RNA–Protein interactions for RNA: YNL078W

NIS1, Transcript of Protein localized in the bud neck at G2/M phase, yeast

Gene NIS1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIS1	YNL078W	DOM34	P33309	386 aa		4.92	□□□□□ -1.62
NIS1	YNL078W	CCM1	P48237	864 aa	Predicted RBP	4.92	□□□□□ -1.62
NIS1	YNL078W	PBP1	P53297	722 aa	Known RBP	4.92	□□□□□ -1.62
NIS1	YNL078W	YDL124W	Q07551	312 aa	Known RBP	4.92	□□□□□ -1.62
NIS1	YNL078W	HMI1	Q12039	706 aa		4.92	□□□□□ -1.62
NIS1	YNL078W	PDR10	P51533	1564 aa		4.91	□□□□□ -1.62
NIS1	YNL078W	HSF1	P10961	833 aa		4.91	□□□□□ -1.62
NIS1	YNL078W	GAL11	P19659	1081 aa		4.91	□□□□□ -1.62
NIS1	YNL078W	EMC1	P25574	760 aa		4.91	□□□□□ -1.62
NIS1	YNL078W	RXT3	Q07458	294 aa		4.91	□□□□□ -1.62
NIS1	YNL078W	ACK1	Q07622	623 aa	Predicted RBP	4.91	□□□□□ -1.62
NIS1	YNL078W	ESP1	Q03018	1630 aa		4.9	□□□□□ -1.62
NIS1	YNL078W	NOT3	P06102	836 aa	Known RBP	4.9	□□□□□ -1.63
NIS1	YNL078W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
NIS1	YNL078W	TIM23	P32897	222 aa		4.9	□□□□□ -1.63
NIS1	YNL078W	POA1	P38218	177 aa		4.9	□□□□□ -1.63
NIS1	YNL078W	CHZ1	P40019	153 aa	Predicted RBP	4.9	□□□□□ -1.63
NIS1	YNL078W	MET12	P46151	657 aa		4.9	□□□□□ -1.63
NIS1	YNL078W	YAP6	Q03935	383 aa		4.9	□□□□□ -1.63
NIS1	YNL078W	WHI4	Q07655	649 aa	Known RBP	4.9	□□□□□ -1.63
NIS1	YNL078W	ENV7	Q12003	364 aa		4.9	□□□□□ -1.63
NIS1	YNL078W	PEP1	P32319	1579 aa		4.9	□□□□□ -1.63
NIS1	YNL078W	CFT1	Q06632	1357 aa	Known RBP	4.9	□□□□□ -1.63
NIS1	YNL078W	TOM70	P07213	617 aa	Known RBP	4.89	□□□□□ -1.63
NIS1	YNL078W	SPE1	P08432	466 aa		4.89	□□□□□ -1.63
NIS1	YNL078W	STE13	P33894	931 aa		4.89	□□□□□ -1.63
NIS1	YNL078W	NUP82	P40368	713 aa		4.89	□□□□□ -1.63
NIS1	YNL078W	CHA4	P43634	648 aa		4.89	□□□□□ -1.63
NIS1	YNL078W	RAI1	P53063	387 aa	Known RBP	4.89	□□□□□ -1.63
NIS1	YNL078W	HDA1	P53973	706 aa		4.89	□□□□□ -1.63
NIS1	YNL078W	SSL1	Q04673	461 aa	Predicted RBP	4.89	□□□□□ -1.63
NIS1	YNL078W	BUD4	P47136	1447 aa		4.89	□□□□□ -1.63
NIS1	YNL078W	HIS5	P07172	385 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	CLC1	P17891	233 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	RPD3	P32561	433 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	LST4	P34239	828 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	FLR1	P38124	548 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	GYP8	P43570	497 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	MAL11	P53048	616 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	YGR283C	P53336	341 aa	Predicted RBP	4.88	□□□□□ -1.63
NIS1	YNL078W	MLP2	P40457	1679 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	SRB8	P25648	1427 aa		4.88	□□□□□ -1.63
NIS1	YNL078W	OPY1	P38271	328 aa		4.87	□□□□□ -1.63
NIS1	YNL078W	GDH3	P39708	457 aa		4.87	□□□□□ -1.63
NIS1	YNL078W	URM1	P40554	99 aa	Predicted RBP	4.87	□□□□□ -1.63
NIS1	YNL078W	TAF1	P46677	1066 aa		4.87	□□□□□ -1.63
NIS1	YNL078W	TCB2	P48231	1178 aa		4.87	□□□□□ -1.63
NIS1	YNL078W	YLR224W	Q05947	369 aa		4.87	□□□□□ -1.63
NIS1	YNL078W	DNA2	P38859	1522 aa		4.87	□□□□□ -1.63
NIS1	YNL078W	FBP1	P09201	348 aa		4.86	□□□□□ -1.63
NIS1	YNL078W	PLB1	P39105	664 aa		4.86	□□□□□ -1.63
NIS1	YNL078W	ALG2	P43636	503 aa		4.86	□□□□□ -1.63
NIS1	YNL078W	TY4A-J	P47023	414 aa		4.86	□□□□□ -1.63
NIS1	YNL078W	NOP12	Q08208	459 aa	Known RBP	4.86	□□□□□ -1.63
NIS1	YNL078W	UPC2	Q12151	913 aa		4.86	□□□□□ -1.63
NIS1	YNL078W	MYO4	P32492	1471 aa		4.86	□□□□□ -1.63
NIS1	YNL078W	YLR358C	O13565	187 aa		4.85	□□□□□ -1.63
NIS1	YNL078W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
NIS1	YNL078W	RFA1	P22336	621 aa	Known RBP	4.85	□□□□□ -1.63
NIS1	YNL078W	CEP3	P40969	608 aa		4.85	□□□□□ -1.63
NIS1	YNL078W	PSP2	P50109	593 aa	Known RBP	4.85	□□□□□ -1.63
NIS1	YNL078W	NCS6	P53088	359 aa		4.85	□□□□□ -1.63
NIS1	YNL078W	FPR4	Q06205	392 aa	Predicted RBP	4.85	□□□□□ -1.63
NIS1	YNL078W	ESC8	Q08119	714 aa		4.85	□□□□□ -1.63
NIS1	YNL078W	YLR419W	Q06698	1435 aa	Known RBP	4.85	□□□□□ -1.63
NIS1	YNL078W	SNQ2	P32568	1501 aa	Known RBP	4.84	□□□□□ -1.63
NIS1	YNL078W	PAN1	P32521	1480 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	YOR1	P53049	1477 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	TSC11	P40061	1430 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	MPH2	P0CD99	609 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	URA1	P28272	314 aa	Predicted RBP	4.84	□□□□□ -1.63
NIS1	YNL078W	STE14	P32584	239 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	SCT1	P32784	759 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	EMC3	P36039	253 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	HSV2	P50079	448 aa	Predicted RBP	4.84	□□□□□ -1.63
NIS1	YNL078W	YKR011C	Q02209	353 aa		4.84	□□□□□ -1.63
NIS1	YNL078W	CLU1	Q03690	1277 aa	Known RBP	4.84	□□□□□ -1.63
NIS1	YNL078W	URN1	Q06525	465 aa	Known RBP	4.84	□□□□□ -1.63
NIS1	YNL078W	YCF1	P39109	1515 aa	Known RBP	4.83	□□□□□ -1.64
NIS1	YNL078W	PHO8	P11491	566 aa		4.83	□□□□□ -1.64
NIS1	YNL078W	YCL002C	P25565	263 aa		4.83	□□□□□ -1.64
NIS1	YNL078W	ATG19	P35193	415 aa		4.83	□□□□□ -1.64
NIS1	YNL078W	YIL108W	P40483	696 aa	Known RBP	4.83	□□□□□ -1.64
NIS1	YNL078W	YFR016C	P43597	1233 aa	Known RBP	4.83	□□□□□ -1.64
NIS1	YNL078W	LRS4	Q04087	347 aa	Known RBP	4.83	□□□□□ -1.64
NIS1	YNL078W	TMA10	Q06177	86 aa		4.83	□□□□□ -1.64
NIS1	YNL078W	KCS1	Q12494	1050 aa		4.83	□□□□□ -1.64
NIS1	YNL078W	DAL7	P21826	554 aa		4.82	□□□□□ -1.64
NIS1	YNL078W	RAD53	P22216	821 aa		4.82	□□□□□ -1.64
NIS1	YNL078W	TYE7	P33122	291 aa	Predicted RBP	4.82	□□□□□ -1.64
NIS1	YNL078W	SPC29	P33419	253 aa		4.82	□□□□□ -1.64
NIS1	YNL078W	TAD1	P53065	400 aa		4.82	□□□□□ -1.64
NIS1	YNL078W	DAM1	P53267	343 aa		4.82	□□□□□ -1.64
NIS1	YNL078W	RNH70	P53331	553 aa		4.82	□□□□□ -1.64
NIS1	YNL078W	YLR125W	Q12138	136 aa		4.82	□□□□□ -1.64
NIS1	YNL078W	YPK9	Q12697	1472 aa		4.81	□□□□□ -1.64
NIS1	YNL078W	GEA1	P47102	1408 aa	Predicted RBP	4.81	□□□□□ -1.64
NIS1	YNL078W	SMC4	Q12267	1418 aa		4.81	□□□□□ -1.64
NIS1	YNL078W	CYS3	P31373	394 aa	Known RBP	4.81	□□□□□ -1.64
NIS1	YNL078W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 45.2 ms