RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C YGR117CP53270 476 aa6.99□□□□□ -1.29
YPT1YFL038C SPO21Q12411 609 aa6.99□□□□□ -1.29
YPT1YFL038C TY1B-AO13527 1196 aaKnown RBP6.98□□□□□ -1.29
YPT1YFL038C CBP1P07252 654 aa6.98□□□□□ -1.29
YPT1YFL038C KIP1P28742 1111 aa6.98□□□□□ -1.29
YPT1YFL038C SEC21P32074 935 aaKnown RBP6.98□□□□□ -1.29
YPT1YFL038C YSC83P32792 385 aa6.98□□□□□ -1.29
YPT1YFL038C SEC8P32855 1065 aa6.98□□□□□ -1.29
YPT1YFL038C RAD54P32863 898 aa6.98□□□□□ -1.29
YPT1YFL038C TGL1P34163 548 aa6.98□□□□□ -1.29
YPT1YFL038C SPT21P35209 758 aa6.98□□□□□ -1.29
YPT1YFL038C YKL050CP35736 922 aa6.98□□□□□ -1.29
YPT1YFL038C ACA1P39970 489 aa6.98□□□□□ -1.29
YPT1YFL038C PSY2P40164 858 aa6.98□□□□□ -1.29
YPT1YFL038C TRS85P46944 698 aa6.98□□□□□ -1.29
YPT1YFL038C JJJ1P53863 590 aa6.98□□□□□ -1.29
YPT1YFL038C NCS2P53923 493 aaPredicted RBP6.98□□□□□ -1.29
YPT1YFL038C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
YPT1YFL038C YML037CQ03703 340 aa6.98□□□□□ -1.29
YPT1YFL038C TMA64Q04600 565 aaKnown RBP6.98□□□□□ -1.29
YPT1YFL038C DON1Q05610 365 aa6.98□□□□□ -1.29
YPT1YFL038C HPR1P17629 752 aaKnown RBP6.97□□□□□ -1.29
YPT1YFL038C MMS21P38632 267 aa6.97□□□□□ -1.29
YPT1YFL038C SAK1P38990 1142 aa6.97□□□□□ -1.29
YPT1YFL038C SPC72P39723 622 aa6.97□□□□□ -1.29
YPT1YFL038C LCP5P40079 357 aaPredicted RBP6.97□□□□□ -1.29
YPT1YFL038C YNL320WP42840 284 aa6.97□□□□□ -1.29
YPT1YFL038C VPS70P47161 811 aa6.97□□□□□ -1.29
YPT1YFL038C RPL22BP56628 122 aaKnown RBP6.97□□□□□ -1.29
YPT1YFL038C TIM8P57744 87 aa6.97□□□□□ -1.29
YPT1YFL038C PTA1Q01329 785 aaPredicted RBP6.97□□□□□ -1.29
YPT1YFL038C MTG1Q03151 367 aaPredicted RBP6.97□□□□□ -1.29
YPT1YFL038C YMR187CQ03236 431 aa6.97□□□□□ -1.29
YPT1YFL038C YML082WQ04533 649 aaKnown RBP6.97□□□□□ -1.29
YPT1YFL038C SPH1Q06160 661 aa6.97□□□□□ -1.29
YPT1YFL038C AIM41Q12032 185 aa6.97□□□□□ -1.29
YPT1YFL038C RKM4Q12504 494 aa6.97□□□□□ -1.29
YPT1YFL038C YLR462WO13556 202 aa6.96□□□□□ -1.3
YPT1YFL038C PYC1P11154 1178 aaKnown RBP6.96□□□□□ -1.3
YPT1YFL038C GAL2P13181 574 aa6.96□□□□□ -1.3
YPT1YFL038C GAP1P19145 602 aaPredicted RBP6.96□□□□□ -1.3
YPT1YFL038C PRP9P19736 530 aaKnown RBP6.96□□□□□ -1.3
YPT1YFL038C DBP5P20449 482 aaKnown RBP6.96□□□□□ -1.3
YPT1YFL038C CDC10P25342 322 aaKnown RBP6.96□□□□□ -1.3
YPT1YFL038C PER1P25625 357 aa6.96□□□□□ -1.3
YPT1YFL038C NAM7P30771 971 aaKnown RBP6.96□□□□□ -1.3
YPT1YFL038C TRZ1P36159 838 aaPredicted RBP6.96□□□□□ -1.3
YPT1YFL038C YSW1P38280 609 aa6.96□□□□□ -1.3
YPT1YFL038C YHL049CP38722 271 aa6.96□□□□□ -1.3
YPT1YFL038C YEL075CP39972 122 aa6.96□□□□□ -1.3
YPT1YFL038C YER189WP40104 122 aa6.96□□□□□ -1.3
YPT1YFL038C YFL064CP43540 174 aa6.96□□□□□ -1.3
YPT1YFL038C ZPR1P53303 486 aaKnown RBP6.96□□□□□ -1.3
YPT1YFL038C TDA9Q04545 1251 aa6.96□□□□□ -1.3
YPT1YFL038C ISA1Q07821 250 aaPredicted RBP6.96□□□□□ -1.3
YPT1YFL038C YDL206WQ12424 762 aa6.96□□□□□ -1.3
YPT1YFL038C YBL111CQ3E7Y5 667 aa6.96□□□□□ -1.3
YPT1YFL038C EUG1P32474 517 aa6.95□□□□□ -1.3
YPT1YFL038C VPS35P34110 944 aa6.95□□□□□ -1.3
YPT1YFL038C OAF3P36023 863 aa6.95□□□□□ -1.3
YPT1YFL038C EXO5P38289 585 aa6.95□□□□□ -1.3
YPT1YFL038C HIS2P38635 335 aa6.95□□□□□ -1.3
YPT1YFL038C RIM8P53179 542 aa6.95□□□□□ -1.3
YPT1YFL038C FPK1P53739 893 aa6.95□□□□□ -1.3
YPT1YFL038C CRD1Q07560 283 aa6.95□□□□□ -1.3
YPT1YFL038C CDC53Q12018 815 aaKnown RBP6.95□□□□□ -1.3
YPT1YFL038C HIF1Q12373 385 aa6.95□□□□□ -1.3
YPT1YFL038C CSR2Q12734 1121 aa6.95□□□□□ -1.3
YPT1YFL038C ARG4P04076 463 aaPredicted RBP6.94□□□□□ -1.3
YPT1YFL038C CDC33P07260 213 aaKnown RBP6.94□□□□□ -1.3
YPT1YFL038C RPB2P08518 1224 aaKnown RBP6.94□□□□□ -1.3
YPT1YFL038C ADH4P10127 382 aa6.94□□□□□ -1.3
YPT1YFL038C PEP5P12868 1029 aa6.94□□□□□ -1.3
YPT1YFL038C YME1P32795 747 aa6.94□□□□□ -1.3
YPT1YFL038C COT1P32798 439 aa6.94□□□□□ -1.3
YPT1YFL038C MCR1P36060 302 aaKnown RBP6.94□□□□□ -1.3
YPT1YFL038C MED8P38304 223 aa6.94□□□□□ -1.3
YPT1YFL038C RRT2P38332 387 aa6.94□□□□□ -1.3
YPT1YFL038C CCT2P39076 527 aaKnown RBP6.94□□□□□ -1.3
YPT1YFL038C ECM1P39715 212 aa6.94□□□□□ -1.3
YPT1YFL038C YTA12P40341 825 aa6.94□□□□□ -1.3
YPT1YFL038C SAP185P40856 1058 aa6.94□□□□□ -1.3
YPT1YFL038C FET4P40988 552 aa6.94□□□□□ -1.3
YPT1YFL038C NMD5P46970 1048 aa6.94□□□□□ -1.3
YPT1YFL038C BRO1P48582 844 aa6.94□□□□□ -1.3
YPT1YFL038C TAM41P53230 385 aa6.94□□□□□ -1.3
YPT1YFL038C ATG16Q03818 150 aa6.94□□□□□ -1.3
YPT1YFL038C PUF3Q07807 879 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
YPT1YFL038C SAM1P10659 382 aaKnown RBP6.93□□□□□ -1.3
YPT1YFL038C ILV6P25605 309 aaKnown RBP6.93□□□□□ -1.3
YPT1YFL038C YCR051WP25631 222 aa6.93□□□□□ -1.3
YPT1YFL038C MUD1P32605 298 aaKnown RBP6.93□□□□□ -1.3
YPT1YFL038C TFC4P33339 1025 aa6.93□□□□□ -1.3
YPT1YFL038C ATG19P35193 415 aa6.93□□□□□ -1.3
YPT1YFL038C KAP123P40069 1113 aaKnown RBP6.93□□□□□ -1.3
YPT1YFL038C SMX2P40204 77 aaKnown RBP6.93□□□□□ -1.3
YPT1YFL038C YMR1P47147 688 aaKnown RBP RIP-Chip data6.93□□□□□ -1.3 RIP-Chip
YPT1YFL038C UTP6Q02354 440 aaKnown RBP6.93□□□□□ -1.3
YPT1YFL038C YML119WQ03208 357 aa6.93□□□□□ -1.3
YPT1YFL038C USA1Q03714 838 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms