RNA–Protein interactions for RNA: YPL135W

ISU1, Transcript of Conserved protein of the mitochondrial matrix, yeast

Gene ISU1, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISU1	YPL135W	SSL1	Q04673	461 aa	Predicted RBP	3.41	□□□□□ -1.86
ISU1	YPL135W	YLR001C	Q07895	862 aa		3.41	□□□□□ -1.86
ISU1	YPL135W	THI73	Q07904	523 aa		3.41	□□□□□ -1.86
ISU1	YPL135W	NUP145	P49687	1317 aa		3.41	□□□□□ -1.86
ISU1	YPL135W	PCL2	P25693	308 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	URA1	P28272	314 aa	Predicted RBP	3.4	□□□□□ -1.87
ISU1	YPL135W	CYS3	P31373	394 aa	Known RBP	3.4	□□□□□ -1.87
ISU1	YPL135W	STE13	P33894	931 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	STO1	P34160	861 aa	Known RBP	3.4	□□□□□ -1.87
ISU1	YPL135W	MCD4	P36051	919 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	SAP190	P36123	1033 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	CTH1	P47976	325 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	RAI1	P53063	387 aa	Known RBP	3.4	□□□□□ -1.87
ISU1	YPL135W	AIM14	P53109	570 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	MET13	P53128	600 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	YGR012W	P53206	393 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	GTF1	P53260	183 aa	Predicted RBP	3.4	□□□□□ -1.87
ISU1	YPL135W	HDA1	P53973	706 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	ROT1	Q03691	256 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	BRE4	Q07660	1125 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	TY1B-DR4	Q07793	1604 aa		3.4	□□□□□ -1.87
ISU1	YPL135W	SFL1	P20134	766 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	RPC82	P32349	654 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.39	□□□□□ -1.87	RIP-Chip
ISU1	YPL135W	OMA1	P36163	345 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	YIL108W	P40483	696 aa	Known RBP	3.39	□□□□□ -1.87
ISU1	YPL135W	CAF16	P43569	289 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	ALY2	P47029	1046 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	GCV2	P49095	1034 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	YGR237C	P50089	785 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	YGL081W	P53156	320 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	NOG2	P53742	486 aa	Known RBP	3.39	□□□□□ -1.87
ISU1	YPL135W	YKR011C	Q02209	353 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	UME1	Q03010	460 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	PLB2	Q03674	706 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	SIZ1	Q04195	904 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	CRR1	Q05790	422 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	CDA1	Q06702	301 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	REH1	Q06709	432 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	YOR022C	Q12204	715 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	YDL177C	Q12257	170 aa		3.39	□□□□□ -1.87
ISU1	YPL135W	PRC1	P00729	532 aa		3.38	□□□□□ -1.87
ISU1	YPL135W	HSF1	P10961	833 aa		3.38	□□□□□ -1.87
ISU1	YPL135W	SSB1	P11484	613 aa	Known RBP	3.38	□□□□□ -1.87
ISU1	YPL135W	TYE7	P33122	291 aa	Predicted RBP	3.38	□□□□□ -1.87
ISU1	YPL135W	TYS1	P36421	394 aa	Known RBP	3.38	□□□□□ -1.87
ISU1	YPL135W	POL12	P38121	705 aa	Predicted RBP	3.38	□□□□□ -1.87
ISU1	YPL135W	SSB2	P40150	613 aa	Known RBP	3.38	□□□□□ -1.87
ISU1	YPL135W	MND2	P40577	368 aa		3.38	□□□□□ -1.87
ISU1	YPL135W	SHR5	P41912	237 aa		3.38	□□□□□ -1.87
ISU1	YPL135W	PMT3	P47190	753 aa		3.38	□□□□□ -1.87
ISU1	YPL135W	PUS2	P53167	370 aa		3.38	□□□□□ -1.87
ISU1	YPL135W	VPS30	Q02948	557 aa		3.38	□□□□□ -1.87
ISU1	YPL135W	WHI4	Q07655	649 aa	Known RBP	3.38	□□□□□ -1.87
ISU1	YPL135W	DIF1	O13577	133 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	HMG1	P12683	1054 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	HOG1	P32485	435 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	TOM20	P35180	183 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	LRG1	P35688	1017 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	RPN10	P38886	268 aa	Known RBP	3.37	□□□□□ -1.87
ISU1	YPL135W	NUG1	P40010	520 aa	Known RBP	3.37	□□□□□ -1.87
ISU1	YPL135W	MGS1	P40151	587 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	RLP7	P40693	322 aa	Known RBP	3.37	□□□□□ -1.87
ISU1	YPL135W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.37	□□□□□ -1.87	not detected
ISU1	YPL135W	HXT16	P47185	567 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	UBC9	P50623	157 aa	Predicted RBP	3.37	□□□□□ -1.87
ISU1	YPL135W	GPG1	P53130	126 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	ORC3	P54790	616 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	SNP1	Q00916	300 aa	Predicted RBP	3.37	□□□□□ -1.87
ISU1	YPL135W	YOR352W	Q08816	343 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	FAP7	Q12055	197 aa	Predicted RBP	3.37	□□□□□ -1.87
ISU1	YPL135W	HAL9	Q12180	1030 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	YBR182C-A	Q8TGU6	64 aa		3.37	□□□□□ -1.87
ISU1	YPL135W	SKI3	P17883	1432 aa	Known RBP	3.36	□□□□□ -1.87
ISU1	YPL135W	SPE1	P08432	466 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	PRP19	P32523	503 aa	Known RBP	3.36	□□□□□ -1.87
ISU1	YPL135W	SWE1	P32944	819 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	POA1	P38218	177 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	PCM1	P38628	557 aa	Known RBP	3.36	□□□□□ -1.87
ISU1	YPL135W	SET5	P38890	526 aa	Known RBP	3.36	□□□□□ -1.87
ISU1	YPL135W	DOT6	P40059	670 aa	Known RBP	3.36	□□□□□ -1.87
ISU1	YPL135W	YJR096W	P47137	282 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	YJR120W	P47157	116 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	PSP2	P50109	593 aa	Known RBP	3.36	□□□□□ -1.87
ISU1	YPL135W	INP52	P50942	1183 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	NHX1	Q04121	633 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	YDR338C	Q05497	695 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	ATG33	Q06485	197 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	GUD1	Q07729	489 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	TPO1	Q07824	586 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	GUP2	Q08929	609 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	GIN4	Q12263	1142 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	DFG16	Q99234	619 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	Q0142	Q9ZZW4	58 aa		3.36	□□□□□ -1.87
ISU1	YPL135W	MIH1	P23748	554 aa		3.35	□□□□□ -1.87
ISU1	YPL135W	YEL1	P34225	687 aa		3.35	□□□□□ -1.87
ISU1	YPL135W	LAM1	P38851	1228 aa		3.35	□□□□□ -1.87
ISU1	YPL135W	ENV11	P53246	860 aa		3.35	□□□□□ -1.87
ISU1	YPL135W	RTS3	P53289	263 aa		3.35	□□□□□ -1.87
ISU1	YPL135W	SNO2	P53823	222 aa		3.35	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 78.6 ms