Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Gm25239-201ENSMUST00000174915 86 ntBASIC40.64■■■■■ 4.1
Rtn4rl1Q8K0S5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
Rtn4rl1Q8K0S5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
Rtn4rl1Q8K0S5 Gm24109-201ENSMUST00000175489 103 ntBASIC35.34■■■■□ 3.25
Rtn4rl1Q8K0S5 Gm15042-201ENSMUST00000120212 883 ntBASIC35.24■■■■□ 3.23
Rtn4rl1Q8K0S5 Gm15045-201ENSMUST00000117359 883 ntBASIC34.47■■■■□ 3.11
Rtn4rl1Q8K0S5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Rtn4rl1Q8K0S5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Rtn4rl1Q8K0S5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Rtn4rl1Q8K0S5 Gm23366-201ENSMUST00000175022 89 ntBASIC33.88■■■■□ 3.01
Rtn4rl1Q8K0S5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Rtn4rl1Q8K0S5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.63■■■□□ 2.97
Rtn4rl1Q8K0S5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Rtn4rl1Q8K0S5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.06■■■□□ 2.88
Rtn4rl1Q8K0S5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Rtn4rl1Q8K0S5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.77■■■□□ 2.84
Rtn4rl1Q8K0S5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.67■■■□□ 2.82
Rtn4rl1Q8K0S5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Rtn4rl1Q8K0S5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.6■■■□□ 2.81
Rtn4rl1Q8K0S5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Rtn4rl1Q8K0S5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Rtn4rl1Q8K0S5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Rtn4rl1Q8K0S5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rtn4rl1Q8K0S5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Rtn4rl1Q8K0S5 Gm25238-201ENSMUST00000174914 89 ntBASIC32.2■■■□□ 2.75
Rtn4rl1Q8K0S5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.13■■■□□ 2.73
Rtn4rl1Q8K0S5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.13■■■□□ 2.73
Rtn4rl1Q8K0S5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Rtn4rl1Q8K0S5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
Rtn4rl1Q8K0S5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Rtn4rl1Q8K0S5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
Rtn4rl1Q8K0S5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rtn4rl1Q8K0S5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.53■■■□□ 2.64
Rtn4rl1Q8K0S5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
Rtn4rl1Q8K0S5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rtn4rl1Q8K0S5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Rtn4rl1Q8K0S5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rtn4rl1Q8K0S5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.2■■■□□ 2.59
Rtn4rl1Q8K0S5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
Rtn4rl1Q8K0S5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rtn4rl1Q8K0S5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.1■■■□□ 2.57
Rtn4rl1Q8K0S5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rtn4rl1Q8K0S5 Gm25262-201ENSMUST00000174934 133 ntBASIC30.9■■■□□ 2.54
Rtn4rl1Q8K0S5 Gm27325-201ENSMUST00000175467 74 ntBASIC30.89■■■□□ 2.54
Rtn4rl1Q8K0S5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.85■■■□□ 2.53
Rtn4rl1Q8K0S5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.83■■■□□ 2.53
Rtn4rl1Q8K0S5 Psd-208ENSMUST00000224556 2034 ntBASIC30.81■■■□□ 2.52
Rtn4rl1Q8K0S5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Rtn4rl1Q8K0S5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Rtn4rl1Q8K0S5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
Rtn4rl1Q8K0S5 Rab21-202ENSMUST00000218831 843 ntBASIC30.44■■■□□ 2.46
Rtn4rl1Q8K0S5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.43■■■□□ 2.46
Rtn4rl1Q8K0S5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
Rtn4rl1Q8K0S5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.39■■■□□ 2.46
Rtn4rl1Q8K0S5 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
Rtn4rl1Q8K0S5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.31■■■□□ 2.44
Rtn4rl1Q8K0S5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.27■■■□□ 2.44
Rtn4rl1Q8K0S5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Rtn4rl1Q8K0S5 Gm26115-201ENSMUST00000175605 87 ntBASIC30.23■■■□□ 2.43
Rtn4rl1Q8K0S5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.22■■■□□ 2.43
Rtn4rl1Q8K0S5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
Rtn4rl1Q8K0S5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Rtn4rl1Q8K0S5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Rtn4rl1Q8K0S5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.11■■■□□ 2.41
Rtn4rl1Q8K0S5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Rtn4rl1Q8K0S5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.1■■■□□ 2.41
Rtn4rl1Q8K0S5 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Rtn4rl1Q8K0S5 Gm8109-201ENSMUST00000194076 746 ntBASIC30.05■■■□□ 2.4
Rtn4rl1Q8K0S5 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Rtn4rl1Q8K0S5 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.99■■■□□ 2.39
Rtn4rl1Q8K0S5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
Rtn4rl1Q8K0S5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Rtn4rl1Q8K0S5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.91■■■□□ 2.38
Rtn4rl1Q8K0S5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.88■■■□□ 2.37
Rtn4rl1Q8K0S5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Rtn4rl1Q8K0S5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
Rtn4rl1Q8K0S5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rtn4rl1Q8K0S5 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.78■■■□□ 2.36
Rtn4rl1Q8K0S5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Rtn4rl1Q8K0S5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Rtn4rl1Q8K0S5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Rtn4rl1Q8K0S5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rtn4rl1Q8K0S5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Rtn4rl1Q8K0S5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Rtn4rl1Q8K0S5 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
Rtn4rl1Q8K0S5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rtn4rl1Q8K0S5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.53■■■□□ 2.32
Rtn4rl1Q8K0S5 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rtn4rl1Q8K0S5 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.41■■■□□ 2.3
Rtn4rl1Q8K0S5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.37■■■□□ 2.29
Rtn4rl1Q8K0S5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rtn4rl1Q8K0S5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rtn4rl1Q8K0S5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.36■■■□□ 2.29
Rtn4rl1Q8K0S5 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.34■■■□□ 2.29
Rtn4rl1Q8K0S5 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
Rtn4rl1Q8K0S5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Rtn4rl1Q8K0S5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Rtn4rl1Q8K0S5 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Rtn4rl1Q8K0S5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.23■■■□□ 2.27
Rtn4rl1Q8K0S5 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms