RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C KXD1P53158 218 aa5.34□□□□□ -1.55
SEC39YLR440C RET3P53600 189 aa5.34□□□□□ -1.55
SEC39YLR440C YML108WQ03759 105 aa5.34□□□□□ -1.55
SEC39YLR440C INP2Q03824 705 aa5.34□□□□□ -1.55
SEC39YLR440C SGD1Q06132 899 aa5.34□□□□□ -1.55
SEC39YLR440C STB3Q12427 513 aa5.34□□□□□ -1.55
SEC39YLR440C CTT1P06115 562 aa5.33□□□□□ -1.56
SEC39YLR440C SSC1P0CS90 654 aaKnown RBP5.33□□□□□ -1.56
SEC39YLR440C CKA2P19454 339 aa5.33□□□□□ -1.56
SEC39YLR440C MAK11P20484 414 aaKnown RBP5.33□□□□□ -1.56
SEC39YLR440C MET4P32389 672 aa5.33□□□□□ -1.56
SEC39YLR440C NIP1P32497 812 aaKnown RBP5.33□□□□□ -1.56
SEC39YLR440C SRB4P32569 687 aa5.33□□□□□ -1.56
SEC39YLR440C UBC6P33296 250 aaPredicted RBP5.33□□□□□ -1.56
SEC39YLR440C TMA108P40462 946 aa5.33□□□□□ -1.56
SEC39YLR440C EMP47P43555 445 aa5.33□□□□□ -1.56
SEC39YLR440C EPL1P43572 832 aa5.33□□□□□ -1.56
SEC39YLR440C YJL181WP46987 611 aa5.33□□□□□ -1.56
SEC39YLR440C MPS2P53159 387 aa5.33□□□□□ -1.56
SEC39YLR440C IPI3P53877 555 aa5.33□□□□□ -1.56
SEC39YLR440C UBX4P54730 416 aa5.33□□□□□ -1.56
SEC39YLR440C MUB1Q03162 620 aa5.33□□□□□ -1.56
SEC39YLR440C LCD1Q04377 747 aa5.33□□□□□ -1.56
SEC39YLR440C RSC58Q07979 502 aa5.33□□□□□ -1.56
SEC39YLR440C TRM8Q12009 286 aa5.33□□□□□ -1.56
SEC39YLR440C MED1Q12321 566 aa5.33□□□□□ -1.56
SEC39YLR440C SEC14P24280 304 aaKnown RBP5.33□□□□□ -1.56
SEC39YLR440C VPH2P32341 215 aa5.33□□□□□ -1.56
SEC39YLR440C DPH2P32461 534 aa5.33□□□□□ -1.56
SEC39YLR440C MRS6P32864 603 aaKnown RBP5.33□□□□□ -1.56
SEC39YLR440C DUR3P33413 735 aa5.33□□□□□ -1.56
SEC39YLR440C STE13P33894 931 aa5.33□□□□□ -1.56
SEC39YLR440C PEX32P38292 413 aa5.33□□□□□ -1.56
SEC39YLR440C LRP1P38801 184 aaKnown RBP5.33□□□□□ -1.56
SEC39YLR440C VPS8P39702 1274 aa5.33□□□□□ -1.56
SEC39YLR440C JEM1P40358 645 aa5.33□□□□□ -1.56
SEC39YLR440C RPL34BP40525 121 aaKnown RBP5.33□□□□□ -1.56
SEC39YLR440C URB2P47108 1174 aa5.33□□□□□ -1.56
SEC39YLR440C SGM1P47166 707 aa5.33□□□□□ -1.56
SEC39YLR440C UBA2P52488 636 aa5.33□□□□□ -1.56
SEC39YLR440C YNL193WP53870 558 aa5.33□□□□□ -1.56
SEC39YLR440C KRE28Q04431 385 aa5.33□□□□□ -1.56
SEC39YLR440C YKU80Q04437 629 aa5.33□□□□□ -1.56
SEC39YLR440C MED4Q12343 284 aa5.33□□□□□ -1.56
SEC39YLR440C TIF1P10081 395 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C STE6P12866 1290 aa5.32□□□□□ -1.56
SEC39YLR440C YAP1P19880 650 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C SRM1P21827 482 aa5.32□□□□□ -1.56
SEC39YLR440C RPC53P25441 422 aa5.32□□□□□ -1.56
SEC39YLR440C MCM2P29469 868 aa5.32□□□□□ -1.56
SEC39YLR440C IMP2'P32351 346 aa5.32□□□□□ -1.56
SEC39YLR440C DAL1P32375 460 aa5.32□□□□□ -1.56
SEC39YLR440C FBP26P32604 452 aa5.32□□□□□ -1.56
SEC39YLR440C MRP4P32902 394 aa5.32□□□□□ -1.56
SEC39YLR440C WHI3P34761 661 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C CSE4P36012 229 aa5.32□□□□□ -1.56
SEC39YLR440C TRZ1P36159 838 aaPredicted RBP5.32□□□□□ -1.56
SEC39YLR440C STV1P37296 890 aa5.32□□□□□ -1.56
SEC39YLR440C MBP1P39678 833 aa5.32□□□□□ -1.56
SEC39YLR440C GPD2P41911 440 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C SSN8P47821 323 aa5.32□□□□□ -1.56
SEC39YLR440C YML6P51998 286 aa5.32□□□□□ -1.56
SEC39YLR440C ALD6P54115 500 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C YLR271WQ06152 274 aa5.32□□□□□ -1.56
SEC39YLR440C BUD7Q08754 746 aa5.32□□□□□ -1.56
SEC39YLR440C REX3Q12090 404 aa5.32□□□□□ -1.56
SEC39YLR440C CHS5Q12114 671 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C DIT2P21595 489 aa5.32□□□□□ -1.56
SEC39YLR440C NAM7P30771 971 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C PEP7P32609 515 aa5.32□□□□□ -1.56
SEC39YLR440C VPS35P34110 944 aa5.32□□□□□ -1.56
SEC39YLR440C CUE2P36075 443 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C SBE2P42223 864 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C MDV1P47025 714 aa5.32□□□□□ -1.56
SEC39YLR440C COP1P53622 1201 aaKnown RBP5.32□□□□□ -1.56
SEC39YLR440C NIS1P53939 407 aa5.32□□□□□ -1.56
SEC39YLR440C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
SEC39YLR440C ACF2Q12168 779 aa5.32□□□□□ -1.56
SEC39YLR440C YBL113CQ7M4S9 792 aa5.32□□□□□ -1.56
SEC39YLR440C FKS3Q04952 1785 aa5.31□□□□□ -1.56
SEC39YLR440C LEU2P04173 364 aaPredicted RBP5.31□□□□□ -1.56
SEC39YLR440C CDC37P06101 506 aaKnown RBP5.31□□□□□ -1.56
SEC39YLR440C SES1P07284 462 aaKnown RBP5.31□□□□□ -1.56
SEC39YLR440C RPS24AP0CX31 135 aaKnown RBP5.31□□□□□ -1.56
SEC39YLR440C RPS24BP0CX32 135 aaKnown RBP5.31□□□□□ -1.56
SEC39YLR440C PUT4P15380 627 aa5.31□□□□□ -1.56
SEC39YLR440C PRP6P19735 899 aaPredicted RBP5.31□□□□□ -1.56
SEC39YLR440C HSP60P19882 572 aaKnown RBP5.31□□□□□ -1.56
SEC39YLR440C MRPL8P22353 238 aa5.31□□□□□ -1.56
SEC39YLR440C PRP22P24384 1145 aaKnown RBP5.31□□□□□ -1.56
SEC39YLR440C NPP1P25353 742 aa5.31□□□□□ -1.56
SEC39YLR440C MEI4P29467 408 aa5.31□□□□□ -1.56
SEC39YLR440C GUT1P32190 709 aa5.31□□□□□ -1.56
SEC39YLR440C MGM1P32266 881 aa5.31□□□□□ -1.56
SEC39YLR440C PPQ1P32945 549 aa5.31□□□□□ -1.56
SEC39YLR440C PRP40P33203 583 aaKnown RBP5.31□□□□□ -1.56
SEC39YLR440C DOM34P33309 386 aa5.31□□□□□ -1.56
SEC39YLR440C HCS1P34243 683 aa5.31□□□□□ -1.56
SEC39YLR440C VPS51P36116 164 aa5.31□□□□□ -1.56
SEC39YLR440C NEO1P40527 1151 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 69.1 ms