RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W YDL177CQ12257 170 aa3.16□□□□□ -1.9
BRO1YPL084W RPS9AO13516 197 aaKnown RBP3.16□□□□□ -1.9
BRO1YPL084W HSF1P10961 833 aa3.16□□□□□ -1.9
BRO1YPL084W YCL002CP25565 263 aa3.16□□□□□ -1.9
BRO1YPL084W CYS3P31373 394 aaKnown RBP3.16□□□□□ -1.9
BRO1YPL084W STO1P34160 861 aaKnown RBP3.16□□□□□ -1.9
BRO1YPL084W POL12P38121 705 aaPredicted RBP3.16□□□□□ -1.9
BRO1YPL084W CAF16P43569 289 aa3.16□□□□□ -1.9
BRO1YPL084W SSL1Q04673 461 aaPredicted RBP3.16□□□□□ -1.9
BRO1YPL084W CDA1Q06702 301 aa3.16□□□□□ -1.9
BRO1YPL084W REH1Q06709 432 aa3.16□□□□□ -1.9
BRO1YPL084W YOR352WQ08816 343 aa3.16□□□□□ -1.9
BRO1YPL084W GRX4P32642 244 aa3.15□□□□□ -1.91
BRO1YPL084W TYE7P33122 291 aaPredicted RBP3.15□□□□□ -1.91
BRO1YPL084W MCD4P36051 919 aa3.15□□□□□ -1.91
BRO1YPL084W GCV2P49095 1034 aa3.15□□□□□ -1.91
BRO1YPL084W GTF1P53260 183 aaPredicted RBP3.15□□□□□ -1.91
BRO1YPL084W SDA1P53313 767 aaKnown RBP3.15□□□□□ -1.91
BRO1YPL084W HDA1P53973 706 aa3.15□□□□□ -1.91
BRO1YPL084W YKR011CQ02209 353 aa3.15□□□□□ -1.91
BRO1YPL084W PLB2Q03674 706 aa3.15□□□□□ -1.91
BRO1YPL084W DFG16Q99234 619 aa3.15□□□□□ -1.91
BRO1YPL084W PCL2P25693 308 aa3.15□□□□□ -1.91
BRO1YPL084W MAC1P35192 417 aa3.15□□□□□ -1.91
BRO1YPL084W LRG1P35688 1017 aa3.15□□□□□ -1.91
BRO1YPL084W SAP190P36123 1033 aa3.15□□□□□ -1.91
BRO1YPL084W YIL108WP40483 696 aaKnown RBP3.15□□□□□ -1.91
BRO1YPL084W MND2P40577 368 aa3.15□□□□□ -1.91
BRO1YPL084W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.15□□□□□ -1.91not detected
BRO1YPL084W YGL081WP53156 320 aa3.15□□□□□ -1.91
BRO1YPL084W SNO2P53823 222 aa3.15□□□□□ -1.91
BRO1YPL084W SGD1Q06132 899 aa3.15□□□□□ -1.91
BRO1YPL084W YLR001CQ07895 862 aa3.15□□□□□ -1.91
BRO1YPL084W UBP12P39538 1254 aa3.14□□□□□ -1.91
BRO1YPL084W YEN1P40028 759 aa3.14□□□□□ -1.91
BRO1YPL084W ALY2P47029 1046 aa3.14□□□□□ -1.91
BRO1YPL084W PSP2P50109 593 aaKnown RBP3.14□□□□□ -1.91
BRO1YPL084W MRPL22P53881 309 aa3.14□□□□□ -1.91
BRO1YPL084W THI73Q07904 523 aa3.14□□□□□ -1.91
BRO1YPL084W SFL1P20134 766 aa3.14□□□□□ -1.91
BRO1YPL084W POA1P38218 177 aa3.14□□□□□ -1.91
BRO1YPL084W LAM1P38851 1228 aa3.14□□□□□ -1.91
BRO1YPL084W RLP7P40693 322 aaKnown RBP3.14□□□□□ -1.91
BRO1YPL084W SHR5P41912 237 aa3.14□□□□□ -1.91
BRO1YPL084W MET13P53128 600 aa3.14□□□□□ -1.91
BRO1YPL084W PUS2P53167 370 aa3.14□□□□□ -1.91
BRO1YPL084W IOC4Q04213 475 aa3.14□□□□□ -1.91
BRO1YPL084W PRC1P00729 532 aa3.13□□□□□ -1.91
BRO1YPL084W RPN10P38886 268 aaKnown RBP3.13□□□□□ -1.91
BRO1YPL084W HXT16P47185 567 aa3.13□□□□□ -1.91
BRO1YPL084W SNP1Q00916 300 aaPredicted RBP3.13□□□□□ -1.91
BRO1YPL084W YOR022CQ12204 715 aa3.13□□□□□ -1.91
BRO1YPL084W YBR182C-AQ8TGU6 64 aa3.13□□□□□ -1.91
BRO1YPL084W DIF1O13577 133 aa3.13□□□□□ -1.91
BRO1YPL084W SPE1P08432 466 aa3.13□□□□□ -1.91
BRO1YPL084W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.13□□□□□ -1.91not detected
BRO1YPL084W HOG1P32485 435 aa3.13□□□□□ -1.91
BRO1YPL084W MEF2P39677 819 aa3.13□□□□□ -1.91
BRO1YPL084W PMT3P47190 753 aa3.13□□□□□ -1.91
BRO1YPL084W YGR237CP50089 785 aa3.13□□□□□ -1.91
BRO1YPL084W AIM14P53109 570 aa3.13□□□□□ -1.91
BRO1YPL084W PBP1P53297 722 aaKnown RBP3.13□□□□□ -1.91
BRO1YPL084W CRR1Q05790 422 aa3.13□□□□□ -1.91
BRO1YPL084W WHI4Q07655 649 aaKnown RBP3.13□□□□□ -1.91
BRO1YPL084W TPO1Q07824 586 aa3.13□□□□□ -1.91
BRO1YPL084W HAL9Q12180 1030 aa3.13□□□□□ -1.91
BRO1YPL084W YEL1P34225 687 aa3.12□□□□□ -1.91
BRO1YPL084W SET5P38890 526 aaKnown RBP3.12□□□□□ -1.91
BRO1YPL084W MGS1P40151 587 aa3.12□□□□□ -1.91
BRO1YPL084W UME1Q03010 460 aa3.12□□□□□ -1.91
BRO1YPL084W NUP145P49687 1317 aa3.12□□□□□ -1.91
BRO1YPL084W ATG19P35193 415 aa3.12□□□□□ -1.91
BRO1YPL084W TYS1P36421 394 aaKnown RBP3.12□□□□□ -1.91
BRO1YPL084W NHX1Q04121 633 aa3.12□□□□□ -1.91
BRO1YPL084W GIN4Q12263 1142 aa3.12□□□□□ -1.91
BRO1YPL084W SEG2P34250 1132 aa3.11□□□□□ -1.91
BRO1YPL084W PCM1P38628 557 aaKnown RBP3.11□□□□□ -1.91
BRO1YPL084W DOT6P40059 670 aaKnown RBP3.11□□□□□ -1.91
BRO1YPL084W MET12P46151 657 aa3.11□□□□□ -1.91
BRO1YPL084W ECL1P48235 211 aa3.11□□□□□ -1.91
BRO1YPL084W ATG33Q06485 197 aa3.11□□□□□ -1.91
BRO1YPL084W ADY3Q07732 790 aa3.11□□□□□ -1.91
BRO1YPL084W GPB1Q08886 897 aa3.11□□□□□ -1.91
BRO1YPL084W FBP1P09201 348 aa3.11□□□□□ -1.91
BRO1YPL084W SSB1P11484 613 aaKnown RBP3.11□□□□□ -1.91
BRO1YPL084W SSB2P40150 613 aaKnown RBP3.11□□□□□ -1.91
BRO1YPL084W DUS4Q06063 367 aa3.11□□□□□ -1.91
BRO1YPL084W GUD1Q07729 489 aa3.11□□□□□ -1.91
BRO1YPL084W GUP2Q08929 609 aa3.11□□□□□ -1.91
BRO1YPL084W EMC1P25574 760 aa3.1□□□□□ -1.91
BRO1YPL084W HSL7P38274 827 aa3.1□□□□□ -1.91
BRO1YPL084W UBC9P50623 157 aaPredicted RBP3.1□□□□□ -1.91
BRO1YPL084W GPG1P53130 126 aa3.1□□□□□ -1.91
BRO1YPL084W NPY1P53164 384 aa3.1□□□□□ -1.91
BRO1YPL084W DUS1P53759 423 aaKnown RBP3.1□□□□□ -1.91
BRO1YPL084W GCN5Q03330 439 aa3.1□□□□□ -1.91
BRO1YPL084W COG8Q04632 607 aa3.1□□□□□ -1.91
BRO1YPL084W YDR338CQ05497 695 aa3.1□□□□□ -1.91
BRO1YPL084W RXT3Q07458 294 aa3.1□□□□□ -1.91
BRO1YPL084W FAP7Q12055 197 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms