RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Itgb6Q9Z0T9 787 aa10.27□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc37a4A0A1L1SUI3 450 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Glb1l3A2RSQ1 649 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Chrna10B2RX82 447 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Xkr6E9Q6C8 638 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dbx2F8VQH7 377 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Zfp934K7N6H3 473 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gstm6O35660 218 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 MgllO35678 303 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cox4i1P19783 169 aaKnown RBP10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ccl5P30882 91 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 MedagQ14BA6 303 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Elavl4Q61701 385 aaKnown RBP10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cd47Q61735 303 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ubtd2Q6PGH0 234 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rtn4rl1Q8K0S5 445 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 TapbplQ8VD31 451 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr821Q8VG45 310 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ptov1Q91VU8 416 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dcdc2cQ9D1B8 347 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Atg2bQ80XK6 2075 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 TrioQ0KL02 3102 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Igkv16-104A0A0B4J1I1 116 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Vmn1r77E9PY60 306 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Uba1yP31254 1058 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Trappc13Q3TIR1 417 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Nox3Q672J9 568 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr684Q7TRN8 312 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr503Q7TRU8 323 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Acot4Q8BWN8 421 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Q8C4P0 716 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr77Q8VEY9 312 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Prdm9Q96EQ9 843 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tada1Q99LM9 335 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ndufv2Q9D6J6 248 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc23a2Q9EPR4 648 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Chrm3Q9ERZ3 589 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm28897A0A087WP44 222 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Igkv12-46A0A140T8P6 115 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Skint8A7XV07 398 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Lrr1D3YY91 422 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm5799E9Q2M1 201 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 8030474K03RikE9Q4Y8 554 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm21876F6XK35 94 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 P01673 111 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 MatkP41242 505 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Qsox2Q3TMX7 692 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Spc25Q3UA16 226 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Pin1rt1Q3ULQ2 159 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Spag8Q3V0Q6 470 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 EgflamQ4VBE4 1017 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Diras2Q5PR73 199 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Chst9Q76EC5 413 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr871Q7TRF0 311 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Smyd4Q8BTK5 799 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 LaynQ8C351 381 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Lin28aQ8K3Y3 209 aaKnown RBP10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr868Q8VFI8 309 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Spred1Q924S8 444 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ripply3Q924S9 152 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Exosc1Q9DAA6 195 aaKnown RBP10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 AcoxlQ9DBS4 632 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Slc38a3Q9DCP2 505 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rcan2Q9JHG2 197 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Khdrbs2Q9WU01 349 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Sema4gQ9WUH7 837 aa10.26□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gm8050L7N2E3 205 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Efna3O08545 230 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Wsb2O54929 404 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Cd83O88324 196 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ccl4P14097 92 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Ripk1Q60855 656 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 B430306N03RikQ6QX36 289 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 PrlhrQ6VMN6 370 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Fam25cQ8CF02 89 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gpr1Q8K087 353 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gpr18Q8K1Z6 331 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr1387Q8VFA9 311 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Olfr986Q8VFN6 312 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Odf4Q8VI88 290 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Asb9Q91ZT8 290 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Uck2Q99PM9 261 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Mgme1Q9CXC3 338 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Senp8Q9D2Z4 221 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tnfrsf22Q9ER62 198 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Dmrtb1A2A9I7 359 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Msl3l2G3X992 371 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Arfip1G5E8V9 373 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 CtssO70370 340 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 OsmrO70458 971 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 ComtO88587 265 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tmco2P0C1V4 183 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Rln1P47932 185 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 AbatP61922 500 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Eef1a2P62631 463 aaKnown RBP10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Tlx2Q61663 284 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Phf21aQ6ZPK0 659 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Pced1bQ8BGX1 433 aaKnown RBP10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Gen1Q8BMI4 908 aa10.25□□□□□ -0.77
Msh3-201ENSMUST00000022220 Utp15Q8C7V3 528 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms