RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 HTR1AP08908 422 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 GABRB1P18505 474 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 ITGA3P26006 1051 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 FBXW4P57775 412 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF141Q15928 474 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 CRTC2Q53ET0 693 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 JMJD6Q6NYC1 403 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 GDF7Q7Z4P5 450 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 CLEC1AQ8NC01 280 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 GNPDA2Q8TDQ7 276 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 UBE2FQ969M7 185 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 PAK1IP1Q9NWT1 392 aaPredicted RBP17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 IMPAD1Q9NX62 359 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 EXPH5Q8NEV8 1989 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 PTGES3LE9PB15 166 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 ICOSLGO75144 302 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 SOX3P41225 446 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 IDH2P48735 452 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 PNLIPRP2P54317 469 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 ATP12AP54707 1039 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 PDZK1Q5T2W1 519 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 SLX4IPQ5VYV7 408 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 RRM2BQ7LG56 351 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 SPACA3Q8IXA5 215 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 OR5M3Q8NGP4 307 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 YIPF3Q9GZM5 350 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF226Q9NYT6 803 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 POLHQ9Y253 713 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 SSUH2Q9Y2M2 353 aa17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 YARS2Q9Y2Z4 477 aaKnown RBP17.17■□□□□ 0.34
EXOSC3-201ENST00000327304 TRAPPC13A5PLN9 417 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 OR6C70A6NIJ9 312 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 H3BSA7 217 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 FAM20BO75063 409 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 FBXO45P0C2W1 286 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 EIF2S3P41091 472 aaKnown RBP17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 RRADP55042 308 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 HOXC5Q00444 222 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 PMS2P3Q13401 168 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 XAF1Q6GPH4 301 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF730Q6ZMV8 503 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 CMIPQ8IY22 773 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 SLC15A4Q8N697 577 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF614Q8N883 585 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 LHPPQ9H008 270 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 AASSQ9UDR5 926 aa17.16■□□□□ 0.34
EXOSC3-201ENST00000327304 CCDC160A6NGH7 325 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 THY1P04216 161 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 TP53P04637 393 aaPredicted RBP17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 GSSP48637 474 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 SSR4P51571 173 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 TSPAN31Q12999 210 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 FGFBP1Q14512 234 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 DEFB109BQ30KR1 87 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 ACER2Q5QJU3 275 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF540Q8NDQ6 660 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 PIGXQ8TBF5 258 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 TRUB1Q8WWH5 349 aaKnown RBP17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 SGCDQ92629 289 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 HGDQ93099 445 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 DCBLD2Q96PD2 775 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF559Q9BR84 538 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 UBQLN4Q9NRR5 601 aa17.15■□□□□ 0.34
EXOSC3-201ENST00000327304 MED19A0JLT2 244 aaPredicted RBP17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 H3BN98 237 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 ZNF701M0R085 212 aaPredicted RBP17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 NAGAP17050 411 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 POU1F1P28069 291 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 OMPP47874 163 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 TUBA3CQ13748 450 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 RAB39AQ14964 217 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 NEDD8Q15843 81 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 SMN1Q16637 294 aaKnown RBP17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 C12orf73Q69YU5 71 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 APOOLQ6UXV4 268 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 MBOAT2Q6ZWT7 520 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 PRICKLE2Q7Z3G6 844 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 NKAIN4Q8IVV8 208 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 ALDH16A1Q8IZ83 802 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 GALNT16Q8N428 558 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 SPACA9Q96E40 222 aaPredicted RBP17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 KRCC1Q9NPI7 259 aaPredicted RBP17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 RSL24D1Q9UHA3 163 aaKnown RBP17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 SLC7A7Q9UM01 511 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 NTNG1Q9Y2I2 539 aa17.14■□□□□ 0.34
EXOSC3-201ENST00000327304 DMXL2Q8TDJ6 3036 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 SH3D21A4FU49 640 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 A6NL46 340 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 BCAS1O75363 584 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 PRG2P13727 222 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 TBXA2RP21731 343 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 HTR2AP28223 471 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 LCN1P31025 176 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 TMED10P49755 219 aaKnown RBP17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 PLAURQ03405 335 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 EFR3AQ14156 821 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 OR1Q1Q15612 314 aa17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 ZNF791Q3KP31 576 aaPredicted RBP17.14■□□□□ 0.33
EXOSC3-201ENST00000327304 KLHL26Q53HC5 615 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms