RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 FKH2P41813 862 aa-0.53□□□□□ -2.49
snR40snR40 ROK1P45818 564 aaPredicted RBP-0.53□□□□□ -2.49
snR40snR40 IRC3Q06683 689 aa-0.53□□□□□ -2.49
snR40snR40 PRS5Q12265 496 aaKnown RBP-0.53□□□□□ -2.49
snR40snR40 BAS1P22035 811 aa-0.54□□□□□ -2.5
snR40snR40 PKC1P24583 1151 aa-0.54□□□□□ -2.5
snR40snR40 SAT4P25333 603 aaKnown RBP-0.54□□□□□ -2.5
snR40snR40 YMC1P32331 307 aa-0.54□□□□□ -2.5
snR40snR40 RDH54P38086 958 aa-0.54□□□□□ -2.5
snR40snR40 MAM1P40065 302 aa-0.54□□□□□ -2.5
snR40snR40 ARG2P40360 574 aa-0.54□□□□□ -2.5
snR40snR40 CTR1P49573 406 aa-0.54□□□□□ -2.5
snR40snR40 AMA1P50082 593 aa-0.54□□□□□ -2.5
snR40snR40 PUN1Q06991 263 aa-0.54□□□□□ -2.5
snR40snR40 HER1Q12276 1246 aa-0.54□□□□□ -2.5
snR40snR40 UGP1P32861 499 aaKnown RBP-0.55□□□□□ -2.5
snR40snR40 UGA2P38067 497 aa-0.55□□□□□ -2.5
snR40snR40 BRL1P38770 471 aa-0.55□□□□□ -2.5
snR40snR40 NMD5P46970 1048 aa-0.55□□□□□ -2.5
snR40snR40 HOS2P53096 452 aaPredicted RBP-0.55□□□□□ -2.5
snR40snR40 MON1P53129 644 aa-0.55□□□□□ -2.5
snR40snR40 SAS10Q12136 610 aaPredicted RBP-0.55□□□□□ -2.5
snR40snR40 YDL012CQ12489 107 aa-0.55□□□□□ -2.5
snR40snR40 BI3Q9ZZW7 517 aa-0.55□□□□□ -2.5
snR40snR40 YER152CP10356 443 aa-0.56□□□□□ -2.5
snR40snR40 LOT5P34234 306 aa-0.56□□□□□ -2.5
snR40snR40 SWH1P35845 1188 aa-0.56□□□□□ -2.5
snR40snR40 GGA2P38817 585 aaKnown RBP-0.56□□□□□ -2.5
snR40snR40 YAP1802P53309 568 aa-0.56□□□□□ -2.5
snR40snR40 MRPL1Q04599 285 aa-0.56□□□□□ -2.5
snR40snR40 IZH3Q07959 543 aa-0.56□□□□□ -2.5
snR40snR40 TUP1P16649 713 aa-0.57□□□□□ -2.5
snR40snR40 HXT1P32465 570 aa-0.57□□□□□ -2.5
snR40snR40 HIS7P33734 552 aaKnown RBP-0.57□□□□□ -2.5
snR40snR40 SNO3P43544 222 aa-0.57□□□□□ -2.5
snR40snR40 LYS20P48570 428 aaKnown RBP-0.57□□□□□ -2.5
snR40snR40 HSV2P50079 448 aaPredicted RBP-0.57□□□□□ -2.5
snR40snR40 MTC3P53077 123 aa-0.57□□□□□ -2.5
snR40snR40 CWC24P53769 259 aa-0.57□□□□□ -2.5
snR40snR40 PEX13P80667 386 aa-0.57□□□□□ -2.5
snR40snR40 RSC9Q03124 581 aa-0.57□□□□□ -2.5
snR40snR40 TLG2Q08144 397 aa-0.57□□□□□ -2.5
snR40snR40 OSW2Q12202 724 aa-0.57□□□□□ -2.5
snR40snR40 ECM21P38167 1117 aaKnown RBP-0.58□□□□□ -2.5
snR40snR40 GUA1P38625 525 aaKnown RBP-0.58□□□□□ -2.5
snR40snR40 BCD1P38772 366 aa-0.58□□□□□ -2.5
snR40snR40 PIP2P52960 996 aa-0.58□□□□□ -2.5
snR40snR40 ATP23P53722 227 aa-0.58□□□□□ -2.5
snR40snR40 RNY1Q02933 434 aaKnown RBP-0.58□□□□□ -2.5
snR40snR40 ULA1Q12059 462 aa-0.58□□□□□ -2.5
snR40snR40 LSO1Q3E827 93 aa-0.58□□□□□ -2.5
snR40snR40 AI5_ALPHAQ9ZZX1 630 aa-0.58□□□□□ -2.5
snR40snR40 YPT1P01123 206 aaKnown RBP-0.59□□□□□ -2.5
snR40snR40 YCP4P25349 247 aaKnown RBP-0.59□□□□□ -2.5
snR40snR40 YCR043CP25361 127 aa-0.59□□□□□ -2.5
snR40snR40 CCR4P31384 837 aaKnown RBP-0.59□□□□□ -2.5
snR40snR40 HIR1P32479 840 aa-0.59□□□□□ -2.5
snR40snR40 RTG2P32608 588 aaKnown RBP-0.59□□□□□ -2.5
snR40snR40 UBX7P38349 436 aa-0.59□□□□□ -2.5
snR40snR40 RPP1P38786 293 aa-0.59□□□□□ -2.5
snR40snR40 YMR124WP39523 943 aaKnown RBP-0.59□□□□□ -2.5
snR40snR40 TRS120Q04183 1289 aa-0.59□□□□□ -2.5
snR40snR40 PUF6Q04373 656 aaKnown RBP-0.59□□□□□ -2.5
snR40snR40 ASM4Q05166 528 aa-0.59□□□□□ -2.5
snR40snR40 EST2Q06163 884 aa-0.59□□□□□ -2.5
snR40snR40 MPH2P0CD99 609 aa-0.6□□□□□ -2.51
snR40snR40 YER190C-BP0CX94 160 aa-0.6□□□□□ -2.51
snR40snR40 YEL077W-AP0CX95 160 aa-0.6□□□□□ -2.51
snR40snR40 YGR296C-BP0CX96 160 aa-0.6□□□□□ -2.51
snR40snR40 YPL283W-BP0CX97 160 aa-0.6□□□□□ -2.51
snR40snR40 YPR204C-AP0CX98 160 aa-0.6□□□□□ -2.51
snR40snR40 HEM13P11353 328 aaKnown RBP-0.6□□□□□ -2.51
snR40snR40 GEM1P39722 662 aa-0.6□□□□□ -2.51
snR40snR40 YIR042CP40586 236 aa-0.6□□□□□ -2.51
snR40snR40 TES1P41903 349 aaKnown RBP-0.6□□□□□ -2.51
snR40snR40 UBC11P52492 156 aa-0.6□□□□□ -2.51
snR40snR40 ECM23Q02710 187 aa-0.6□□□□□ -2.51
snR40snR40 BSC2Q05611 235 aa-0.6□□□□□ -2.51
snR40snR40 CRC1Q12289 327 aa-0.6□□□□□ -2.51
snR40snR40 THS1P04801 734 aaKnown RBP-0.61□□□□□ -2.51
snR40snR40 SIR3P06701 978 aa-0.61□□□□□ -2.51
snR40snR40 YEL076C-AP0CX16 216 aa-0.61□□□□□ -2.51
snR40snR40 YLR464WP0CX17 216 aa-0.61□□□□□ -2.51
snR40snR40 PYC1P11154 1178 aaKnown RBP-0.61□□□□□ -2.51
snR40snR40 YAP1P19880 650 aaKnown RBP-0.61□□□□□ -2.51
snR40snR40 SLA2P33338 968 aa-0.61□□□□□ -2.51
snR40snR40 YEL076CP39971 216 aa-0.61□□□□□ -2.51
snR40snR40 GSM1P42950 618 aa-0.61□□□□□ -2.51
snR40snR40 STP4Q07351 490 aa-0.61□□□□□ -2.51
snR40snR40 ACM1Q08981 209 aa-0.61□□□□□ -2.51
snR40snR40 LAT1P12695 482 aaKnown RBP-0.62□□□□□ -2.51
snR40snR40 PPZ1P26570 692 aa-0.62□□□□□ -2.51
snR40snR40 RGD1P38339 666 aa-0.62□□□□□ -2.51
snR40snR40 PMC1P38929 1173 aaPredicted RBP-0.62□□□□□ -2.51
snR40snR40 YIL152WP40455 235 aa-0.62□□□□□ -2.51
snR40snR40 ATG4P53867 494 aa-0.62□□□□□ -2.51
snR40snR40 ENT2Q05785 613 aa-0.62□□□□□ -2.51
snR40snR40 INP54Q08227 384 aaKnown RBP-0.62□□□□□ -2.51
snR40snR40 SOD1P00445 154 aaKnown RBP-0.63□□□□□ -2.51
snR40snR40 TIF1P10081 395 aaKnown RBP-0.63□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 123.6 ms