Protein–RNA interactions for Protein: Q6QX36

B430306N03Rik, CRKD-binding protein, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B430306N03RikQ6QX36 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
B430306N03RikQ6QX36 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
B430306N03RikQ6QX36 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
B430306N03RikQ6QX36 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
B430306N03RikQ6QX36 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
B430306N03RikQ6QX36 Psd-208ENSMUST00000224556 2034 ntBASIC27.78■■■□□ 2.04
B430306N03RikQ6QX36 Gm25239-201ENSMUST00000174915 86 ntBASIC27.05■■□□□ 1.92
B430306N03RikQ6QX36 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
B430306N03RikQ6QX36 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
B430306N03RikQ6QX36 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
B430306N03RikQ6QX36 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
B430306N03RikQ6QX36 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
B430306N03RikQ6QX36 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
B430306N03RikQ6QX36 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
B430306N03RikQ6QX36 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
B430306N03RikQ6QX36 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
B430306N03RikQ6QX36 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
B430306N03RikQ6QX36 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
B430306N03RikQ6QX36 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
B430306N03RikQ6QX36 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
B430306N03RikQ6QX36 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
B430306N03RikQ6QX36 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
B430306N03RikQ6QX36 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
B430306N03RikQ6QX36 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.4■■□□□ 1.66
B430306N03RikQ6QX36 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.26■■□□□ 1.63
B430306N03RikQ6QX36 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
B430306N03RikQ6QX36 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
B430306N03RikQ6QX36 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
B430306N03RikQ6QX36 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
B430306N03RikQ6QX36 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25■■□□□ 1.59
B430306N03RikQ6QX36 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
B430306N03RikQ6QX36 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
B430306N03RikQ6QX36 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.92■■□□□ 1.58
B430306N03RikQ6QX36 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.87■■□□□ 1.57
B430306N03RikQ6QX36 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
B430306N03RikQ6QX36 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
B430306N03RikQ6QX36 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
B430306N03RikQ6QX36 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
B430306N03RikQ6QX36 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
B430306N03RikQ6QX36 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
B430306N03RikQ6QX36 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
B430306N03RikQ6QX36 Gm10524-201ENSMUST00000181931 1893 ntBASIC24.45■■□□□ 1.5
B430306N03RikQ6QX36 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
B430306N03RikQ6QX36 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
B430306N03RikQ6QX36 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.32■■□□□ 1.48
B430306N03RikQ6QX36 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
B430306N03RikQ6QX36 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
B430306N03RikQ6QX36 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
B430306N03RikQ6QX36 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
B430306N03RikQ6QX36 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
B430306N03RikQ6QX36 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
B430306N03RikQ6QX36 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
B430306N03RikQ6QX36 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.1■■□□□ 1.45
B430306N03RikQ6QX36 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.08■■□□□ 1.45
B430306N03RikQ6QX36 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
B430306N03RikQ6QX36 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.04■■□□□ 1.44
B430306N03RikQ6QX36 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
B430306N03RikQ6QX36 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
B430306N03RikQ6QX36 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
B430306N03RikQ6QX36 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.94■■□□□ 1.42
B430306N03RikQ6QX36 Gm15042-201ENSMUST00000120212 883 ntBASIC23.93■■□□□ 1.42
B430306N03RikQ6QX36 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.92■■□□□ 1.42
B430306N03RikQ6QX36 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
B430306N03RikQ6QX36 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
B430306N03RikQ6QX36 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
B430306N03RikQ6QX36 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
B430306N03RikQ6QX36 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
B430306N03RikQ6QX36 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
B430306N03RikQ6QX36 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
B430306N03RikQ6QX36 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
B430306N03RikQ6QX36 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
B430306N03RikQ6QX36 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
B430306N03RikQ6QX36 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
B430306N03RikQ6QX36 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
B430306N03RikQ6QX36 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
B430306N03RikQ6QX36 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.66■■□□□ 1.38
B430306N03RikQ6QX36 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
B430306N03RikQ6QX36 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
B430306N03RikQ6QX36 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
B430306N03RikQ6QX36 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
B430306N03RikQ6QX36 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
B430306N03RikQ6QX36 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
B430306N03RikQ6QX36 Zxda-201ENSMUST00000117281 2621 ntBASIC23.49■■□□□ 1.35
B430306N03RikQ6QX36 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
B430306N03RikQ6QX36 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
B430306N03RikQ6QX36 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
B430306N03RikQ6QX36 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
B430306N03RikQ6QX36 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
B430306N03RikQ6QX36 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.38■■□□□ 1.33
B430306N03RikQ6QX36 Gm15045-201ENSMUST00000117359 883 ntBASIC23.38■■□□□ 1.33
B430306N03RikQ6QX36 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
B430306N03RikQ6QX36 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
B430306N03RikQ6QX36 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
B430306N03RikQ6QX36 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.33■■□□□ 1.32
B430306N03RikQ6QX36 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
B430306N03RikQ6QX36 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
B430306N03RikQ6QX36 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.31■■□□□ 1.32
B430306N03RikQ6QX36 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
B430306N03RikQ6QX36 Gm24109-201ENSMUST00000175489 103 ntBASIC23.28■■□□□ 1.32
B430306N03RikQ6QX36 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms