RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	ENV11	P53246	860 aa		13.16	□□□□□ -0.3
TIR4	YOR009W	YLR297W	Q05899	129 aa		13.16	□□□□□ -0.3
TIR4	YOR009W	MTF2	P10849	440 aa		13.16	□□□□□ -0.3
TIR4	YOR009W	DBP1	P24784	617 aa	Known RBP	13.16	□□□□□ -0.3
TIR4	YOR009W	SMY2	P32909	740 aa	Known RBP	13.16	□□□□□ -0.3
TIR4	YOR009W	CSR1	Q06705	408 aa	Known RBP	13.16	□□□□□ -0.3
TIR4	YOR009W	SEC23	P15303	768 aa	Known RBP	13.15	□□□□□ -0.3
TIR4	YOR009W	UBC1	P21734	215 aa	Known RBP	13.15	□□□□□ -0.3
TIR4	YOR009W	NIP100	P33420	868 aa		13.15	□□□□□ -0.3
TIR4	YOR009W	ACF4	P47129	309 aa		13.15	□□□□□ -0.3
TIR4	YOR009W	YPR078C	Q06813	372 aa		13.15	□□□□□ -0.3
TIR4	YOR009W	MOT1	P32333	1867 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	SWI6	P09959	803 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	GUA1	P38625	525 aa	Known RBP	13.14	□□□□□ -0.31
TIR4	YOR009W	SDS3	P40505	327 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	YAP5	P40574	245 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	COS5	P47187	383 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	ORC5	P50874	479 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	CUL3	P53202	744 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	TPO2	P53283	614 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	SLX4	Q12098	748 aa		13.14	□□□□□ -0.31
TIR4	YOR009W	TOM70	P07213	617 aa	Known RBP	13.13	□□□□□ -0.31
TIR4	YOR009W	VMA1	P17255	1071 aa	Known RBP	13.13	□□□□□ -0.31
TIR4	YOR009W	PET123	P17558	318 aa		13.13	□□□□□ -0.31
TIR4	YOR009W	SMC1	P32908	1225 aa		13.13	□□□□□ -0.31
TIR4	YOR009W	STO1	P34160	861 aa	Known RBP	13.13	□□□□□ -0.31
TIR4	YOR009W	MMM1	P41800	426 aa		13.13	□□□□□ -0.31
TIR4	YOR009W	SKP2	P42843	763 aa		13.13	□□□□□ -0.31
TIR4	YOR009W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	13.13	□□□□□ -0.31	not detected
TIR4	YOR009W	YDR090C	Q03193	310 aa		13.13	□□□□□ -0.31
TIR4	YOR009W	OSW2	Q12202	724 aa		13.13	□□□□□ -0.31
TIR4	YOR009W	RAD57	P25301	460 aa		13.12	□□□□□ -0.31
TIR4	YOR009W	CDC11	P32458	415 aa		13.12	□□□□□ -0.31
TIR4	YOR009W	NPP2	P39997	493 aa		13.12	□□□□□ -0.31
TIR4	YOR009W	PSF2	P40359	213 aa		13.12	□□□□□ -0.31
TIR4	YOR009W	ASN1	P49089	572 aa	Known RBP	13.12	□□□□□ -0.31
TIR4	YOR009W	HSH155	P49955	971 aa	Known RBP	13.12	□□□□□ -0.31
TIR4	YOR009W	UTP5	Q04177	643 aa	Known RBP	13.12	□□□□□ -0.31
TIR4	YOR009W	YDL206W	Q12424	762 aa		13.12	□□□□□ -0.31
TIR4	YOR009W	ATG11	Q12527	1178 aa		13.12	□□□□□ -0.31
TIR4	YOR009W	DPH2	P32461	534 aa		13.11	□□□□□ -0.31
TIR4	YOR009W	GPT2	P36148	743 aa		13.11	□□□□□ -0.31
TIR4	YOR009W	SMC2	P38989	1170 aa	Known RBP	13.11	□□□□□ -0.31
TIR4	YOR009W	EFM4	P40516	257 aa		13.11	□□□□□ -0.31
TIR4	YOR009W	APT1	P49435	187 aa	Known RBP	13.11	□□□□□ -0.31
TIR4	YOR009W	NCS6	P53088	359 aa		13.11	□□□□□ -0.31
TIR4	YOR009W	MSC2	Q03455	724 aa		13.11	□□□□□ -0.31
TIR4	YOR009W	UTP14	Q04500	899 aa	Known RBP	13.11	□□□□□ -0.31
TIR4	YOR009W	TMT1	P32643	299 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	VID24	P38263	362 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	AFG3	P39925	761 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	MNP1	P53163	194 aa	Predicted RBP	13.1	□□□□□ -0.31
TIR4	YOR009W	DAK1	P54838	584 aa	Known RBP	13.1	□□□□□ -0.31
TIR4	YOR009W	SUT2	Q12286	268 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	HIF1	Q12373	385 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	RIF1	P29539	1916 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	RAD54	P32863	898 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	13.1	□□□□□ -0.31	not detected
TIR4	YOR009W	YJR107W	P47145	328 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	TRS130	Q03660	1102 aa		13.1	□□□□□ -0.31
TIR4	YOR009W	JNM1	P36224	373 aa		13.09	□□□□□ -0.31
TIR4	YOR009W	MCX1	P38323	520 aa	Predicted RBP	13.09	□□□□□ -0.31
TIR4	YOR009W	CAJ1	P39101	391 aa		13.09	□□□□□ -0.31
TIR4	YOR009W	ESBP6	P53918	673 aa		13.09	□□□□□ -0.31
TIR4	YOR009W	ECM7	Q06200	448 aa		13.09	□□□□□ -0.31
TIR4	YOR009W	YLR001C	Q07895	862 aa		13.09	□□□□□ -0.31
TIR4	YOR009W	HFI1	Q12060	488 aa		13.09	□□□□□ -0.31
TIR4	YOR009W	MCM16	Q12262	181 aa		13.09	□□□□□ -0.31
TIR4	YOR009W	TRP2	P00899	507 aa	Known RBP	13.08	□□□□□ -0.32
TIR4	YOR009W	KIC1	P38692	1080 aa		13.08	□□□□□ -0.32
TIR4	YOR009W	SET5	P38890	526 aa	Known RBP	13.08	□□□□□ -0.32
TIR4	YOR009W	SMC3	P47037	1230 aa		13.08	□□□□□ -0.32
TIR4	YOR009W	BOP3	P53958	396 aa		13.08	□□□□□ -0.32
TIR4	YOR009W	YML020W	Q03722	664 aa		13.08	□□□□□ -0.32
TIR4	YOR009W	OPY2	Q06810	360 aa		13.08	□□□□□ -0.32
TIR4	YOR009W	YOR131C	Q12486	218 aa		13.08	□□□□□ -0.32
TIR4	YOR009W	ZPS1	Q12512	249 aa		13.08	□□□□□ -0.32
TIR4	YOR009W	SNA3	P14359	133 aa		13.07	□□□□□ -0.32
TIR4	YOR009W	KIP1	P28742	1111 aa		13.07	□□□□□ -0.32
TIR4	YOR009W	SHE10	P53075	577 aa		13.07	□□□□□ -0.32
TIR4	YOR009W	YML082W	Q04533	649 aa	Known RBP	13.07	□□□□□ -0.32
TIR4	YOR009W	SOV1	Q04748	898 aa		13.07	□□□□□ -0.32
TIR4	YOR009W	IME1	P21190	360 aa		13.06	□□□□□ -0.32
TIR4	YOR009W	HXT1	P32465	570 aa		13.06	□□□□□ -0.32
TIR4	YOR009W	TRZ1	P36159	838 aa	Predicted RBP	13.06	□□□□□ -0.32
TIR4	YOR009W	YMR124W	P39523	943 aa	Known RBP	13.06	□□□□□ -0.32
TIR4	YOR009W	JJJ3	P47138	172 aa		13.06	□□□□□ -0.32
TIR4	YOR009W	HOS3	Q02959	697 aa	Known RBP	13.06	□□□□□ -0.32
TIR4	YOR009W	SHS1	Q07657	551 aa		13.06	□□□□□ -0.32
TIR4	YOR009W	SIL1	Q08199	421 aa		13.06	□□□□□ -0.32
TIR4	YOR009W	RTP1	Q12751	981 aa		13.06	□□□□□ -0.32
TIR4	YOR009W	WHI2	P12611	486 aa		13.05	□□□□□ -0.32
TIR4	YOR009W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	13.05	□□□□□ -0.32	not detected
TIR4	YOR009W	CLA4	P48562	842 aa		13.05	□□□□□ -0.32
TIR4	YOR009W	TBF1	Q02457	562 aa		13.05	□□□□□ -0.32
TIR4	YOR009W	CUS1	Q02554	436 aa	Predicted RBP	13.05	□□□□□ -0.32
TIR4	YOR009W	SML1	Q04964	104 aa		13.05	□□□□□ -0.32
TIR4	YOR009W	RGA2	Q06407	1009 aa		13.05	□□□□□ -0.32
TIR4	YOR009W	COX4	P04037	155 aa		13.04	□□□□□ -0.32
TIR4	YOR009W	RPL4A	P10664	362 aa	Known RBP	13.04	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms