RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR38, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR38	snR38	PCI8	P40512	444 aa		0.58	□□□□□ -2.32
snR38	snR38	FKH2	P41813	862 aa		0.58	□□□□□ -2.32
snR38	snR38	YGR053C	P53234	283 aa		0.58	□□□□□ -2.32
snR38	snR38	SLU7	Q02775	382 aa	Known RBP	0.58	□□□□□ -2.32
snR38	snR38	ADI1	Q03677	179 aa		0.58	□□□□□ -2.32
snR38	snR38	ENT2	Q05785	613 aa		0.58	□□□□□ -2.32
snR38	snR38	GNT1	Q12096	491 aa		0.58	□□□□□ -2.32
snR38	snR38	MNL2	Q12205	849 aa		0.58	□□□□□ -2.32
snR38	snR38	LEU3	P08638	886 aa		0.57	□□□□□ -2.32
snR38	snR38	HEM13	P11353	328 aa	Known RBP	0.57	□□□□□ -2.32
snR38	snR38	TSR4	P25040	408 aa		0.57	□□□□□ -2.32
snR38	snR38	SEC21	P32074	935 aa	Known RBP	0.57	□□□□□ -2.32
snR38	snR38	MKK2	P32491	506 aa		0.57	□□□□□ -2.32
snR38	snR38	ASK1	P35734	292 aa		0.57	□□□□□ -2.32
snR38	snR38	EXO84	P38261	753 aa		0.57	□□□□□ -2.32
snR38	snR38	RPP1	P38786	293 aa		0.57	□□□□□ -2.32
snR38	snR38	CCT5	P40413	562 aa	Known RBP	0.57	□□□□□ -2.32
snR38	snR38	YIR042C	P40586	236 aa		0.57	□□□□□ -2.32
snR38	snR38	MTC3	P53077	123 aa		0.57	□□□□□ -2.32
snR38	snR38	FCP1	Q03254	732 aa		0.57	□□□□□ -2.32
snR38	snR38	ADE5,7	P07244	802 aa	Known RBP	0.56	□□□□□ -2.32
snR38	snR38	DBP5	P20449	482 aa	Known RBP	0.56	□□□□□ -2.32
snR38	snR38	NGG1	P32494	702 aa		0.56	□□□□□ -2.32
snR38	snR38	GCD6	P32501	712 aa	Known RBP	0.56	□□□□□ -2.32
snR38	snR38	REV7	P38927	245 aa		0.56	□□□□□ -2.32
snR38	snR38	JHD1	P40034	492 aa		0.56	□□□□□ -2.32
snR38	snR38	MNT3	P40549	630 aa		0.56	□□□□□ -2.32
snR38	snR38	RAI1	P53063	387 aa	Known RBP	0.56	□□□□□ -2.32
snR38	snR38	ATG1	P53104	897 aa		0.56	□□□□□ -2.32
snR38	snR38	SIW14	P53965	281 aa		0.56	□□□□□ -2.32
snR38	snR38	VPS30	Q02948	557 aa		0.56	□□□□□ -2.32
snR38	snR38	SRT1	Q03175	343 aa		0.56	□□□□□ -2.32
snR38	snR38	KAR5	Q04746	504 aa		0.56	□□□□□ -2.32
snR38	snR38	DAL4	Q04895	635 aa		0.56	□□□□□ -2.32
snR38	snR38	SPP382	Q06411	708 aa	Predicted RBP	0.56	□□□□□ -2.32
snR38	snR38	IRC13	Q08630	104 aa		0.56	□□□□□ -2.32
snR38	snR38	MBR1	P23493	339 aa		0.55	□□□□□ -2.32
snR38	snR38	ECM32	P32644	1121 aa	Known RBP	0.55	□□□□□ -2.32
snR38	snR38	UGA4	P32837	571 aa		0.55	□□□□□ -2.32
snR38	snR38	ATG36	P46983	293 aa		0.55	□□□□□ -2.32
snR38	snR38	APJ1	P53940	528 aa		0.55	□□□□□ -2.32
snR38	snR38	ERG13	P54839	491 aa	Known RBP	0.55	□□□□□ -2.32
snR38	snR38	ROD1	Q02805	837 aa		0.55	□□□□□ -2.32
snR38	snR38	MDM38	Q08179	573 aa		0.55	□□□□□ -2.32
snR38	snR38	BUD7	Q08754	746 aa		0.55	□□□□□ -2.32
snR38	snR38	OXR1	Q08952	273 aa		0.55	□□□□□ -2.32
snR38	snR38	MLH3	Q12083	715 aa		0.55	□□□□□ -2.32
snR38	snR38	LAT1	P12695	482 aa	Known RBP	0.54	□□□□□ -2.32
snR38	snR38	MCM7	P38132	845 aa		0.54	□□□□□ -2.32
snR38	snR38	YIL169C	P40442	995 aa		0.54	□□□□□ -2.32
snR38	snR38	MPH1	P40562	993 aa		0.54	□□□□□ -2.32
snR38	snR38	TAX4	P47030	604 aa		0.54	□□□□□ -2.32
snR38	snR38	YGL260W	P53056	76 aa		0.54	□□□□□ -2.32
snR38	snR38	GRS2	Q06817	618 aa		0.54	□□□□□ -2.32
snR38	snR38	PHR1	P05066	565 aa	Known RBP RIP-Chip data	0.53	□□□□□ -2.32	not detected
snR38	snR38	PYC1	P11154	1178 aa	Known RBP	0.53	□□□□□ -2.32
snR38	snR38	SAT4	P25333	603 aa	Known RBP	0.53	□□□□□ -2.32
snR38	snR38	UGP1	P32861	499 aa	Known RBP	0.53	□□□□□ -2.32
snR38	snR38	VPS35	P34110	944 aa		0.53	□□□□□ -2.32
snR38	snR38	HOT13	P36078	116 aa		0.53	□□□□□ -2.32
snR38	snR38	PNT1	P38969	423 aa		0.53	□□□□□ -2.32
snR38	snR38	SDP1	P40479	209 aa		0.53	□□□□□ -2.32
snR38	snR38	PKH1	Q03407	766 aa		0.53	□□□□□ -2.32
snR38	snR38	YPR196W	Q06595	470 aa		0.53	□□□□□ -2.32
snR38	snR38	PRP16	P15938	1071 aa	Predicted RBP	0.52	□□□□□ -2.33
snR38	snR38	SSA4	P22202	642 aa	Known RBP	0.52	□□□□□ -2.33
snR38	snR38	DBP2	P24783	546 aa	Known RBP	0.52	□□□□□ -2.33
snR38	snR38	KCC4	P25389	1037 aa		0.52	□□□□□ -2.33
snR38	snR38	BCD1	P38772	366 aa		0.52	□□□□□ -2.33
snR38	snR38	RTT107	P38850	1070 aa		0.52	□□□□□ -2.33
snR38	snR38	UBC11	P52492	156 aa		0.52	□□□□□ -2.33
snR38	snR38	YPL109C	Q02981	657 aa		0.52	□□□□□ -2.33
snR38	snR38	YML083C	Q04526	418 aa		0.52	□□□□□ -2.33
snR38	snR38	MRPL1	Q04599	285 aa		0.52	□□□□□ -2.33
snR38	snR38	ATG11	Q12527	1178 aa		0.52	□□□□□ -2.33
snR38	snR38	MPH2	P0CD99	609 aa		0.51	□□□□□ -2.33
snR38	snR38	CLN2	P20438	545 aa		0.51	□□□□□ -2.33
snR38	snR38	PRE9	P23638	258 aa	Known RBP	0.51	□□□□□ -2.33
snR38	snR38	BEM3	P32873	1128 aa		0.51	□□□□□ -2.33
snR38	snR38	GIC1	P38785	314 aa		0.51	□□□□□ -2.33
snR38	snR38	SKP2	P42843	763 aa		0.51	□□□□□ -2.33
snR38	snR38	SNO3	P43544	222 aa		0.51	□□□□□ -2.33
snR38	snR38	ATG4	P53867	494 aa		0.51	□□□□□ -2.33
snR38	snR38	RTT103	Q05543	409 aa		0.51	□□□□□ -2.33
snR38	snR38	BSC6	Q08280	497 aa		0.51	□□□□□ -2.33
snR38	snR38	CSR2	Q12734	1121 aa		0.51	□□□□□ -2.33
snR38	snR38	SEC8	P32855	1065 aa		0.5	□□□□□ -2.33
snR38	snR38	PCA1	P38360	1216 aa		0.5	□□□□□ -2.33
snR38	snR38	HXT13	P39924	564 aa		0.5	□□□□□ -2.33
snR38	snR38	SNF7	P39929	240 aa	Known RBP	0.5	□□□□□ -2.33
snR38	snR38	HXT16	P47185	567 aa		0.5	□□□□□ -2.33
snR38	snR38	HXT17	P53631	564 aa		0.5	□□□□□ -2.33
snR38	snR38	HXT15	P54854	567 aa		0.5	□□□□□ -2.33
snR38	snR38	NRG1	Q03125	231 aa		0.5	□□□□□ -2.33
snR38	snR38	YKL033W-A	Q86ZR7	236 aa		0.5	□□□□□ -2.33
snR38	snR38	STE12	P13574	688 aa		0.49	□□□□□ -2.33
snR38	snR38	HIR1	P32479	840 aa		0.49	□□□□□ -2.33
snR38	snR38	GMH1	P36125	273 aa		0.49	□□□□□ -2.33
snR38	snR38	TSL1	P38427	1098 aa	Known RBP	0.49	□□□□□ -2.33
snR38	snR38	GGA2	P38817	585 aa	Known RBP	0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 245 ms