169L7N275 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.9■■■□□ 2.38
Vmn1r169L7N275 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Vmn1r169L7N275 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.63■■■□□ 2.33
Vmn1r169L7N275 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Vmn1r169L7N275 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.44■■■□□ 2.3
Vmn1r169L7N275 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.43■■■□□ 2.3
Vmn1r169L7N275 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Vmn1r169L7N275 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
Vmn1r169L7N275 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Vmn1r169L7N275 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Vmn1r169L7N275 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Vmn1r169L7N275 Gm25238-201ENSMUST00000174914 89 ntBASIC29.18■■■□□ 2.26
Vmn1r169L7N275 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.16■■■□□ 2.26
Vmn1r169L7N275 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Vmn1r169L7N275 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.91■■■□□ 2.22
Vmn1r169L7N275 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Vmn1r169L7N275 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.2
Vmn1r169L7N275 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Vmn1r169L7N275 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Vmn1r169L7N275 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Vmn1r169L7N275 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Vmn1r169L7N275 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
Vmn1r169L7N275 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.64■■■□□ 2.18
Vmn1r169L7N275 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.63■■■□□ 2.17
Vmn1r169L7N275 Gm27325-201ENSMUST00000175467 74 ntBASIC28.6■■■□□ 2.17
Vmn1r169L7N275 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Vmn1r169L7N275 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Vmn1r169L7N275 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Vmn1r169L7N275 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.34■■■□□ 2.13
Vmn1r169L7N275 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.34■■■□□ 2.13
Vmn1r169L7N275 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Vmn1r169L7N275 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Vmn1r169L7N275 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.27■■■□□ 2.12
Vmn1r169L7N275 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.26■■■□□ 2.11
Vmn1r169L7N275 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Vmn1r169L7N275 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
Vmn1r169L7N275 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Vmn1r169L7N275 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
Vmn1r169L7N275 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Vmn1r169L7N275 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Vmn1r169L7N275 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Vmn1r169L7N275 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Vmn1r169L7N275 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Vmn1r169L7N275 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Vmn1r169L7N275 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Vmn1r169L7N275 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
Vmn1r169L7N275 Rab21-202ENSMUST00000218831 843 ntBASIC27.96■■■□□ 2.07
Vmn1r169L7N275 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Vmn1r169L7N275 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.9■■■□□ 2.06
Vmn1r169L7N275 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.86■■■□□ 2.05
Vmn1r169L7N275 Gm25262-201ENSMUST00000174934 133 ntBASIC27.86■■■□□ 2.05
Vmn1r169L7N275 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Vmn1r169L7N275 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.84■■■□□ 2.05
Vmn1r169L7N275 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Vmn1r169L7N275 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.82■■■□□ 2.04
Vmn1r169L7N275 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
Vmn1r169L7N275 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Vmn1r169L7N275 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Vmn1r169L7N275 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.64■■■□□ 2.02
Vmn1r169L7N275 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Vmn1r169L7N275 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Vmn1r169L7N275 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.55■■■□□ 2
Vmn1r169L7N275 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.52■■■□□ 2
Vmn1r169L7N275 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Vmn1r169L7N275 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Vmn1r169L7N275 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Vmn1r169L7N275 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Vmn1r169L7N275 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Vmn1r169L7N275 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.38■■□□□ 1.97
Vmn1r169L7N275 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Vmn1r169L7N275 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
Vmn1r169L7N275 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
Vmn1r169L7N275 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms