RNA–Protein interactions for RNA: YJR140C

HIR3, Transcript of Subunit of the HIR complex, yeastyeast

Gene HIR3, Length 4,947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIR3YJR140C MRP10O75012 95 aa2.08□□□□□ -2.08
HIR3YJR140C SFL1P20134 766 aa2.08□□□□□ -2.08
HIR3YJR140C TSL1P38427 1098 aaKnown RBP2.08□□□□□ -2.08
HIR3YJR140C RAI1P53063 387 aaKnown RBP2.08□□□□□ -2.08
HIR3YJR140C PEX14P53112 341 aa2.08□□□□□ -2.08
HIR3YJR140C PPN1Q04119 674 aa2.08□□□□□ -2.08
HIR3YJR140C MLC2Q06580 163 aa2.08□□□□□ -2.08
HIR3YJR140C PTP2P29461 750 aa2.08□□□□□ -2.08
HIR3YJR140C PRP19P32523 503 aaKnown RBP2.08□□□□□ -2.08
HIR3YJR140C YBR284WP38150 797 aa2.08□□□□□ -2.08
HIR3YJR140C SAF1P38352 637 aa2.08□□□□□ -2.08
HIR3YJR140C YGR153WP48238 217 aa2.08□□□□□ -2.08
HIR3YJR140C UBX4P54730 416 aa2.08□□□□□ -2.08
HIR3YJR140C SKY1Q03656 742 aa2.08□□□□□ -2.08
HIR3YJR140C HRQ1Q05549 1077 aa2.08□□□□□ -2.08
HIR3YJR140C PEX15Q08215 383 aa2.08□□□□□ -2.08
HIR3YJR140C ACE2P21192 770 aa2.08□□□□□ -2.08
HIR3YJR140C ADP1P25371 1049 aa2.08□□□□□ -2.08
HIR3YJR140C URA1P28272 314 aaPredicted RBP2.08□□□□□ -2.08
HIR3YJR140C TYE7P33122 291 aaPredicted RBP2.08□□□□□ -2.08
HIR3YJR140C VPS27P40343 622 aaKnown RBP2.08□□□□□ -2.08
HIR3YJR140C NIT1P40447 199 aa2.08□□□□□ -2.08
HIR3YJR140C MAL11P53048 616 aa2.08□□□□□ -2.08
HIR3YJR140C BUL2Q03758 920 aaKnown RBP2.08□□□□□ -2.08
HIR3YJR140C MTQ2Q03920 221 aaPredicted RBP2.08□□□□□ -2.08
HIR3YJR140C CDC9P04819 755 aa2.08□□□□□ -2.08
HIR3YJR140C RAD18P10862 487 aa2.08□□□□□ -2.08
HIR3YJR140C MFT1P33441 392 aaKnown RBP2.08□□□□□ -2.08
HIR3YJR140C YAP1801P38856 637 aa2.08□□□□□ -2.08
HIR3YJR140C PEX8P53248 589 aa2.08□□□□□ -2.08
HIR3YJR140C YVC1Q12324 675 aa2.08□□□□□ -2.08
HIR3YJR140C NKP1Q12493 238 aa2.08□□□□□ -2.08
HIR3YJR140C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
HIR3YJR140C NAM7P30771 971 aaKnown RBP2.07□□□□□ -2.08
HIR3YJR140C GPB2P39717 880 aa2.07□□□□□ -2.08
HIR3YJR140C SBE2P42223 864 aaKnown RBP2.07□□□□□ -2.08
HIR3YJR140C BNA2P47125 453 aa2.07□□□□□ -2.08
HIR3YJR140C NPY1P53164 384 aa2.07□□□□□ -2.08
HIR3YJR140C BUD9P53226 547 aa2.07□□□□□ -2.08
HIR3YJR140C ATG16Q03818 150 aa2.07□□□□□ -2.08
HIR3YJR140C OPY2Q06810 360 aa2.07□□□□□ -2.08
HIR3YJR140C KCS1Q12494 1050 aa2.07□□□□□ -2.08
HIR3YJR140C BI4P03879 638 aa2.07□□□□□ -2.08
HIR3YJR140C TAT1P38085 619 aa2.07□□□□□ -2.08
HIR3YJR140C GIC1P38785 314 aa2.07□□□□□ -2.08
HIR3YJR140C YBP2P53169 641 aa2.07□□□□□ -2.08
HIR3YJR140C ORC4P54791 529 aa2.07□□□□□ -2.08
HIR3YJR140C TRE1Q08919 783 aa2.07□□□□□ -2.08
HIR3YJR140C CHS2P14180 963 aa2.07□□□□□ -2.08
HIR3YJR140C YEF3P16521 1044 aaKnown RBP2.07□□□□□ -2.08
HIR3YJR140C PCL2P25693 308 aa2.07□□□□□ -2.08
HIR3YJR140C APL1P27351 700 aa2.07□□□□□ -2.08
HIR3YJR140C PPE1P38796 400 aa2.07□□□□□ -2.08
HIR3YJR140C MXR1P40029 184 aa2.07□□□□□ -2.08
HIR3YJR140C CCT5P40413 562 aaKnown RBP2.07□□□□□ -2.08
HIR3YJR140C SPC105P53148 917 aa2.07□□□□□ -2.08
HIR3YJR140C ATG33Q06485 197 aa2.07□□□□□ -2.08
HIR3YJR140C CLF1Q12309 687 aaPredicted RBP2.07□□□□□ -2.08
HIR3YJR140C PRC1P00729 532 aa2.07□□□□□ -2.08
HIR3YJR140C TOP3P13099 656 aa2.07□□□□□ -2.08
HIR3YJR140C ECM21P38167 1117 aaKnown RBP2.07□□□□□ -2.08
HIR3YJR140C YRB30P53107 440 aaPredicted RBP2.07□□□□□ -2.08
HIR3YJR140C MET13P53128 600 aa2.07□□□□□ -2.08
HIR3YJR140C PHM6Q05637 104 aa2.07□□□□□ -2.08
HIR3YJR140C NOT3P06102 836 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C SST2P11972 698 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C MEF1P25039 761 aa2.06□□□□□ -2.08
HIR3YJR140C CYS3P31373 394 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C EUG1P32474 517 aa2.06□□□□□ -2.08
HIR3YJR140C STE13P33894 931 aa2.06□□□□□ -2.08
HIR3YJR140C NIC96P34077 839 aa2.06□□□□□ -2.08
HIR3YJR140C KAE1P36132 386 aa2.06□□□□□ -2.08
HIR3YJR140C ECM1P39715 212 aa2.06□□□□□ -2.08
HIR3YJR140C SAW1P39735 261 aa2.06□□□□□ -2.08
HIR3YJR140C YJR096WP47137 282 aa2.06□□□□□ -2.08
HIR3YJR140C FOL1P53848 824 aa2.06□□□□□ -2.08
HIR3YJR140C GAR1P28007 205 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C MCD4P36051 919 aa2.06□□□□□ -2.08
HIR3YJR140C OAF1P39720 1047 aaPredicted RBP2.06□□□□□ -2.08
HIR3YJR140C NIT2P47016 307 aa2.06□□□□□ -2.08
HIR3YJR140C COG6P53959 839 aa2.06□□□□□ -2.08
HIR3YJR140C YKR011CQ02209 353 aa2.06□□□□□ -2.08
HIR3YJR140C NPP1P25353 742 aa2.06□□□□□ -2.08
HIR3YJR140C MRPL36P36531 177 aa2.06□□□□□ -2.08
HIR3YJR140C CCT3P39077 534 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C ORC3P54790 616 aa2.06□□□□□ -2.08
HIR3YJR140C HPF1Q05164 967 aa2.06□□□□□ -2.08
HIR3YJR140C YPR027CQ12079 277 aa2.06□□□□□ -2.08
HIR3YJR140C YPR053CQ6Q5F3 151 aa2.06□□□□□ -2.08
HIR3YJR140C TUF1P02992 437 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C SAM35P14693 329 aa2.06□□□□□ -2.08
HIR3YJR140C DAL7P21826 554 aa2.06□□□□□ -2.08
HIR3YJR140C POA1P38218 177 aa2.06□□□□□ -2.08
HIR3YJR140C GPP1P41277 250 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C RPN7Q06103 429 aaKnown RBP2.06□□□□□ -2.08
HIR3YJR140C PRP22P24384 1145 aaKnown RBP2.05□□□□□ -2.08
HIR3YJR140C RPT3P33298 428 aaKnown RBP2.05□□□□□ -2.08
HIR3YJR140C YKR018CP36114 725 aa2.05□□□□□ -2.08
HIR3YJR140C SNO2P53823 222 aa2.05□□□□□ -2.08
HIR3YJR140C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08 RIP-Chip
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms