RNA–Protein interactions for RNA: YKL046C

DCW1, Transcript of Putative mannosidase, yeast

Gene DCW1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DCW1	YKL046C	YER189W	P40104	122 aa		13.35	□□□□□ -0.27
DCW1	YKL046C	YFL064C	P43540	174 aa		13.35	□□□□□ -0.27
DCW1	YKL046C	ALD6	P54115	500 aa	Known RBP	13.35	□□□□□ -0.27
DCW1	YKL046C	YML082W	Q04533	649 aa	Known RBP	13.35	□□□□□ -0.27
DCW1	YKL046C	YLR326W	Q06170	240 aa	Known RBP	13.35	□□□□□ -0.27
DCW1	YKL046C	CUR1	Q06469	252 aa		13.35	□□□□□ -0.27
DCW1	YKL046C	RLP24	Q07915	199 aa	Known RBP	13.35	□□□□□ -0.27
DCW1	YKL046C	YBL111C	Q3E7Y5	667 aa		13.35	□□□□□ -0.27
DCW1	YKL046C	CDC10	P25342	322 aa	Known RBP	13.34	□□□□□ -0.27
DCW1	YKL046C	SUV3	P32580	737 aa		13.34	□□□□□ -0.27
DCW1	YKL046C	KAP123	P40069	1113 aa	Known RBP	13.34	□□□□□ -0.27
DCW1	YKL046C	SMX2	P40204	77 aa	Known RBP	13.34	□□□□□ -0.27
DCW1	YKL046C	SAP185	P40856	1058 aa		13.34	□□□□□ -0.27
DCW1	YKL046C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	13.34	□□□□□ -0.27	not detected
DCW1	YKL046C	SOL4	P53315	255 aa		13.34	□□□□□ -0.27
DCW1	YKL046C	JJJ1	P53863	590 aa		13.34	□□□□□ -0.27
DCW1	YKL046C	CRF1	Q04930	467 aa		13.34	□□□□□ -0.27
DCW1	YKL046C	PNP1	Q05788	311 aa		13.34	□□□□□ -0.27
DCW1	YKL046C	SWI6	P09959	803 aa		13.33	□□□□□ -0.27
DCW1	YKL046C	CHS2	P14180	963 aa		13.33	□□□□□ -0.27
DCW1	YKL046C	YCR051W	P25631	222 aa		13.33	□□□□□ -0.27
DCW1	YKL046C	GCD6	P32501	712 aa	Known RBP	13.33	□□□□□ -0.27
DCW1	YKL046C	MMS21	P38632	267 aa		13.33	□□□□□ -0.27
DCW1	YKL046C	RPN3	P40016	523 aa	Known RBP	13.33	□□□□□ -0.27
DCW1	YKL046C	URB2	P47108	1174 aa		13.33	□□□□□ -0.27
DCW1	YKL046C	ENV11	P53246	860 aa		13.33	□□□□□ -0.27
DCW1	YKL046C	TIM8	P57744	87 aa		13.33	□□□□□ -0.27
DCW1	YKL046C	SEN54	Q02825	467 aa	Predicted RBP	13.33	□□□□□ -0.27
DCW1	YKL046C	PMR1	P13586	950 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	PHO88	P38264	188 aa	Predicted RBP	13.32	□□□□□ -0.28
DCW1	YKL046C	EXO5	P38289	585 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	RRT2	P38332	387 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	HIS2	P38635	335 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	SPT2	P06843	333 aa	Predicted RBP	13.32	□□□□□ -0.28
DCW1	YKL046C	ILV6	P25605	309 aa	Known RBP	13.32	□□□□□ -0.28
DCW1	YKL046C	CAP1	P28495	268 aa	Known RBP	13.32	□□□□□ -0.28
DCW1	YKL046C	PSE1	P32337	1089 aa	Known RBP	13.32	□□□□□ -0.28
DCW1	YKL046C	UBP13	P38187	747 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	SHC1	P39000	512 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	FIS1	P40515	155 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	ATG36	P46983	293 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	VPS70	P47161	811 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	CNM67	P53865	581 aa	Known RBP	13.32	□□□□□ -0.28
DCW1	YKL046C	TAF9	Q05027	157 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	YDL206W	Q12424	762 aa		13.32	□□□□□ -0.28
DCW1	YKL046C	ADH4	P10127	382 aa		13.31	□□□□□ -0.28
DCW1	YKL046C	KIP1	P28742	1111 aa		13.31	□□□□□ -0.28
DCW1	YKL046C	PLC1	P32383	869 aa		13.31	□□□□□ -0.28
DCW1	YKL046C	CDC11	P32458	415 aa		13.31	□□□□□ -0.28
DCW1	YKL046C	ECM2	P38241	364 aa	Known RBP	13.31	□□□□□ -0.28
DCW1	YKL046C	LIF1	P53150	421 aa		13.31	□□□□□ -0.28
DCW1	YKL046C	UTP6	Q02354	440 aa	Known RBP	13.31	□□□□□ -0.28
DCW1	YKL046C	MTG1	Q03151	367 aa	Predicted RBP	13.31	□□□□□ -0.28
DCW1	YKL046C	TMA64	Q04600	565 aa	Known RBP	13.31	□□□□□ -0.28
DCW1	YKL046C	FRA1	Q07825	749 aa		13.31	□□□□□ -0.28
DCW1	YKL046C	SNF1	P06782	633 aa	Known RBP	13.3	□□□□□ -0.28
DCW1	YKL046C	PDB1	P32473	366 aa	Known RBP	13.3	□□□□□ -0.28
DCW1	YKL046C	YSC83	P32792	385 aa		13.3	□□□□□ -0.28
DCW1	YKL046C	LOS1	P33418	1100 aa	Predicted RBP	13.3	□□□□□ -0.28
DCW1	YKL046C	VPS35	P34110	944 aa		13.3	□□□□□ -0.28
DCW1	YKL046C	SAK1	P38990	1142 aa		13.3	□□□□□ -0.28
DCW1	YKL046C	PSY2	P40164	858 aa		13.3	□□□□□ -0.28
DCW1	YKL046C	CTR1	P49573	406 aa		13.3	□□□□□ -0.28
DCW1	YKL046C	NCS2	P53923	493 aa	Predicted RBP	13.3	□□□□□ -0.28
DCW1	YKL046C	ADA2	Q02336	434 aa		13.3	□□□□□ -0.28
DCW1	YKL046C	PHM6	Q05637	104 aa		13.3	□□□□□ -0.28
DCW1	YKL046C	PGK1	P00560	416 aa	Known RBP	13.29	□□□□□ -0.28
DCW1	YKL046C	ERG12	P07277	443 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	RPB2	P08518	1224 aa	Known RBP	13.29	□□□□□ -0.28
DCW1	YKL046C	KAR3	P17119	729 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	ARG1	P22768	420 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	SEC21	P32074	935 aa	Known RBP	13.29	□□□□□ -0.28
DCW1	YKL046C	YME1	P32795	747 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	SWE1	P32944	819 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	TIF5	P38431	405 aa	Known RBP	13.29	□□□□□ -0.28
DCW1	YKL046C	ERC1	P38767	581 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	YGL039W	P53183	348 aa	Known RBP	13.29	□□□□□ -0.28
DCW1	YKL046C	DON1	Q05610	365 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	SLX4	Q12098	748 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	NCA2	Q12374	616 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	SEY1	Q99287	776 aa		13.29	□□□□□ -0.28
DCW1	YKL046C	RAD18	P10862	487 aa		13.28	□□□□□ -0.28
DCW1	YKL046C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	13.28	□□□□□ -0.28	not detected
DCW1	YKL046C	NCL1	P38205	684 aa	Known RBP	13.28	□□□□□ -0.28
DCW1	YKL046C	END3	P39013	349 aa		13.28	□□□□□ -0.28
DCW1	YKL046C	ZPR1	P53303	486 aa	Known RBP	13.28	□□□□□ -0.28
DCW1	YKL046C	CPR6	P53691	371 aa	Known RBP	13.28	□□□□□ -0.28
DCW1	YKL046C	TRM44	Q02648	567 aa	Known RBP	13.28	□□□□□ -0.28
DCW1	YKL046C	MPC54	Q08550	464 aa		13.28	□□□□□ -0.28
DCW1	YKL046C	ACM1	Q08981	209 aa		13.28	□□□□□ -0.28
DCW1	YKL046C	RKM4	Q12504	494 aa		13.28	□□□□□ -0.28
DCW1	YKL046C	TCP1	P12612	559 aa	Known RBP	13.27	□□□□□ -0.29
DCW1	YKL046C	PEP5	P12868	1029 aa		13.27	□□□□□ -0.29
DCW1	YKL046C	GPI10	P30777	616 aa		13.27	□□□□□ -0.29
DCW1	YKL046C	EUG1	P32474	517 aa		13.27	□□□□□ -0.29
DCW1	YKL046C	TGL1	P34163	548 aa		13.27	□□□□□ -0.29
DCW1	YKL046C	YBR062C	P38239	180 aa		13.27	□□□□□ -0.29
DCW1	YKL046C	YER156C	P40093	338 aa	Known RBP	13.27	□□□□□ -0.29
DCW1	YKL046C	HIF1	Q12373	385 aa		13.27	□□□□□ -0.29
DCW1	YKL046C	CDC33	P07260	213 aa	Known RBP	13.26	□□□□□ -0.29

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms