Protein–RNA interactions for Protein: Q8R310

Tmcc3, Transmembrane and coiled-coil domain protein 3, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmcc3Q8R310 Gm25239-201ENSMUST00000174915 86 ntBASIC31.73■■■□□ 2.67
Tmcc3Q8R310 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Tmcc3Q8R310 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Tmcc3Q8R310 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.77■■■□□ 2.36
Tmcc3Q8R310 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Tmcc3Q8R310 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Tmcc3Q8R310 Psd-208ENSMUST00000224556 2034 ntBASIC28.86■■■□□ 2.21
Tmcc3Q8R310 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Tmcc3Q8R310 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Tmcc3Q8R310 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Tmcc3Q8R310 Gm15042-201ENSMUST00000120212 883 ntBASIC27.99■■■□□ 2.07
Tmcc3Q8R310 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Tmcc3Q8R310 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Tmcc3Q8R310 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Tmcc3Q8R310 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Tmcc3Q8R310 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Tmcc3Q8R310 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.43■■□□□ 1.98
Tmcc3Q8R310 Gm15045-201ENSMUST00000117359 883 ntBASIC27.38■■□□□ 1.97
Tmcc3Q8R310 Gm24109-201ENSMUST00000175489 103 ntBASIC27.35■■□□□ 1.97
Tmcc3Q8R310 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Tmcc3Q8R310 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Tmcc3Q8R310 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Tmcc3Q8R310 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Tmcc3Q8R310 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Tmcc3Q8R310 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
Tmcc3Q8R310 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Tmcc3Q8R310 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Tmcc3Q8R310 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Tmcc3Q8R310 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Tmcc3Q8R310 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Tmcc3Q8R310 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Tmcc3Q8R310 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Tmcc3Q8R310 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
Tmcc3Q8R310 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.55■■□□□ 1.84
Tmcc3Q8R310 Gm23366-201ENSMUST00000175022 89 ntBASIC26.54■■□□□ 1.84
Tmcc3Q8R310 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Tmcc3Q8R310 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Tmcc3Q8R310 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.49■■□□□ 1.83
Tmcc3Q8R310 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Tmcc3Q8R310 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.38■■□□□ 1.81
Tmcc3Q8R310 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Tmcc3Q8R310 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Tmcc3Q8R310 Gm10524-201ENSMUST00000181931 1893 ntBASIC26.19■■□□□ 1.78
Tmcc3Q8R310 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Tmcc3Q8R310 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Tmcc3Q8R310 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Tmcc3Q8R310 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.04■■□□□ 1.76
Tmcc3Q8R310 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Tmcc3Q8R310 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Tmcc3Q8R310 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.93■■□□□ 1.74
Tmcc3Q8R310 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Tmcc3Q8R310 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Tmcc3Q8R310 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
Tmcc3Q8R310 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Tmcc3Q8R310 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.73■■□□□ 1.71
Tmcc3Q8R310 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Tmcc3Q8R310 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.71■■□□□ 1.71
Tmcc3Q8R310 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Tmcc3Q8R310 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Tmcc3Q8R310 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Tmcc3Q8R310 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Tmcc3Q8R310 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Tmcc3Q8R310 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Tmcc3Q8R310 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Tmcc3Q8R310 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.44■■□□□ 1.66
Tmcc3Q8R310 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.42■■□□□ 1.66
Tmcc3Q8R310 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Tmcc3Q8R310 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Tmcc3Q8R310 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.34■■□□□ 1.65
Tmcc3Q8R310 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tmcc3Q8R310 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Tmcc3Q8R310 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.63
Tmcc3Q8R310 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Tmcc3Q8R310 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
Tmcc3Q8R310 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Tmcc3Q8R310 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Tmcc3Q8R310 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Tmcc3Q8R310 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.13■■□□□ 1.61
Tmcc3Q8R310 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Tmcc3Q8R310 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Tmcc3Q8R310 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Tmcc3Q8R310 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Tmcc3Q8R310 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Tmcc3Q8R310 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25■■□□□ 1.59
Tmcc3Q8R310 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Tmcc3Q8R310 Gm25238-201ENSMUST00000174914 89 ntBASIC24.95■■□□□ 1.58
Tmcc3Q8R310 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tmcc3Q8R310 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Tmcc3Q8R310 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.93■■□□□ 1.58
Tmcc3Q8R310 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC24.88■■□□□ 1.57
Tmcc3Q8R310 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Tmcc3Q8R310 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Tmcc3Q8R310 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
Tmcc3Q8R310 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Tmcc3Q8R310 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tmcc3Q8R310 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tmcc3Q8R310 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Tmcc3Q8R310 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tmcc3Q8R310 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Tmcc3Q8R310 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms