RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	PBP1	P53297	722 aa	Known RBP	4.61	□□□□□ -1.67
YPT7	YML001W	HRQ1	Q05549	1077 aa		4.61	□□□□□ -1.67
YPT7	YML001W	RXT3	Q07458	294 aa		4.61	□□□□□ -1.67
YPT7	YML001W	HMI1	Q12039	706 aa		4.61	□□□□□ -1.67
YPT7	YML001W	YLL058W	Q12198	575 aa		4.61	□□□□□ -1.67
YPT7	YML001W	ABD1	P32783	436 aa	Predicted RBP	4.6	□□□□□ -1.67
YPT7	YML001W	FPR3	P38911	411 aa	Known RBP	4.6	□□□□□ -1.67
YPT7	YML001W	YAP6	Q03935	383 aa		4.6	□□□□□ -1.67
YPT7	YML001W	YDL144C	Q07589	356 aa		4.6	□□□□□ -1.67
YPT7	YML001W	STE11	P23561	717 aa		4.59	□□□□□ -1.67
YPT7	YML001W	AGP1	P25376	633 aa		4.59	□□□□□ -1.67
YPT7	YML001W	SBA1	P28707	216 aa	Known RBP	4.59	□□□□□ -1.67
YPT7	YML001W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
YPT7	YML001W	LST4	P34239	828 aa		4.59	□□□□□ -1.67
YPT7	YML001W	SHM2	P37291	469 aa	Known RBP	4.59	□□□□□ -1.67
YPT7	YML001W	YAP1801	P38856	637 aa		4.59	□□□□□ -1.67
YPT7	YML001W	SNF7	P39929	240 aa	Known RBP	4.59	□□□□□ -1.67
YPT7	YML001W	MND2	P40577	368 aa		4.59	□□□□□ -1.67
YPT7	YML001W	YRB30	P53107	440 aa	Predicted RBP	4.59	□□□□□ -1.67
YPT7	YML001W	SNU71	P53207	620 aa	Known RBP	4.59	□□□□□ -1.67
YPT7	YML001W	MDM38	Q08179	573 aa		4.59	□□□□□ -1.67
YPT7	YML001W	KRE5	P22023	1365 aa		4.58	□□□□□ -1.68
YPT7	YML001W	EMC1	P25574	760 aa		4.58	□□□□□ -1.68
YPT7	YML001W	GIC1	P38785	314 aa		4.58	□□□□□ -1.68
YPT7	YML001W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
YPT7	YML001W	MAD1	P40957	749 aa		4.58	□□□□□ -1.68
YPT7	YML001W	PAP2	P53632	584 aa	Known RBP	4.58	□□□□□ -1.68
YPT7	YML001W	RIA1	P53893	1110 aa		4.58	□□□□□ -1.68
YPT7	YML001W	ADY3	Q07732	790 aa		4.58	□□□□□ -1.68
YPT7	YML001W	FAL1	Q12099	399 aa	Known RBP	4.58	□□□□□ -1.68
YPT7	YML001W	RVB2	Q12464	471 aa	Known RBP	4.58	□□□□□ -1.68
YPT7	YML001W	MPP10	P47083	593 aa	Known RBP	4.57	□□□□□ -1.68
YPT7	YML001W	GTF1	P53260	183 aa	Predicted RBP	4.57	□□□□□ -1.68
YPT7	YML001W	SRT1	Q03175	343 aa		4.57	□□□□□ -1.68
YPT7	YML001W	TMA10	Q06177	86 aa		4.57	□□□□□ -1.68
YPT7	YML001W	TPO1	Q07824	586 aa		4.57	□□□□□ -1.68
YPT7	YML001W	CDC45	Q08032	650 aa		4.57	□□□□□ -1.68
YPT7	YML001W	NOP12	Q08208	459 aa	Known RBP	4.57	□□□□□ -1.68
YPT7	YML001W	SNF2	P22082	1703 aa		4.57	□□□□□ -1.68
YPT7	YML001W	BCK1	Q01389	1478 aa		4.56	□□□□□ -1.68
YPT7	YML001W	FUN30	P31380	1131 aa		4.56	□□□□□ -1.68
YPT7	YML001W	CDC12	P32468	407 aa	Known RBP	4.56	□□□□□ -1.68
YPT7	YML001W	YKL069W	P36088	180 aa		4.56	□□□□□ -1.68
YPT7	YML001W	NPP2	P39997	493 aa		4.56	□□□□□ -1.68
YPT7	YML001W	VPS27	P40343	622 aa	Known RBP	4.56	□□□□□ -1.68
YPT7	YML001W	KRI1	P42846	591 aa	Known RBP	4.56	□□□□□ -1.68
YPT7	YML001W	GCV2	P49095	1034 aa		4.56	□□□□□ -1.68
YPT7	YML001W	YLR224W	Q05947	369 aa		4.56	□□□□□ -1.68
YPT7	YML001W	JIP5	Q06214	492 aa	Predicted RBP	4.56	□□□□□ -1.68
YPT7	YML001W	CDA1	Q06702	301 aa		4.56	□□□□□ -1.68
YPT7	YML001W	OPI10	Q08202	246 aa		4.56	□□□□□ -1.68
YPT7	YML001W	OSW2	Q12202	724 aa		4.56	□□□□□ -1.68
YPT7	YML001W	BNI1	P41832	1953 aa		4.56	□□□□□ -1.68
YPT7	YML001W	MBP1	P39678	833 aa		4.55	□□□□□ -1.68
YPT7	YML001W	ZRG8	P40021	1076 aa		4.55	□□□□□ -1.68
YPT7	YML001W	RTR1	P40084	226 aa	Predicted RBP	4.55	□□□□□ -1.68
YPT7	YML001W	MET12	P46151	657 aa		4.55	□□□□□ -1.68
YPT7	YML001W	SHE9	Q04172	456 aa		4.55	□□□□□ -1.68
YPT7	YML001W	GSF2	Q04697	403 aa	Known RBP	4.55	□□□□□ -1.68
YPT7	YML001W	YEF3	P16521	1044 aa	Known RBP	4.54	□□□□□ -1.68
YPT7	YML001W	SUI2	P20459	304 aa	Known RBP	4.54	□□□□□ -1.68
YPT7	YML001W	VBA5	P36172	582 aa		4.54	□□□□□ -1.68
YPT7	YML001W	ECM21	P38167	1117 aa	Known RBP	4.54	□□□□□ -1.68
YPT7	YML001W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
YPT7	YML001W	MNN10	P50108	393 aa	Known RBP	4.54	□□□□□ -1.68
YPT7	YML001W	CWC24	P53769	259 aa		4.54	□□□□□ -1.68
YPT7	YML001W	HIS5	P07172	385 aa		4.53	□□□□□ -1.68
YPT7	YML001W	DAL5	P15365	543 aa		4.53	□□□□□ -1.68
YPT7	YML001W	POA1	P38218	177 aa		4.53	□□□□□ -1.68
YPT7	YML001W	YFR016C	P43597	1233 aa	Known RBP	4.53	□□□□□ -1.68
YPT7	YML001W	MCM6	P53091	1017 aa	Known RBP	4.53	□□□□□ -1.68
YPT7	YML001W	YGR012W	P53206	393 aa		4.53	□□□□□ -1.68
YPT7	YML001W	TUB2	P02557	457 aa	Known RBP	4.52	□□□□□ -1.69
YPT7	YML001W	RPP0	P05317	312 aa	Known RBP	4.52	□□□□□ -1.69
YPT7	YML001W	SPE1	P08432	466 aa		4.52	□□□□□ -1.69
YPT7	YML001W	ENA1	P13587	1091 aa		4.52	□□□□□ -1.69
YPT7	YML001W	HCM1	P25364	564 aa		4.52	□□□□□ -1.69
YPT7	YML001W	PPH3	P32345	308 aa		4.52	□□□□□ -1.69
YPT7	YML001W	SRP101	P32916	621 aa		4.52	□□□□□ -1.69
YPT7	YML001W	PAM1	P37304	830 aa	Known RBP	4.52	□□□□□ -1.69
YPT7	YML001W	SAH1	P39954	449 aa	Known RBP	4.52	□□□□□ -1.69
YPT7	YML001W	CHA4	P43634	648 aa		4.52	□□□□□ -1.69
YPT7	YML001W	ENA2	Q01896	1091 aa		4.52	□□□□□ -1.69
YPT7	YML001W	ENA5	Q12691	1091 aa		4.52	□□□□□ -1.69
YPT7	YML001W	PMA1	P05030	918 aa	Known RBP	4.51	□□□□□ -1.69
YPT7	YML001W	PRI2	P20457	528 aa		4.51	□□□□□ -1.69
YPT7	YML001W	RPC82	P32349	654 aa		4.51	□□□□□ -1.69
YPT7	YML001W	DCG1	P32460	244 aa		4.51	□□□□□ -1.69
YPT7	YML001W	PLB1	P39105	664 aa		4.51	□□□□□ -1.69
YPT7	YML001W	GYP7	P48365	746 aa		4.51	□□□□□ -1.69
YPT7	YML001W	ALD6	P54115	500 aa	Known RBP	4.51	□□□□□ -1.69
YPT7	YML001W	SRP1	Q02821	542 aa	Known RBP	4.51	□□□□□ -1.69
YPT7	YML001W	DUS3	Q06053	668 aa	Known RBP	4.51	□□□□□ -1.69
YPT7	YML001W	HIM1	Q06674	414 aa		4.51	□□□□□ -1.69
YPT7	YML001W	NTO1	Q12311	748 aa		4.51	□□□□□ -1.69
YPT7	YML001W	YML133C	Q03099	1374 aa		4.51	□□□□□ -1.69
YPT7	YML001W	YLL067C	Q07888	1374 aa		4.51	□□□□□ -1.69
YPT7	YML001W	YLL066C	Q99208	1374 aa		4.51	□□□□□ -1.69
YPT7	YML001W	DNF3	Q12674	1656 aa		4.51	□□□□□ -1.69
YPT7	YML001W	RPP2A	P05319	106 aa	Known RBP	4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms