RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM5, Length 282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM5YER146W CHS2P14180 963 aa9.63□□□□□ -0.87
LSM5YER146W SCJ1P25303 377 aa9.63□□□□□ -0.87
LSM5YER146W PDC6P26263 563 aaKnown RBP9.63□□□□□ -0.87
LSM5YER146W MFT1P33441 392 aaKnown RBP9.63□□□□□ -0.87
LSM5YER146W MCX1P38323 520 aaPredicted RBP9.63□□□□□ -0.87
LSM5YER146W SMC2P38989 1170 aaKnown RBP9.63□□□□□ -0.87
LSM5YER146W EAF5P39995 279 aa9.63□□□□□ -0.87
LSM5YER146W NPP2P39997 493 aa9.63□□□□□ -0.87
LSM5YER146W ENV11P53246 860 aa9.63□□□□□ -0.87
LSM5YER146W YNL146WP53906 100 aa9.63□□□□□ -0.87
LSM5YER146W UTP5Q04177 643 aaKnown RBP9.63□□□□□ -0.87
LSM5YER146W YPR078CQ06813 372 aa9.63□□□□□ -0.87
LSM5YER146W MLH2Q07980 695 aa9.63□□□□□ -0.87
LSM5YER146W OSW2Q12202 724 aa9.63□□□□□ -0.87
LSM5YER146W PET111P08468 800 aa9.62□□□□□ -0.87
LSM5YER146W MUD1P32605 298 aaKnown RBP9.62□□□□□ -0.87
LSM5YER146W TMT1P32643 299 aa9.62□□□□□ -0.87
LSM5YER146W GUA1P38625 525 aaKnown RBP9.62□□□□□ -0.87
LSM5YER146W KSP1P38691 1029 aaKnown RBP9.62□□□□□ -0.87
LSM5YER146W IES1P43579 692 aa9.62□□□□□ -0.87
LSM5YER146W SMC3P47037 1230 aa9.62□□□□□ -0.87
LSM5YER146W JJJ3P47138 172 aa9.62□□□□□ -0.87
LSM5YER146W NCS6P53088 359 aa9.62□□□□□ -0.87
LSM5YER146W BOP3P53958 396 aa9.62□□□□□ -0.87
LSM5YER146W HFI1Q12060 488 aa9.62□□□□□ -0.87
LSM5YER146W DAS2Q12084 232 aa9.62□□□□□ -0.87
LSM5YER146W HIF1Q12373 385 aa9.62□□□□□ -0.87
LSM5YER146W SWI6P09959 803 aa9.61□□□□□ -0.87
LSM5YER146W VMA1P17255 1071 aaKnown RBP9.61□□□□□ -0.87
LSM5YER146W STE11P23561 717 aa9.61□□□□□ -0.87
LSM5YER146W KIP1P28742 1111 aa9.61□□□□□ -0.87
LSM5YER146W SMY2P32909 740 aaKnown RBP9.61□□□□□ -0.87
LSM5YER146W STO1P34160 861 aaKnown RBP9.61□□□□□ -0.87
LSM5YER146W HXT8P40886 569 aa9.61□□□□□ -0.87
LSM5YER146W PSP2P50109 593 aaKnown RBP9.61□□□□□ -0.87
LSM5YER146W CUS1Q02554 436 aaPredicted RBP9.61□□□□□ -0.87
LSM5YER146W MSC2Q03455 724 aa9.61□□□□□ -0.87
LSM5YER146W YDL206WQ12424 762 aa9.61□□□□□ -0.87
LSM5YER146W MTF2P10849 440 aa9.6□□□□□ -0.87
LSM5YER146W MAS2P11914 482 aa9.6□□□□□ -0.87
LSM5YER146W SNA3P14359 133 aa9.6□□□□□ -0.87
LSM5YER146W SSD1P24276 1250 aaKnown RBP RIP-Chip data9.6□□□□□ -0.87not detected
LSM5YER146W DBP1P24784 617 aaKnown RBP9.6□□□□□ -0.87
LSM5YER146W RAD57P25301 460 aa9.6□□□□□ -0.87
LSM5YER146W RRP43P25359 394 aaPredicted RBP9.6□□□□□ -0.87
LSM5YER146W BCS1P32839 456 aa9.6□□□□□ -0.87
LSM5YER146W RAD54P32863 898 aa9.6□□□□□ -0.87
LSM5YER146W YKL023WP36103 277 aaKnown RBP9.6□□□□□ -0.87
LSM5YER146W GPT2P36148 743 aa9.6□□□□□ -0.87
LSM5YER146W TCD1P38756 429 aa9.6□□□□□ -0.87
LSM5YER146W VPS70P47161 811 aa9.6□□□□□ -0.87
LSM5YER146W CUL3P53202 744 aa9.6□□□□□ -0.87
LSM5YER146W HOS3Q02959 697 aaKnown RBP9.6□□□□□ -0.87
LSM5YER146W OPY2Q06810 360 aa9.6□□□□□ -0.87
LSM5YER146W GIS3Q12418 502 aa9.6□□□□□ -0.87
LSM5YER146W ECM29P38737 1868 aa9.59□□□□□ -0.87
LSM5YER146W AFT1P22149 690 aa9.59□□□□□ -0.87
LSM5YER146W CAJ1P39101 391 aa9.59□□□□□ -0.87
LSM5YER146W SEC9P40357 651 aa9.59□□□□□ -0.87
LSM5YER146W CEP3P40969 608 aa9.59□□□□□ -0.87
LSM5YER146W SKP2P42843 763 aa9.59□□□□□ -0.87
LSM5YER146W OSW7P43611 510 aa9.59□□□□□ -0.87
LSM5YER146W ASN1P49089 572 aaKnown RBP9.59□□□□□ -0.87
LSM5YER146W APT1P49435 187 aaKnown RBP9.59□□□□□ -0.87
LSM5YER146W ORC5P50874 479 aa9.59□□□□□ -0.87
LSM5YER146W MNP1P53163 194 aaPredicted RBP9.59□□□□□ -0.87
LSM5YER146W UBP3Q01477 912 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
LSM5YER146W TSR1Q07381 788 aaKnown RBP9.59□□□□□ -0.87
LSM5YER146W SUT2Q12286 268 aa9.59□□□□□ -0.87
LSM5YER146W TRP2P00899 507 aaKnown RBP9.58□□□□□ -0.88
LSM5YER146W RPL17AP05740 184 aaKnown RBP9.58□□□□□ -0.88
LSM5YER146W TOM70P07213 617 aaKnown RBP9.58□□□□□ -0.88
LSM5YER146W SMC1P32908 1225 aa9.58□□□□□ -0.88
LSM5YER146W XRS2P33301 854 aa9.58□□□□□ -0.88
LSM5YER146W NIP100P33420 868 aa9.58□□□□□ -0.88
LSM5YER146W MRX3P38172 270 aa9.58□□□□□ -0.88
LSM5YER146W BUD16P39988 312 aa9.58□□□□□ -0.88
LSM5YER146W MMM1P41800 426 aa9.58□□□□□ -0.88
LSM5YER146W RPL17BP46990 184 aaKnown RBP9.58□□□□□ -0.88
LSM5YER146W HSH155P49955 971 aaKnown RBP9.58□□□□□ -0.88
LSM5YER146W RPA49Q01080 415 aaPredicted RBP9.58□□□□□ -0.88
LSM5YER146W NGL3Q03210 505 aa9.58□□□□□ -0.88
LSM5YER146W UTP14Q04500 899 aaKnown RBP9.58□□□□□ -0.88
LSM5YER146W SML1Q04964 104 aa9.58□□□□□ -0.88
LSM5YER146W ATG11Q12527 1178 aa9.58□□□□□ -0.88
LSM5YER146W NAT1P12945 854 aaKnown RBP9.57□□□□□ -0.88
LSM5YER146W CDC42P19073 191 aa9.57□□□□□ -0.88
LSM5YER146W SET5P38890 526 aaKnown RBP9.57□□□□□ -0.88
LSM5YER146W FTR1P40088 404 aa9.57□□□□□ -0.88
LSM5YER146W PSF2P40359 213 aa9.57□□□□□ -0.88
LSM5YER146W DAS1P47005 663 aa9.57□□□□□ -0.88
LSM5YER146W ACF4P47129 309 aa9.57□□□□□ -0.88
LSM5YER146W YGR021WP53212 290 aa9.57□□□□□ -0.88
LSM5YER146W BTN2P53286 410 aa9.57□□□□□ -0.88
LSM5YER146W DAK1P54838 584 aaKnown RBP9.57□□□□□ -0.88
LSM5YER146W SYH1Q02875 849 aaKnown RBP9.57□□□□□ -0.88
LSM5YER146W TRS130Q03660 1102 aa9.57□□□□□ -0.88
LSM5YER146W PPM1Q04081 328 aa9.57□□□□□ -0.88
LSM5YER146W VAC14Q06708 880 aa9.57□□□□□ -0.88
LSM5YER146W SIL1Q08199 421 aa9.57□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms