RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W DON1Q05610 365 aa3.91□□□□□ -1.78
SPT6YGR116W YLL054CQ12244 843 aa3.91□□□□□ -1.78
SPT6YGR116W ADE3P07245 946 aaKnown RBP3.9□□□□□ -1.78
SPT6YGR116W SWI6P09959 803 aa3.9□□□□□ -1.78
SPT6YGR116W SSP1P38871 571 aa3.9□□□□□ -1.78
SPT6YGR116W PTA1Q01329 785 aaPredicted RBP3.9□□□□□ -1.78
SPT6YGR116W SYH1Q02875 849 aaKnown RBP3.9□□□□□ -1.78
SPT6YGR116W MET7Q08645 548 aa3.9□□□□□ -1.78
SPT6YGR116W OSW1Q08692 278 aa3.9□□□□□ -1.78
SPT6YGR116W CKA2P19454 339 aa3.9□□□□□ -1.79
SPT6YGR116W CDC48P25694 835 aaKnown RBP3.9□□□□□ -1.79
SPT6YGR116W YKR078WP36158 585 aaKnown RBP3.9□□□□□ -1.79
SPT6YGR116W TOS3P43637 560 aa3.9□□□□□ -1.79
SPT6YGR116W FMP33P46998 180 aa3.9□□□□□ -1.79
SPT6YGR116W YGL138CP53122 345 aa3.9□□□□□ -1.79
SPT6YGR116W GIS4Q04233 774 aa3.9□□□□□ -1.79
SPT6YGR116W CLF1Q12309 687 aaPredicted RBP3.9□□□□□ -1.79
SPT6YGR116W ADE2P21264 571 aaKnown RBP3.9□□□□□ -1.79
SPT6YGR116W MAK31P23059 88 aa3.9□□□□□ -1.79
SPT6YGR116W MCD4P36051 919 aa3.9□□□□□ -1.79
SPT6YGR116W AMN1P38285 549 aaPredicted RBP3.9□□□□□ -1.79
SPT6YGR116W RTS1P38903 757 aa3.9□□□□□ -1.79
SPT6YGR116W MMM1P41800 426 aa3.9□□□□□ -1.79
SPT6YGR116W EMW1P42842 904 aaKnown RBP3.9□□□□□ -1.79
SPT6YGR116W FMS1P50264 508 aa3.9□□□□□ -1.79
SPT6YGR116W VID30P53076 958 aa3.9□□□□□ -1.79
SPT6YGR116W SRL4Q03085 281 aa3.9□□□□□ -1.79
SPT6YGR116W UTP14Q04500 899 aaKnown RBP3.9□□□□□ -1.79
SPT6YGR116W DSF2P38213 736 aa3.89□□□□□ -1.79
SPT6YGR116W ERP5P38819 212 aa3.89□□□□□ -1.79
SPT6YGR116W STT3P39007 718 aaKnown RBP3.89□□□□□ -1.79
SPT6YGR116W THI6P41835 540 aa3.89□□□□□ -1.79
SPT6YGR116W YKR005CQ02203 525 aa3.89□□□□□ -1.79
SPT6YGR116W TOS4Q06266 489 aa3.89□□□□□ -1.79
SPT6YGR116W GLE1Q12315 538 aa3.89□□□□□ -1.79
SPT6YGR116W ENO2P00925 437 aaKnown RBP3.89□□□□□ -1.79
SPT6YGR116W RPL24AP04449 155 aaKnown RBP3.89□□□□□ -1.79
SPT6YGR116W URA4P20051 364 aa3.89□□□□□ -1.79
SPT6YGR116W CLB2P24869 491 aa3.89□□□□□ -1.79
SPT6YGR116W EUG1P32474 517 aa3.89□□□□□ -1.79
SPT6YGR116W LYS14P40971 790 aa3.89□□□□□ -1.79
SPT6YGR116W RBL2P48606 106 aaKnown RBP3.89□□□□□ -1.79
SPT6YGR116W ALD6P54115 500 aaKnown RBP3.89□□□□□ -1.79
SPT6YGR116W UBP2Q01476 1272 aa3.89□□□□□ -1.79
SPT6YGR116W SMD2Q06217 110 aaKnown RBP3.89□□□□□ -1.79
SPT6YGR116W MLH2Q07980 695 aa3.89□□□□□ -1.79
SPT6YGR116W YOL075CQ08234 1294 aa3.89□□□□□ -1.79
SPT6YGR116W YIL177CP40434 1758 aa3.89□□□□□ -1.79
SPT6YGR116W YJL225CP40889 1758 aa3.89□□□□□ -1.79
SPT6YGR116W ARG82P07250 355 aa3.89□□□□□ -1.79
SPT6YGR116W MIP1P15801 1254 aa3.89□□□□□ -1.79
SPT6YGR116W KIP1P28742 1111 aa3.89□□□□□ -1.79
SPT6YGR116W RAD16P31244 790 aa3.89□□□□□ -1.79
SPT6YGR116W MTG1Q03151 367 aaPredicted RBP3.89□□□□□ -1.79
SPT6YGR116W SIL1Q08199 421 aa3.89□□□□□ -1.79
SPT6YGR116W YPT6Q99260 215 aa3.89□□□□□ -1.79
SPT6YGR116W TY4B-PA0A0B7P3V8 1104 aa3.88□□□□□ -1.79
SPT6YGR116W YLR462WO13556 202 aa3.88□□□□□ -1.79
SPT6YGR116W DPB2P24482 689 aaPredicted RBP3.88□□□□□ -1.79
SPT6YGR116W SPS22P25380 463 aa3.88□□□□□ -1.79
SPT6YGR116W SEC20P28791 383 aa3.88□□□□□ -1.79
SPT6YGR116W TIF3P34167 436 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W CCL1P37366 393 aa3.88□□□□□ -1.79
SPT6YGR116W RFC3P38629 340 aa3.88□□□□□ -1.79
SPT6YGR116W YHL049CP38722 271 aa3.88□□□□□ -1.79
SPT6YGR116W YEL075CP39972 122 aa3.88□□□□□ -1.79
SPT6YGR116W YER189WP40104 122 aa3.88□□□□□ -1.79
SPT6YGR116W YFL064CP43540 174 aa3.88□□□□□ -1.79
SPT6YGR116W ZIP2P53061 704 aa3.88□□□□□ -1.79
SPT6YGR116W BNI5P53890 448 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W CIK1Q01649 594 aa3.88□□□□□ -1.79
SPT6YGR116W YMR187CQ03236 431 aa3.88□□□□□ -1.79
SPT6YGR116W TFB3Q03290 321 aa3.88□□□□□ -1.79
SPT6YGR116W MSH6Q03834 1242 aa3.88□□□□□ -1.79
SPT6YGR116W YPL216WQ08964 1102 aa3.88□□□□□ -1.79
SPT6YGR116W YBL111CQ3E7Y5 667 aa3.88□□□□□ -1.79
SPT6YGR116W ERG11P10614 530 aa3.88□□□□□ -1.79
SPT6YGR116W GRX1P25373 110 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W RIB7P33312 244 aa3.88□□□□□ -1.79
SPT6YGR116W COY1P34237 679 aa3.88□□□□□ -1.79
SPT6YGR116W KES1P35844 434 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W SRL3P36167 246 aa3.88□□□□□ -1.79
SPT6YGR116W ERG7P38604 731 aa3.88□□□□□ -1.79
SPT6YGR116W HAL5P38970 855 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W DIM1P41819 318 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W ATG36P46983 293 aa3.88□□□□□ -1.79
SPT6YGR116W ASE1P50275 885 aa3.88□□□□□ -1.79
SPT6YGR116W DSE4P53753 1117 aa3.88□□□□□ -1.79
SPT6YGR116W RPM2Q02773 1202 aa3.88□□□□□ -1.79
SPT6YGR116W YLH47Q06493 454 aa3.88□□□□□ -1.79
SPT6YGR116W ARG8P18544 423 aa3.88□□□□□ -1.79
SPT6YGR116W DBP5P20449 482 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W BOI1P38041 980 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W YGR153WP48238 217 aa3.88□□□□□ -1.79
SPT6YGR116W PRP42Q03776 544 aaKnown RBP3.88□□□□□ -1.79
SPT6YGR116W BCP1Q06338 283 aa3.88□□□□□ -1.79
SPT6YGR116W MEU1Q07938 337 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
SPT6YGR116W SMC5Q08204 1093 aa3.88□□□□□ -1.79
SPT6YGR116W RIT1P23796 513 aa3.88□□□□□ -1.79
SPT6YGR116W RPT3P33298 428 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms