RNA–Protein interactions for RNA: YFL044C

OTU1, Transcript of Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p, yeastyeast

Gene OTU1, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
OTU1YFL044C UBX5Q06682 500 aa4.52□□□□□ -1.69
OTU1YFL044C YDL124WQ07551 312 aaKnown RBP4.52□□□□□ -1.69
OTU1YFL044C SUT2Q12286 268 aa4.52□□□□□ -1.69
OTU1YFL044C YOR131CQ12486 218 aa4.52□□□□□ -1.69
OTU1YFL044C FMP27Q06179 2628 aa4.51□□□□□ -1.69
OTU1YFL044C AI1P03875 834 aa4.51□□□□□ -1.69
OTU1YFL044C CUP1-1P0CX80 61 aa4.51□□□□□ -1.69
OTU1YFL044C CUP1-2P0CX81 61 aa4.51□□□□□ -1.69
OTU1YFL044C STI1P15705 589 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
OTU1YFL044C SAC7P17121 654 aa4.51□□□□□ -1.69
OTU1YFL044C PRI2P20457 528 aa4.51□□□□□ -1.69
OTU1YFL044C GCD7P32502 381 aaPredicted RBP4.51□□□□□ -1.69
OTU1YFL044C RGT1P32862 1170 aa4.51□□□□□ -1.69
OTU1YFL044C PBP2P38151 413 aaKnown RBP RIP-Chip data4.51□□□□□ -1.69not detected
OTU1YFL044C PAN5P38787 379 aa4.51□□□□□ -1.69
OTU1YFL044C AFG3P39925 761 aa4.51□□□□□ -1.69
OTU1YFL044C BUD6P41697 788 aa4.51□□□□□ -1.69
OTU1YFL044C YJL049WP47048 450 aa4.51□□□□□ -1.69
OTU1YFL044C FAA4P47912 694 aaKnown RBP4.51□□□□□ -1.69
OTU1YFL044C YRB30P53107 440 aaPredicted RBP4.51□□□□□ -1.69
OTU1YFL044C GDE1Q02979 1223 aa4.51□□□□□ -1.69
OTU1YFL044C RPN4Q03465 531 aa4.51□□□□□ -1.69
OTU1YFL044C RTT10Q08924 1013 aa4.51□□□□□ -1.69
OTU1YFL044C KEL3Q08979 651 aaPredicted RBP4.51□□□□□ -1.69
OTU1YFL044C MYO1P08964 1928 aa4.5□□□□□ -1.69
OTU1YFL044C TY4B-PA0A0B7P3V8 1104 aa4.5□□□□□ -1.69
OTU1YFL044C GCR1P07261 785 aa4.5□□□□□ -1.69
OTU1YFL044C VMA2P16140 517 aaKnown RBP4.5□□□□□ -1.69
OTU1YFL044C PRE8P23639 250 aa4.5□□□□□ -1.69
OTU1YFL044C RAD27P26793 382 aa4.5□□□□□ -1.69
OTU1YFL044C GRX7P38068 203 aa4.5□□□□□ -1.69
OTU1YFL044C KSP1P38691 1029 aaKnown RBP4.5□□□□□ -1.69
OTU1YFL044C TAT2P38967 592 aa4.5□□□□□ -1.69
OTU1YFL044C FUN12P39730 1002 aaKnown RBP4.5□□□□□ -1.69
OTU1YFL044C OSW7P43611 510 aa4.5□□□□□ -1.69
OTU1YFL044C YGL140CP53120 1219 aa4.5□□□□□ -1.69
OTU1YFL044C YIG1Q08956 461 aa4.5□□□□□ -1.69
OTU1YFL044C TY4A-HQ6Q5P6 413 aa4.5□□□□□ -1.69
OTU1YFL044C TAF13P11747 167 aa4.49□□□□□ -1.69
OTU1YFL044C SEC23P15303 768 aaKnown RBP4.49□□□□□ -1.69
OTU1YFL044C SRM1P21827 482 aa4.49□□□□□ -1.69
OTU1YFL044C RRP14P36080 434 aaKnown RBP4.49□□□□□ -1.69
OTU1YFL044C EXO5P38289 585 aa4.49□□□□□ -1.69
OTU1YFL044C HUL5P53119 910 aa4.49□□□□□ -1.69
OTU1YFL044C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
OTU1YFL044C YML037CQ03703 340 aa4.49□□□□□ -1.69
OTU1YFL044C NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69not detected
OTU1YFL044C SKG3Q06315 1026 aa4.49□□□□□ -1.69
OTU1YFL044C CDC45Q08032 650 aa4.49□□□□□ -1.69
OTU1YFL044C LAP2Q10740 671 aa4.49□□□□□ -1.69
OTU1YFL044C YLL054CQ12244 843 aa4.49□□□□□ -1.69
OTU1YFL044C KRS1P15180 591 aaKnown RBP4.48□□□□□ -1.69
OTU1YFL044C MAE1P36013 669 aaKnown RBP4.48□□□□□ -1.69
OTU1YFL044C YKR018CP36114 725 aa4.48□□□□□ -1.69
OTU1YFL044C TOM71P38825 639 aaKnown RBP4.48□□□□□ -1.69
OTU1YFL044C GCV1P48015 400 aa4.48□□□□□ -1.69
OTU1YFL044C YGR125WP53273 1036 aa4.48□□□□□ -1.69
OTU1YFL044C SOL4P53315 255 aa4.48□□□□□ -1.69
OTU1YFL044C BRE5P53741 515 aaKnown RBP4.48□□□□□ -1.69
OTU1YFL044C DSE4P53753 1117 aa4.48□□□□□ -1.69
OTU1YFL044C HDA2Q06629 674 aa4.48□□□□□ -1.69
OTU1YFL044C YPL260WQ08977 551 aa4.48□□□□□ -1.69
OTU1YFL044C TMA46Q12000 345 aaKnown RBP4.48□□□□□ -1.69
OTU1YFL044C ELG1Q12050 791 aa4.48□□□□□ -1.69
OTU1YFL044C NCB2Q92317 146 aa4.48□□□□□ -1.69
OTU1YFL044C DED1P06634 604 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C HEM1P09950 548 aaPredicted RBP4.47□□□□□ -1.69
OTU1YFL044C TY1A-LR4P0C2I8 440 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C TY1A-DR6P0CX70 440 aa4.47□□□□□ -1.69
OTU1YFL044C TY1A-ER1P0CX71 440 aa4.47□□□□□ -1.69
OTU1YFL044C TY1A-LR2P0CX72 440 aa4.47□□□□□ -1.69
OTU1YFL044C TY1A-PLP0CX73 440 aa4.47□□□□□ -1.69
OTU1YFL044C TY1A-JR1P0CX74 440 aa4.47□□□□□ -1.69
OTU1YFL044C TY1A-LR3P0CX75 440 aa4.47□□□□□ -1.69
OTU1YFL044C TY1A-ML2P0CX76 440 aa4.47□□□□□ -1.69
OTU1YFL044C VMA4P22203 233 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C BCS1P32839 456 aa4.47□□□□□ -1.69
OTU1YFL044C DUT1P33317 147 aa4.47□□□□□ -1.69
OTU1YFL044C ARL1P38116 183 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C ATG14P38270 344 aa4.47□□□□□ -1.69
OTU1YFL044C RRM3P38766 723 aa4.47□□□□□ -1.69
OTU1YFL044C YNG2P38806 282 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C PES4P39684 611 aa4.47□□□□□ -1.69
OTU1YFL044C YIL092WP40497 633 aa4.47□□□□□ -1.69
OTU1YFL044C SBE2P42223 864 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C YGL242CP53066 181 aa4.47□□□□□ -1.69
OTU1YFL044C TDA5Q06417 326 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C OPI10Q08202 246 aa4.47□□□□□ -1.69
OTU1YFL044C TY1A-GR1Q12085 440 aa4.47□□□□□ -1.69
OTU1YFL044C FAL1Q12099 399 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C TY1A-OLQ92392 440 aaKnown RBP4.47□□□□□ -1.69
OTU1YFL044C LAM4P38800 1345 aa4.46□□□□□ -1.69
OTU1YFL044C SCP160P06105 1222 aaKnown RBP RIP-Chip data4.46□□□□□ -1.7not detected
OTU1YFL044C TSR4P25040 408 aa4.46□□□□□ -1.7
OTU1YFL044C TIM23P32897 222 aa4.46□□□□□ -1.7
OTU1YFL044C YKL069WP36088 180 aa4.46□□□□□ -1.7
OTU1YFL044C KTR3P38130 404 aaPredicted RBP4.46□□□□□ -1.7
OTU1YFL044C REI1P38344 393 aaPredicted RBP4.46□□□□□ -1.7
OTU1YFL044C FPR3P38911 411 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms