RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	ZPR1	P53303	486 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	ARK1	P53974	638 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	MTG1	Q03151	367 aa	Predicted RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	YDL124W	Q07551	312 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	CMS1	Q07897	291 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	SEC20	P28791	383 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	MRF1	P30775	413 aa	Predicted RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	PLC1	P32383	869 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	RAD54	P32863	898 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	YFR006W	P43590	535 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	YJR142W	P47173	342 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	ENV11	P53246	860 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	DIP5	P53388	608 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	ARP6	Q12509	438 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	SRV2	P17555	526 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	EUG1	P32474	517 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	UGA4	P32837	571 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	ERT1	P38140	529 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	RIP-Chip
NCR1	YPL006W	END3	P39013	349 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	FMS1	P50264	508 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	LSB1	P53281	241 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	VPS16	Q03308	798 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	OYE2	Q03558	400 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	GIR2	Q03768	265 aa	Predicted RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	TMA64	Q04600	565 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	FAR8	Q05040	523 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	DPL1	Q05567	589 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	SEC39	Q12745	709 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	PCK1	P10963	549 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	SUP45	P12385	437 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	PTC3	P34221	468 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	RRT2	P38332	387 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	KAP123	P40069	1113 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	TMA22	P47089	198 aa	Predicted RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	MTC3	P53077	123 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	RPL22B	P56628	122 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	YPL109C	Q02981	657 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	TDA5	Q06417	326 aa	Known RBP	4.22	□□□□□ -1.73
NCR1	YPL006W	ACM1	Q08981	209 aa		4.22	□□□□□ -1.73
NCR1	YPL006W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
NCR1	YPL006W	ESS1	P22696	170 aa		4.21	□□□□□ -1.73
NCR1	YPL006W	ECM2	P38241	364 aa	Known RBP	4.21	□□□□□ -1.73
NCR1	YPL006W	HIS2	P38635	335 aa		4.21	□□□□□ -1.73
NCR1	YPL006W	UTP7	P40055	554 aa	Known RBP	4.21	□□□□□ -1.73
NCR1	YPL006W	RIO2	P40160	425 aa	Known RBP	4.21	□□□□□ -1.73
NCR1	YPL006W	GPD2	P41911	440 aa	Known RBP	4.21	□□□□□ -1.73
NCR1	YPL006W	UTP6	Q02354	440 aa	Known RBP	4.21	□□□□□ -1.73
NCR1	YPL006W	SEN54	Q02825	467 aa	Predicted RBP	4.21	□□□□□ -1.73
NCR1	YPL006W	AAD16	Q02895	342 aa		4.21	□□□□□ -1.73
NCR1	YPL006W	TFB2	Q02939	513 aa		4.21	□□□□□ -1.73
NCR1	YPL006W	HIF1	Q12373	385 aa		4.21	□□□□□ -1.73
NCR1	YPL006W	SEY1	Q99287	776 aa		4.21	□□□□□ -1.73
NCR1	YPL006W	CLN3	P13365	580 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	KAR3	P17119	729 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	BAS1	P22035	811 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
NCR1	YPL006W	CDC11	P32458	415 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	UBP11	P36026	717 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	YBR032W	P38223	100 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	CST26	P38226	397 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	EXO5	P38289	585 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	VHR2	P40041	505 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	ATG1	P53104	897 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	CPR6	P53691	371 aa	Known RBP	4.21	□□□□□ -1.74
NCR1	YPL006W	SPC24	Q04477	213 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	YML082W	Q04533	649 aa	Known RBP	4.21	□□□□□ -1.74
NCR1	YPL006W	YLR326W	Q06170	240 aa	Known RBP	4.21	□□□□□ -1.74
NCR1	YPL006W	CUR1	Q06469	252 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	OSW1	Q08692	278 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	SNF1	P06782	633 aa	Known RBP	4.21	□□□□□ -1.74
NCR1	YPL006W	HEM15	P16622	393 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	IME1	P21190	360 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	KIP1	P28742	1111 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	GPI10	P30777	616 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
NCR1	YPL006W	SAK1	P38990	1142 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	ATG36	P46983	293 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	YNL040W	P53960	456 aa	Predicted RBP	4.21	□□□□□ -1.74
NCR1	YPL006W	RLP24	Q07915	199 aa	Known RBP	4.21	□□□□□ -1.74
NCR1	YPL006W	PUS1	Q12211	544 aa	Known RBP	4.21	□□□□□ -1.74
NCR1	YPL006W	YDL206W	Q12424	762 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	GRX6	Q12438	231 aa		4.21	□□□□□ -1.74
NCR1	YPL006W	CBF1	P17106	351 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	PRP4	P20053	465 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	ADP1	P25371	1049 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	PWP2	P25635	923 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	SEC21	P32074	935 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	SWI3	P32591	825 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	RAD5	P32849	1169 aa	Predicted RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	INA22	P40576	216 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	COS5	P47187	383 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	ALD6	P54115	500 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	LAP2	Q10740	671 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	RRG1	Q12167	365 aa	Predicted RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	SPT2	P06843	333 aa	Predicted RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	ILV2	P07342	687 aa	Known RBP	4.2	□□□□□ -1.74
NCR1	YPL006W	SRD1	P09007	221 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	POL3	P15436	1097 aa		4.2	□□□□□ -1.74
NCR1	YPL006W	MVD1	P32377	396 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 33.3 ms