RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSP3	YOR003W	MRF1	P30775	413 aa	Predicted RBP	11.68	□□□□□ -0.54
YSP3	YOR003W	TGL3	P40308	642 aa		11.68	□□□□□ -0.54
YSP3	YOR003W	RSC8	P43609	557 aa	Known RBP	11.68	□□□□□ -0.54
YSP3	YOR003W	YNL134C	P53912	376 aa	Known RBP	11.68	□□□□□ -0.54
YSP3	YOR003W	TRS130	Q03660	1102 aa		11.68	□□□□□ -0.54
YSP3	YOR003W	ETT1	Q08421	412 aa	Known RBP	11.68	□□□□□ -0.54
YSP3	YOR003W	TCO89	Q08921	799 aa		11.68	□□□□□ -0.54
YSP3	YOR003W	COX4	P04037	155 aa		11.67	□□□□□ -0.54
YSP3	YOR003W	RPL22A	P05749	121 aa	Known RBP	11.67	□□□□□ -0.54
YSP3	YOR003W	NPR3	P38742	1146 aa		11.67	□□□□□ -0.54
YSP3	YOR003W	YGR237C	P50089	785 aa		11.67	□□□□□ -0.54
YSP3	YOR003W	UTP14	Q04500	899 aa	Known RBP	11.67	□□□□□ -0.54
YSP3	YOR003W	SPP382	Q06411	708 aa	Predicted RBP	11.67	□□□□□ -0.54
YSP3	YOR003W	SHS1	Q07657	551 aa		11.67	□□□□□ -0.54
YSP3	YOR003W	GLN3	P18494	730 aa		11.66	□□□□□ -0.54
YSP3	YOR003W	ECM7	Q06200	448 aa		11.66	□□□□□ -0.54
YSP3	YOR003W	TAF13	P11747	167 aa		11.65	□□□□□ -0.54
YSP3	YOR003W	OM45	P16547	393 aa		11.65	□□□□□ -0.54
YSP3	YOR003W	YHL026C	P38740	315 aa		11.65	□□□□□ -0.54
YSP3	YOR003W	EMI2	Q04409	500 aa	Known RBP	11.65	□□□□□ -0.54
YSP3	YOR003W	RPL4A	P10664	362 aa	Known RBP	11.64	□□□□□ -0.55
YSP3	YOR003W	GSY2	P27472	705 aa		11.64	□□□□□ -0.55
YSP3	YOR003W	RPN12	P32496	274 aa		11.64	□□□□□ -0.55
YSP3	YOR003W	SKG6	P32900	734 aa	Predicted RBP	11.64	□□□□□ -0.55
YSP3	YOR003W	CSE2	P33308	149 aa		11.64	□□□□□ -0.55
YSP3	YOR003W	MRX3	P38172	270 aa		11.64	□□□□□ -0.55
YSP3	YOR003W	SLX1	P38324	304 aa		11.64	□□□□□ -0.55
YSP3	YOR003W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	11.64	□□□□□ -0.55	RIP-Chip
YSP3	YOR003W	RPL4B	P49626	362 aa	Known RBP	11.64	□□□□□ -0.55
YSP3	YOR003W	MCM6	P53091	1017 aa	Known RBP	11.64	□□□□□ -0.55
YSP3	YOR003W	KRE33	P53914	1056 aa	Known RBP	11.64	□□□□□ -0.55
YSP3	YOR003W	CDC53	Q12018	815 aa	Known RBP	11.64	□□□□□ -0.55
YSP3	YOR003W	MED1	Q12321	566 aa		11.64	□□□□□ -0.55
YSP3	YOR003W	RRM3	P38766	723 aa		11.63	□□□□□ -0.55
YSP3	YOR003W	YAP1801	P38856	637 aa		11.63	□□□□□ -0.55
YSP3	YOR003W	OPT1	P40897	799 aa		11.63	□□□□□ -0.55
YSP3	YOR003W	LCB2	P40970	561 aa		11.63	□□□□□ -0.55
YSP3	YOR003W	ASN1	P49089	572 aa	Known RBP	11.63	□□□□□ -0.55
YSP3	YOR003W	ALT2	P52892	507 aa		11.63	□□□□□ -0.55
YSP3	YOR003W	SKY1	Q03656	742 aa		11.63	□□□□□ -0.55
YSP3	YOR003W	YOR022C	Q12204	715 aa		11.63	□□□□□ -0.55
YSP3	YOR003W	MUD1	P32605	298 aa	Known RBP	11.62	□□□□□ -0.55
YSP3	YOR003W	BCD1	P38772	366 aa		11.62	□□□□□ -0.55
YSP3	YOR003W	UBP5	P39944	805 aa		11.62	□□□□□ -0.55
YSP3	YOR003W	HSH155	P49955	971 aa	Known RBP	11.62	□□□□□ -0.55
YSP3	YOR003W	VID30	P53076	958 aa		11.62	□□□□□ -0.55
YSP3	YOR003W	EAF7	P53911	425 aa	Known RBP	11.62	□□□□□ -0.55
YSP3	YOR003W	PNG1	Q02890	363 aa		11.62	□□□□□ -0.55
YSP3	YOR003W	YLR455W	Q06188	304 aa		11.62	□□□□□ -0.55
YSP3	YOR003W	MLH2	Q07980	695 aa		11.62	□□□□□ -0.55
YSP3	YOR003W	PRR1	P28708	518 aa		11.61	□□□□□ -0.55
YSP3	YOR003W	BUD2	P33314	1104 aa		11.61	□□□□□ -0.55
YSP3	YOR003W	ARL1	P38116	183 aa	Known RBP	11.61	□□□□□ -0.55
YSP3	YOR003W	MMS4	P38257	691 aa		11.61	□□□□□ -0.55
YSP3	YOR003W	ESL1	P40456	1118 aa		11.61	□□□□□ -0.55
YSP3	YOR003W	YOR238W	Q08634	303 aa		11.61	□□□□□ -0.55
YSP3	YOR003W	CHS2	P14180	963 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	MSD1	P15179	658 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	ADK2	P26364	225 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	RPT1	P33299	467 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	FMP10	P40098	244 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	AIP1	P46680	615 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	SHE10	P53075	577 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	TIM8	P57744	87 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	SSL2	Q00578	843 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	PRC1	P00729	532 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	CDC37	P06101	506 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	TIF1	P10081	395 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	RSA4	P25382	515 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.6	□□□□□ -0.55	not detected
YSP3	YOR003W	SNF7	P39929	240 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	YER186C	P40101	306 aa		11.6	□□□□□ -0.55
YSP3	YOR003W	ALG11	P53954	548 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	CWC21	Q03375	135 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	EBS1	Q03466	884 aa	Known RBP	11.6	□□□□□ -0.55
YSP3	YOR003W	VMA1	P17255	1071 aa	Known RBP	11.59	□□□□□ -0.55
YSP3	YOR003W	MRC1	P25588	1096 aa		11.59	□□□□□ -0.55
YSP3	YOR003W	RPC25	P35718	212 aa		11.59	□□□□□ -0.55
YSP3	YOR003W	ADE17	P38009	592 aa	Known RBP	11.59	□□□□□ -0.55
YSP3	YOR003W	ULI1	P43604	169 aa		11.59	□□□□□ -0.55
YSP3	YOR003W	STB4	P50104	949 aa		11.59	□□□□□ -0.55
YSP3	YOR003W	YAP7	Q08182	245 aa		11.59	□□□□□ -0.55
YSP3	YOR003W	OSH2	Q12451	1283 aa		11.59	□□□□□ -0.55
YSP3	YOR003W	MAK16	P10962	306 aa	Predicted RBP	11.58	□□□□□ -0.56
YSP3	YOR003W	ROX1	P25042	368 aa		11.58	□□□□□ -0.56
YSP3	YOR003W	HEL1	P36113	551 aa		11.58	□□□□□ -0.56
YSP3	YOR003W	PSY4	P38193	441 aa		11.58	□□□□□ -0.56
YSP3	YOR003W	NPP2	P39997	493 aa		11.58	□□□□□ -0.56
YSP3	YOR003W	YAP5	P40574	245 aa		11.58	□□□□□ -0.56
YSP3	YOR003W	GFD1	Q04839	188 aa	Known RBP	11.58	□□□□□ -0.56
YSP3	YOR003W	SLX4	Q12098	748 aa		11.58	□□□□□ -0.56
YSP3	YOR003W	ATE1	P16639	503 aa		11.57	□□□□□ -0.56
YSP3	YOR003W	YET1	P35723	206 aa		11.57	□□□□□ -0.56
YSP3	YOR003W	APN2	P38207	520 aa		11.57	□□□□□ -0.56
YSP3	YOR003W	XDJ1	P39102	459 aa		11.57	□□□□□ -0.56
YSP3	YOR003W	CEF1	Q03654	590 aa	Predicted RBP	11.57	□□□□□ -0.56
YSP3	YOR003W	DON1	Q05610	365 aa		11.57	□□□□□ -0.56
YSP3	YOR003W	HCR1	Q05775	265 aa	Known RBP	11.57	□□□□□ -0.56
YSP3	YOR003W	YDR034W-B	Q6Q5X2	51 aa		11.57	□□□□□ -0.56
YSP3	YOR003W	SPT2	P06843	333 aa	Predicted RBP	11.56	□□□□□ -0.56

Retrieved 100 of 5,963 RNA–protein pairs in 25.7 ms