Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Gm25239-201ENSMUST00000174915 86 ntBASIC40.54■■■■■ 4.08
Igkv16-104A0A0B4J1I1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Igkv16-104A0A0B4J1I1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.01■■■■□ 3.52
Igkv16-104A0A0B4J1I1 Gm15042-201ENSMUST00000120212 883 ntBASIC35.28■■■■□ 3.24
Igkv16-104A0A0B4J1I1 Gm24109-201ENSMUST00000175489 103 ntBASIC35.21■■■■□ 3.23
Igkv16-104A0A0B4J1I1 Gm15045-201ENSMUST00000117359 883 ntBASIC34.48■■■■□ 3.11
Igkv16-104A0A0B4J1I1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Igkv16-104A0A0B4J1I1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.24■■■■□ 3.07
Igkv16-104A0A0B4J1I1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Igkv16-104A0A0B4J1I1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Igkv16-104A0A0B4J1I1 Gm23366-201ENSMUST00000175022 89 ntBASIC33.83■■■■□ 3.01
Igkv16-104A0A0B4J1I1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Igkv16-104A0A0B4J1I1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Igkv16-104A0A0B4J1I1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Igkv16-104A0A0B4J1I1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.87■■■□□ 2.85
Igkv16-104A0A0B4J1I1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.8■■■□□ 2.84
Igkv16-104A0A0B4J1I1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.62■■■□□ 2.81
Igkv16-104A0A0B4J1I1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.6■■■□□ 2.81
Igkv16-104A0A0B4J1I1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.54■■■□□ 2.8
Igkv16-104A0A0B4J1I1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Igkv16-104A0A0B4J1I1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
Igkv16-104A0A0B4J1I1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Igkv16-104A0A0B4J1I1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.24■■■□□ 2.75
Igkv16-104A0A0B4J1I1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Igkv16-104A0A0B4J1I1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Igkv16-104A0A0B4J1I1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Igkv16-104A0A0B4J1I1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Igkv16-104A0A0B4J1I1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.05■■■□□ 2.72
Igkv16-104A0A0B4J1I1 Gm25238-201ENSMUST00000174914 89 ntBASIC32.05■■■□□ 2.72
Igkv16-104A0A0B4J1I1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Igkv16-104A0A0B4J1I1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
Igkv16-104A0A0B4J1I1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
Igkv16-104A0A0B4J1I1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.65■■■□□ 2.66
Igkv16-104A0A0B4J1I1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Igkv16-104A0A0B4J1I1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
Igkv16-104A0A0B4J1I1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Igkv16-104A0A0B4J1I1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Igkv16-104A0A0B4J1I1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Igkv16-104A0A0B4J1I1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.17■■■□□ 2.58
Igkv16-104A0A0B4J1I1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Igkv16-104A0A0B4J1I1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
Igkv16-104A0A0B4J1I1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.05■■■□□ 2.56
Igkv16-104A0A0B4J1I1 Psd-208ENSMUST00000224556 2034 ntBASIC31.02■■■□□ 2.56
Igkv16-104A0A0B4J1I1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.97■■■□□ 2.55
Igkv16-104A0A0B4J1I1 Gm27325-201ENSMUST00000175467 74 ntBASIC30.89■■■□□ 2.54
Igkv16-104A0A0B4J1I1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.8■■■□□ 2.52
Igkv16-104A0A0B4J1I1 Gm25262-201ENSMUST00000174934 133 ntBASIC30.77■■■□□ 2.52
Igkv16-104A0A0B4J1I1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Igkv16-104A0A0B4J1I1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
Igkv16-104A0A0B4J1I1 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Igkv16-104A0A0B4J1I1 Rab21-202ENSMUST00000218831 843 ntBASIC30.44■■■□□ 2.46
Igkv16-104A0A0B4J1I1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.41■■■□□ 2.46
Igkv16-104A0A0B4J1I1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Igkv16-104A0A0B4J1I1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Igkv16-104A0A0B4J1I1 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.35■■■□□ 2.45
Igkv16-104A0A0B4J1I1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.33■■■□□ 2.45
Igkv16-104A0A0B4J1I1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.33■■■□□ 2.45
Igkv16-104A0A0B4J1I1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Igkv16-104A0A0B4J1I1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Igkv16-104A0A0B4J1I1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.19■■■□□ 2.42
Igkv16-104A0A0B4J1I1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.18■■■□□ 2.42
Igkv16-104A0A0B4J1I1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
Igkv16-104A0A0B4J1I1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Igkv16-104A0A0B4J1I1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Igkv16-104A0A0B4J1I1 Gm26115-201ENSMUST00000175605 87 ntBASIC30.06■■■□□ 2.4
Igkv16-104A0A0B4J1I1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Igkv16-104A0A0B4J1I1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Igkv16-104A0A0B4J1I1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.03■■■□□ 2.4
Igkv16-104A0A0B4J1I1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.95■■■□□ 2.38
Igkv16-104A0A0B4J1I1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.94■■■□□ 2.38
Igkv16-104A0A0B4J1I1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Igkv16-104A0A0B4J1I1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Igkv16-104A0A0B4J1I1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Igkv16-104A0A0B4J1I1 Gm8109-201ENSMUST00000194076 746 ntBASIC29.88■■■□□ 2.37
Igkv16-104A0A0B4J1I1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Igkv16-104A0A0B4J1I1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Igkv16-104A0A0B4J1I1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Igkv16-104A0A0B4J1I1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Igkv16-104A0A0B4J1I1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Igkv16-104A0A0B4J1I1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.77■■■□□ 2.36
Igkv16-104A0A0B4J1I1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.71■■■□□ 2.35
Igkv16-104A0A0B4J1I1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Igkv16-104A0A0B4J1I1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Igkv16-104A0A0B4J1I1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.66■■■□□ 2.34
Igkv16-104A0A0B4J1I1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Igkv16-104A0A0B4J1I1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.56■■■□□ 2.32
Igkv16-104A0A0B4J1I1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Igkv16-104A0A0B4J1I1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Igkv16-104A0A0B4J1I1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Igkv16-104A0A0B4J1I1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Igkv16-104A0A0B4J1I1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Igkv16-104A0A0B4J1I1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.41■■■□□ 2.3
Igkv16-104A0A0B4J1I1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
Igkv16-104A0A0B4J1I1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Igkv16-104A0A0B4J1I1 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.37■■■□□ 2.29
Igkv16-104A0A0B4J1I1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.36■■■□□ 2.29
Igkv16-104A0A0B4J1I1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Igkv16-104A0A0B4J1I1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
Igkv16-104A0A0B4J1I1 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.32■■■□□ 2.28
Igkv16-104A0A0B4J1I1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms