Protein–RNA interactions for Protein: Q8CJI4

H1fnt, Testis-specific H1 histone, mousemouse

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fntQ8CJI4 Gm25239-201ENSMUST00000174915 86 ntBASIC32.5■■■□□ 2.79
H1fntQ8CJI4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
H1fntQ8CJI4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
H1fntQ8CJI4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
H1fntQ8CJI4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
H1fntQ8CJI4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
H1fntQ8CJI4 Psd-208ENSMUST00000224556 2034 ntBASIC29.32■■■□□ 2.28
H1fntQ8CJI4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
H1fntQ8CJI4 Gm15042-201ENSMUST00000120212 883 ntBASIC29.07■■■□□ 2.24
H1fntQ8CJI4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
H1fntQ8CJI4 Gm15045-201ENSMUST00000117359 883 ntBASIC28.53■■■□□ 2.16
H1fntQ8CJI4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
H1fntQ8CJI4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.38■■■□□ 2.13
H1fntQ8CJI4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
H1fntQ8CJI4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
H1fntQ8CJI4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
H1fntQ8CJI4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
H1fntQ8CJI4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
H1fntQ8CJI4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
H1fntQ8CJI4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
H1fntQ8CJI4 Gm24109-201ENSMUST00000175489 103 ntBASIC27.86■■■□□ 2.05
H1fntQ8CJI4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
H1fntQ8CJI4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
H1fntQ8CJI4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
H1fntQ8CJI4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
H1fntQ8CJI4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
H1fntQ8CJI4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.57■■■□□ 2
H1fntQ8CJI4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
H1fntQ8CJI4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
H1fntQ8CJI4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.36■■□□□ 1.97
H1fntQ8CJI4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
H1fntQ8CJI4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
H1fntQ8CJI4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
H1fntQ8CJI4 Gm23366-201ENSMUST00000175022 89 ntBASIC27.25■■□□□ 1.95
H1fntQ8CJI4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
H1fntQ8CJI4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
H1fntQ8CJI4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
H1fntQ8CJI4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
H1fntQ8CJI4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
H1fntQ8CJI4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
H1fntQ8CJI4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.9■■□□□ 1.9
H1fntQ8CJI4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.88■■□□□ 1.89
H1fntQ8CJI4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
H1fntQ8CJI4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
H1fntQ8CJI4 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.79■■□□□ 1.88
H1fntQ8CJI4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
H1fntQ8CJI4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
H1fntQ8CJI4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.69■■□□□ 1.86
H1fntQ8CJI4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
H1fntQ8CJI4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
H1fntQ8CJI4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
H1fntQ8CJI4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
H1fntQ8CJI4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.22■■□□□ 1.79
H1fntQ8CJI4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
H1fntQ8CJI4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
H1fntQ8CJI4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.14■■□□□ 1.78
H1fntQ8CJI4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
H1fntQ8CJI4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
H1fntQ8CJI4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
H1fntQ8CJI4 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.98■■□□□ 1.75
H1fntQ8CJI4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
H1fntQ8CJI4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
H1fntQ8CJI4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
H1fntQ8CJI4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
H1fntQ8CJI4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
H1fntQ8CJI4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.87■■□□□ 1.73
H1fntQ8CJI4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
H1fntQ8CJI4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
H1fntQ8CJI4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
H1fntQ8CJI4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
H1fntQ8CJI4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.71■■□□□ 1.71
H1fntQ8CJI4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
H1fntQ8CJI4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
H1fntQ8CJI4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
H1fntQ8CJI4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.68■■□□□ 1.7
H1fntQ8CJI4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
H1fntQ8CJI4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
H1fntQ8CJI4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
H1fntQ8CJI4 Gm27325-201ENSMUST00000175467 74 ntBASIC25.59■■□□□ 1.69
H1fntQ8CJI4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
H1fntQ8CJI4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
H1fntQ8CJI4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
H1fntQ8CJI4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
H1fntQ8CJI4 Gm25238-201ENSMUST00000174914 89 ntBASIC25.43■■□□□ 1.66
H1fntQ8CJI4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
H1fntQ8CJI4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
H1fntQ8CJI4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
H1fntQ8CJI4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
H1fntQ8CJI4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
H1fntQ8CJI4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.35■■□□□ 1.65
H1fntQ8CJI4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.34■■□□□ 1.65
H1fntQ8CJI4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
H1fntQ8CJI4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
H1fntQ8CJI4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.28■■□□□ 1.64
H1fntQ8CJI4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
H1fntQ8CJI4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
H1fntQ8CJI4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
H1fntQ8CJI4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
H1fntQ8CJI4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
H1fntQ8CJI4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.17■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms