RNA–Protein interactions for RNA: YGR213C

RTA1, Transcript of Protein involved in 7-aminocholesterol resistance, yeastyeast

Gene RTA1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTA1YGR213C UBP5P39944 805 aa5.28□□□□□ -1.56
RTA1YGR213C URM1P40554 99 aaPredicted RBP5.28□□□□□ -1.56
RTA1YGR213C GYP8P43570 497 aa5.28□□□□□ -1.56
RTA1YGR213C CHA4P43634 648 aa5.28□□□□□ -1.56
RTA1YGR213C MAL11P53048 616 aa5.28□□□□□ -1.56
RTA1YGR213C NOP12Q08208 459 aaKnown RBP5.28□□□□□ -1.56
RTA1YGR213C AIM44Q99299 758 aa5.28□□□□□ -1.56
RTA1YGR213C RFA1P22336 621 aaKnown RBP5.27□□□□□ -1.57
RTA1YGR213C URA1P28272 314 aaPredicted RBP5.27□□□□□ -1.57
RTA1YGR213C NIT3P49954 291 aa5.27□□□□□ -1.57
RTA1YGR213C HSV2P50079 448 aaPredicted RBP5.27□□□□□ -1.57
RTA1YGR213C RNH70P53331 553 aa5.27□□□□□ -1.57
RTA1YGR213C HDA1P53973 706 aa5.27□□□□□ -1.57
RTA1YGR213C YAP6Q03935 383 aa5.27□□□□□ -1.57
RTA1YGR213C FBP1P09201 348 aa5.26□□□□□ -1.57
RTA1YGR213C RRP14P36080 434 aaKnown RBP5.26□□□□□ -1.57
RTA1YGR213C DAM1P53267 343 aa5.26□□□□□ -1.57
RTA1YGR213C VPS30Q02948 557 aa5.26□□□□□ -1.57
RTA1YGR213C ATP25Q03153 612 aa5.26□□□□□ -1.57
RTA1YGR213C PHR1P05066 565 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
RTA1YGR213C MSH2P25847 964 aa5.25□□□□□ -1.57
RTA1YGR213C THI4P32318 326 aa5.25□□□□□ -1.57
RTA1YGR213C SPC29P33419 253 aa5.25□□□□□ -1.57
RTA1YGR213C NMD2P38798 1089 aaKnown RBP5.25□□□□□ -1.57
RTA1YGR213C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.25□□□□□ -1.57not detected
RTA1YGR213C NOG2P53742 486 aaKnown RBP5.25□□□□□ -1.57
RTA1YGR213C YKR011CQ02209 353 aa5.25□□□□□ -1.57
RTA1YGR213C SSL1Q04673 461 aaPredicted RBP5.25□□□□□ -1.57
RTA1YGR213C YLR224WQ05947 369 aa5.25□□□□□ -1.57
RTA1YGR213C WHI4Q07655 649 aaKnown RBP5.25□□□□□ -1.57
RTA1YGR213C YLR358CO13565 187 aa5.24□□□□□ -1.57
RTA1YGR213C RAD53P22216 821 aa5.24□□□□□ -1.57
RTA1YGR213C RPD3P32561 433 aa5.24□□□□□ -1.57
RTA1YGR213C TYE7P33122 291 aaPredicted RBP5.24□□□□□ -1.57
RTA1YGR213C CEP3P40969 608 aa5.24□□□□□ -1.57
RTA1YGR213C YFR016CP43597 1233 aaKnown RBP5.24□□□□□ -1.57
RTA1YGR213C RPS0BP46654 252 aaKnown RBP5.24□□□□□ -1.57
RTA1YGR213C TY4A-JP47023 414 aa5.24□□□□□ -1.57
RTA1YGR213C ALG12P53730 551 aa5.24□□□□□ -1.57
RTA1YGR213C UPC2Q12151 913 aa5.24□□□□□ -1.57
RTA1YGR213C MDM12Q92328 271 aa5.24□□□□□ -1.57
RTA1YGR213C MET6P05694 767 aaKnown RBP5.23□□□□□ -1.57
RTA1YGR213C PPG1P32838 368 aa5.23□□□□□ -1.57
RTA1YGR213C LST4P34239 828 aa5.23□□□□□ -1.57
RTA1YGR213C YIL108WP40483 696 aaKnown RBP5.23□□□□□ -1.57
RTA1YGR213C NCS6P53088 359 aa5.23□□□□□ -1.57
RTA1YGR213C MET7Q08645 548 aa5.23□□□□□ -1.57
RTA1YGR213C RPS9AO13516 197 aaKnown RBP5.22□□□□□ -1.57
RTA1YGR213C DAL7P21826 554 aa5.22□□□□□ -1.57
RTA1YGR213C STE14P32584 239 aa5.22□□□□□ -1.57
RTA1YGR213C FLR1P38124 548 aa5.22□□□□□ -1.57
RTA1YGR213C PLB1P39105 664 aa5.22□□□□□ -1.57
RTA1YGR213C TAD1P53065 400 aa5.22□□□□□ -1.57
RTA1YGR213C CLU1Q03690 1277 aaKnown RBP5.22□□□□□ -1.57
RTA1YGR213C YDR514CQ04408 483 aa5.22□□□□□ -1.57
RTA1YGR213C POB3Q04636 552 aaKnown RBP5.22□□□□□ -1.57
RTA1YGR213C REH1Q06709 432 aa5.22□□□□□ -1.57
RTA1YGR213C STE11P23561 717 aa5.21□□□□□ -1.58
RTA1YGR213C CYS3P31373 394 aaKnown RBP5.21□□□□□ -1.58
RTA1YGR213C SDP1P40479 209 aa5.21□□□□□ -1.58
RTA1YGR213C UGO1Q03327 502 aa5.21□□□□□ -1.58
RTA1YGR213C KCS1Q12494 1050 aa5.21□□□□□ -1.58
RTA1YGR213C MEF1P25039 761 aa5.2□□□□□ -1.58
RTA1YGR213C SED4P25365 1065 aa5.2□□□□□ -1.58
RTA1YGR213C MTC2P34246 357 aa5.2□□□□□ -1.58
RTA1YGR213C MNN4P36044 1178 aa5.2□□□□□ -1.58
RTA1YGR213C CTF8P38877 133 aa5.2□□□□□ -1.58
RTA1YGR213C HXT16P47185 567 aa5.2□□□□□ -1.58
RTA1YGR213C LRS4Q04087 347 aaKnown RBP5.2□□□□□ -1.58
RTA1YGR213C TMA10Q06177 86 aa5.2□□□□□ -1.58
RTA1YGR213C RSC3Q06639 885 aa5.2□□□□□ -1.58
RTA1YGR213C ESC8Q08119 714 aa5.2□□□□□ -1.58
RTA1YGR213C NPC2Q12408 173 aa5.2□□□□□ -1.58
RTA1YGR213C YCL002CP25565 263 aa5.19□□□□□ -1.58
RTA1YGR213C PEX6P33760 1030 aa5.19□□□□□ -1.58
RTA1YGR213C MNN10P50108 393 aaKnown RBP5.19□□□□□ -1.58
RTA1YGR213C NTG2Q08214 380 aa5.19□□□□□ -1.58
RTA1YGR213C CDC9P04819 755 aa5.18□□□□□ -1.58
RTA1YGR213C GSY1P23337 708 aa5.18□□□□□ -1.58
RTA1YGR213C TAF1P46677 1066 aa5.18□□□□□ -1.58
RTA1YGR213C EXG2P52911 562 aa5.18□□□□□ -1.58
RTA1YGR213C PUS2P53167 370 aa5.18□□□□□ -1.58
RTA1YGR213C HAL9Q12180 1030 aa5.18□□□□□ -1.58
RTA1YGR213C YOR022CQ12204 715 aa5.18□□□□□ -1.58
RTA1YGR213C VBA3P25594 458 aa5.17□□□□□ -1.58
RTA1YGR213C PER1P25625 357 aa5.17□□□□□ -1.58
RTA1YGR213C CTS1P29029 562 aa5.17□□□□□ -1.58
RTA1YGR213C MPT5P39016 859 aaKnown RBP RIP-Chip data5.17□□□□□ -1.58not detected
RTA1YGR213C DSS1P39112 969 aa5.17□□□□□ -1.58
RTA1YGR213C MCM6P53091 1017 aaKnown RBP5.17□□□□□ -1.58
RTA1YGR213C DUS1P53759 423 aaKnown RBP5.17□□□□□ -1.58
RTA1YGR213C GUP2Q08929 609 aa5.17□□□□□ -1.58
RTA1YGR213C YBR182C-AQ8TGU6 64 aa5.17□□□□□ -1.58
RTA1YGR213C PRC1P00729 532 aa5.16□□□□□ -1.58
RTA1YGR213C DCG1P32460 244 aa5.16□□□□□ -1.58
RTA1YGR213C STO1P34160 861 aaKnown RBP5.16□□□□□ -1.58
RTA1YGR213C MCD4P36051 919 aa5.16□□□□□ -1.58
RTA1YGR213C YHR078WP38799 552 aa5.16□□□□□ -1.58
RTA1YGR213C SET5P38890 526 aaKnown RBP5.16□□□□□ -1.58
RTA1YGR213C RLP7P40693 322 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms