Protein–RNA interactions for Protein: Q6QX36

B430306N03Rik, CRKD-binding protein, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B430306N03RikQ6QX36 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29,3■■■□□ 2,28
B430306N03RikQ6QX36 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28,6■■■□□ 2,17
B430306N03RikQ6QX36 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28,15■■■□□ 2,1
B430306N03RikQ6QX36 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28,06■■■□□ 2,08
B430306N03RikQ6QX36 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27,85■■■□□ 2,05
B430306N03RikQ6QX36 Psd-208ENSMUST00000224556 2034 ntBASIC27,78■■■□□ 2,04
B430306N03RikQ6QX36 Gm25239-201ENSMUST00000174915 86 ntBASIC27,05■■□□□ 1,92
B430306N03RikQ6QX36 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26,46■■□□□ 1,83
B430306N03RikQ6QX36 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
B430306N03RikQ6QX36 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
B430306N03RikQ6QX36 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26,38■■□□□ 1,81
B430306N03RikQ6QX36 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26,27■■□□□ 1,8
B430306N03RikQ6QX36 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26,25■■□□□ 1,79
B430306N03RikQ6QX36 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26,16■■□□□ 1,78
B430306N03RikQ6QX36 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
B430306N03RikQ6QX36 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26,04■■□□□ 1,76
B430306N03RikQ6QX36 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25,98■■□□□ 1,75
B430306N03RikQ6QX36 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25,9■■□□□ 1,74
B430306N03RikQ6QX36 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25,67■■□□□ 1,7
B430306N03RikQ6QX36 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25,65■■□□□ 1,7
B430306N03RikQ6QX36 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25,58■■□□□ 1,69
B430306N03RikQ6QX36 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25,56■■□□□ 1,68
B430306N03RikQ6QX36 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25,5■■□□□ 1,67
B430306N03RikQ6QX36 Gm42596-201ENSMUST00000196305 1958 ntBASIC25,4■■□□□ 1,66
B430306N03RikQ6QX36 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25,26■■□□□ 1,63
B430306N03RikQ6QX36 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25,21■■□□□ 1,63
B430306N03RikQ6QX36 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25,18■■□□□ 1,62
B430306N03RikQ6QX36 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25,11■■□□□ 1,61
B430306N03RikQ6QX36 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25,08■■□□□ 1,6
B430306N03RikQ6QX36 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25■■□□□ 1,59
B430306N03RikQ6QX36 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24,98■■□□□ 1,59
B430306N03RikQ6QX36 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24,94■■□□□ 1,58
B430306N03RikQ6QX36 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24,92■■□□□ 1,58
B430306N03RikQ6QX36 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24,87■■□□□ 1,57
B430306N03RikQ6QX36 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24,87■■□□□ 1,57
B430306N03RikQ6QX36 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24,69■■□□□ 1,54
B430306N03RikQ6QX36 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24,67■■□□□ 1,54
B430306N03RikQ6QX36 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24,67■■□□□ 1,54
B430306N03RikQ6QX36 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
B430306N03RikQ6QX36 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24,48■■□□□ 1,51
B430306N03RikQ6QX36 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24,47■■□□□ 1,51
B430306N03RikQ6QX36 Gm10524-201ENSMUST00000181931 1893 ntBASIC24,45■■□□□ 1,5
B430306N03RikQ6QX36 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24,4■■□□□ 1,5
B430306N03RikQ6QX36 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24,33■■□□□ 1,49
B430306N03RikQ6QX36 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24,32■■□□□ 1,48
B430306N03RikQ6QX36 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24,32■■□□□ 1,48
B430306N03RikQ6QX36 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24,3■■□□□ 1,48
B430306N03RikQ6QX36 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24,28■■□□□ 1,48
B430306N03RikQ6QX36 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24,25■■□□□ 1,47
B430306N03RikQ6QX36 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24,21■■□□□ 1,47
B430306N03RikQ6QX36 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24,19■■□□□ 1,46
B430306N03RikQ6QX36 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24,13■■□□□ 1,45
B430306N03RikQ6QX36 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24,1■■□□□ 1,45
B430306N03RikQ6QX36 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24,08■■□□□ 1,45
B430306N03RikQ6QX36 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24,05■■□□□ 1,44
B430306N03RikQ6QX36 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24,04■■□□□ 1,44
B430306N03RikQ6QX36 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24,04■■□□□ 1,44
B430306N03RikQ6QX36 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24,03■■□□□ 1,44
B430306N03RikQ6QX36 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23,95■■□□□ 1,42
B430306N03RikQ6QX36 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23,94■■□□□ 1,42
B430306N03RikQ6QX36 Gm15042-201ENSMUST00000120212 883 ntBASIC23,93■■□□□ 1,42
B430306N03RikQ6QX36 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23,92■■□□□ 1,42
B430306N03RikQ6QX36 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23,91■■□□□ 1,42
B430306N03RikQ6QX36 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23,85■■□□□ 1,41
B430306N03RikQ6QX36 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23,85■■□□□ 1,41
B430306N03RikQ6QX36 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23,83■■□□□ 1,41
B430306N03RikQ6QX36 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23,8■■□□□ 1,4
B430306N03RikQ6QX36 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23,79■■□□□ 1,4
B430306N03RikQ6QX36 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23,79■■□□□ 1,4
B430306N03RikQ6QX36 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23,78■■□□□ 1,4
B430306N03RikQ6QX36 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23,74■■□□□ 1,39
B430306N03RikQ6QX36 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23,72■■□□□ 1,39
B430306N03RikQ6QX36 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23,71■■□□□ 1,39
B430306N03RikQ6QX36 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23,68■■□□□ 1,38
B430306N03RikQ6QX36 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23,68■■□□□ 1,38
B430306N03RikQ6QX36 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23,66■■□□□ 1,38
B430306N03RikQ6QX36 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23,64■■□□□ 1,38
B430306N03RikQ6QX36 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23,63■■□□□ 1,37
B430306N03RikQ6QX36 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
B430306N03RikQ6QX36 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23,57■■□□□ 1,36
B430306N03RikQ6QX36 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23,54■■□□□ 1,36
B430306N03RikQ6QX36 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23,5■■□□□ 1,35
B430306N03RikQ6QX36 Zxda-201ENSMUST00000117281 2621 ntBASIC23,49■■□□□ 1,35
B430306N03RikQ6QX36 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23,49■■□□□ 1,35
B430306N03RikQ6QX36 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23,47■■□□□ 1,35
B430306N03RikQ6QX36 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23,46■■□□□ 1,35
B430306N03RikQ6QX36 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23,46■■□□□ 1,35
B430306N03RikQ6QX36 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23,39■■□□□ 1,34
B430306N03RikQ6QX36 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23,38■■□□□ 1,33
B430306N03RikQ6QX36 Gm15045-201ENSMUST00000117359 883 ntBASIC23,38■■□□□ 1,33
B430306N03RikQ6QX36 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
B430306N03RikQ6QX36 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23,36■■□□□ 1,33
B430306N03RikQ6QX36 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23,34■■□□□ 1,33
B430306N03RikQ6QX36 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23,33■■□□□ 1,32
B430306N03RikQ6QX36 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23,32■■□□□ 1,32
B430306N03RikQ6QX36 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
B430306N03RikQ6QX36 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23,31■■□□□ 1,32
B430306N03RikQ6QX36 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23,31■■□□□ 1,32
B430306N03RikQ6QX36 Gm24109-201ENSMUST00000175489 103 ntBASIC23,28■■□□□ 1,32
B430306N03RikQ6QX36 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23,25■■□□□ 1,31
Retrieved 100 of 76,532 protein–RNA pairs in 42,5 ms