RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeastyeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APL1YJR005W HDA1P53973 706 aa1.9□□□□□ -2.11
APL1YJR005W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11not detected
APL1YJR005W SVF1Q05515 481 aa1.9□□□□□ -2.11
APL1YJR005W SSF2Q12153 453 aaPredicted RBP1.9□□□□□ -2.11
APL1YJR005W RPP2AP05319 106 aaKnown RBP1.89□□□□□ -2.11
APL1YJR005W TRP4P07285 380 aaPredicted RBP1.89□□□□□ -2.11
APL1YJR005W OAR1P35731 278 aa1.89□□□□□ -2.11
APL1YJR005W STB4P50104 949 aa1.89□□□□□ -2.11
APL1YJR005W FMP25Q08023 583 aa1.89□□□□□ -2.11
APL1YJR005W GUP2Q08929 609 aa1.89□□□□□ -2.11
APL1YJR005W MSD1P15179 658 aaKnown RBP1.88□□□□□ -2.11
APL1YJR005W URA1P28272 314 aaPredicted RBP1.88□□□□□ -2.11
APL1YJR005W SDP1P40479 209 aa1.88□□□□□ -2.11
APL1YJR005W KRI1P42846 591 aaKnown RBP1.88□□□□□ -2.11
APL1YJR005W YKR011CQ02209 353 aa1.88□□□□□ -2.11
APL1YJR005W LCD1Q04377 747 aa1.88□□□□□ -2.11
APL1YJR005W PEX19Q07418 342 aa1.88□□□□□ -2.11
APL1YJR005W RFA1P22336 621 aaKnown RBP1.88□□□□□ -2.11
APL1YJR005W NAP1P25293 417 aaKnown RBP1.88□□□□□ -2.11
APL1YJR005W RPL8BP29453 256 aaKnown RBP1.88□□□□□ -2.11
APL1YJR005W TYE7P33122 291 aaPredicted RBP1.88□□□□□ -2.11
APL1YJR005W REC104P33323 182 aa1.88□□□□□ -2.11
APL1YJR005W TMN2Q04562 672 aa1.88□□□□□ -2.11
APL1YJR005W ENV7Q12003 364 aa1.88□□□□□ -2.11
APL1YJR005W HAL9Q12180 1030 aa1.88□□□□□ -2.11
APL1YJR005W HBN1Q96VH4 193 aa1.88□□□□□ -2.11
APL1YJR005W ALG7P07286 448 aa1.87□□□□□ -2.11
APL1YJR005W PRP9P19736 530 aaKnown RBP1.87□□□□□ -2.11
APL1YJR005W CTF13P35203 478 aa1.87□□□□□ -2.11
APL1YJR005W KTR4P38131 464 aa1.87□□□□□ -2.11
APL1YJR005W CTF8P38877 133 aa1.87□□□□□ -2.11
APL1YJR005W UBA2P52488 636 aa1.87□□□□□ -2.11
APL1YJR005W SNU71P53207 620 aaKnown RBP1.87□□□□□ -2.11
APL1YJR005W RNT1Q02555 471 aa1.87□□□□□ -2.11
APL1YJR005W EAF1Q06337 982 aa1.87□□□□□ -2.11
APL1YJR005W YCL002CP25565 263 aa1.87□□□□□ -2.11
APL1YJR005W PET10P36139 283 aa1.87□□□□□ -2.11
APL1YJR005W VHR1P40522 640 aa1.87□□□□□ -2.11
APL1YJR005W CCM1P48237 864 aaPredicted RBP1.87□□□□□ -2.11
APL1YJR005W UTP8P53276 713 aaKnown RBP1.87□□□□□ -2.11
APL1YJR005W URN1Q06525 465 aaKnown RBP1.87□□□□□ -2.11
APL1YJR005W MCH5Q08777 521 aa1.87□□□□□ -2.11
APL1YJR005W PPR1P07272 904 aaPredicted RBP1.86□□□□□ -2.11
APL1YJR005W RAD4P14736 754 aa1.86□□□□□ -2.11
APL1YJR005W ARE1P25628 610 aa1.86□□□□□ -2.11
APL1YJR005W PPS1P38148 807 aa1.86□□□□□ -2.11
APL1YJR005W RPP1P38786 293 aa1.86□□□□□ -2.11
APL1YJR005W YHR078WP38799 552 aa1.86□□□□□ -2.11
APL1YJR005W FKH2P41813 862 aa1.86□□□□□ -2.11
APL1YJR005W LRS4Q04087 347 aaKnown RBP1.86□□□□□ -2.11
APL1YJR005W WRS1Q12109 432 aaKnown RBP1.86□□□□□ -2.11
APL1YJR005W RPS9AO13516 197 aaKnown RBP1.85□□□□□ -2.11
APL1YJR005W GGA2P38817 585 aaKnown RBP1.85□□□□□ -2.11
APL1YJR005W GYP8P43570 497 aa1.85□□□□□ -2.11
APL1YJR005W TPO2P53283 614 aa1.85□□□□□ -2.11
APL1YJR005W GND2P53319 492 aa1.85□□□□□ -2.11
APL1YJR005W DUS1P53759 423 aaKnown RBP1.85□□□□□ -2.11
APL1YJR005W NAN1Q02931 896 aaKnown RBP1.85□□□□□ -2.11
APL1YJR005W VPS30Q02948 557 aa1.85□□□□□ -2.11
APL1YJR005W OMS1Q06668 471 aa1.85□□□□□ -2.11
APL1YJR005W FRE5Q08908 694 aa1.85□□□□□ -2.11
APL1YJR005W YOR022CQ12204 715 aa1.85□□□□□ -2.11
APL1YJR005W SWM1Q12379 170 aa1.85□□□□□ -2.11
APL1YJR005W TRM11Q12463 433 aa1.85□□□□□ -2.11
APL1YJR005W MPH2P0CD99 609 aa1.85□□□□□ -2.11
APL1YJR005W DAL7P21826 554 aa1.85□□□□□ -2.11
APL1YJR005W CYS3P31373 394 aaKnown RBP1.85□□□□□ -2.11
APL1YJR005W MTH1P35198 433 aa1.85□□□□□ -2.11
APL1YJR005W BET3P36149 193 aa1.85□□□□□ -2.11
APL1YJR005W YHR020WP38708 688 aaKnown RBP1.85□□□□□ -2.11
APL1YJR005W ELO3P40319 345 aa1.85□□□□□ -2.11
APL1YJR005W MUP1P50276 574 aa1.85□□□□□ -2.11
APL1YJR005W TAD1P53065 400 aa1.85□□□□□ -2.11
APL1YJR005W PUS2P53167 370 aa1.85□□□□□ -2.11
APL1YJR005W ERP6P53198 216 aa1.85□□□□□ -2.11
APL1YJR005W ASM4Q05166 528 aa1.85□□□□□ -2.11
APL1YJR005W ACF2Q12168 779 aa1.85□□□□□ -2.11
APL1YJR005W YBR053CP38235 358 aa1.84□□□□□ -2.11
APL1YJR005W SAK1P38990 1142 aa1.84□□□□□ -2.11
APL1YJR005W QRI1P43123 477 aaKnown RBP1.84□□□□□ -2.11
APL1YJR005W TIM54P47045 478 aa1.84□□□□□ -2.11
APL1YJR005W YGR125WP53273 1036 aa1.84□□□□□ -2.11
APL1YJR005W MUS81Q04149 632 aaPredicted RBP1.84□□□□□ -2.11
APL1YJR005W DLT1Q04216 342 aa1.84□□□□□ -2.11
APL1YJR005W CDC11P32458 415 aa1.84□□□□□ -2.12
APL1YJR005W SPC42P36094 363 aa1.84□□□□□ -2.12
APL1YJR005W PFA3P42836 336 aa1.84□□□□□ -2.12
APL1YJR005W UBP6P43593 499 aaKnown RBP1.84□□□□□ -2.12
APL1YJR005W RTA1P53047 317 aa1.84□□□□□ -2.12
APL1YJR005W ASI2P53895 289 aa1.84□□□□□ -2.12
APL1YJR005W TAF8Q03750 510 aa1.84□□□□□ -2.12
APL1YJR005W SPO75Q07798 868 aa1.84□□□□□ -2.12
APL1YJR005W IRC10Q08118 586 aa1.84□□□□□ -2.12
APL1YJR005W SUT2Q12286 268 aa1.84□□□□□ -2.12
APL1YJR005W GPR1Q12361 961 aa1.84□□□□□ -2.12
APL1YJR005W PRC1P00729 532 aa1.83□□□□□ -2.12
APL1YJR005W CIT1P00890 479 aa1.83□□□□□ -2.12
APL1YJR005W MET3P08536 511 aa1.83□□□□□ -2.12
APL1YJR005W CAF20P12962 161 aaKnown RBP1.83□□□□□ -2.12
APL1YJR005W HSP60P19882 572 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 150.7 ms