RNA–Protein interactions for RNA: YDR398W

UTP5, Transcript of Subunit of U3-containing Small Subunit (SSU) processome complex, yeast

Gene UTP5, Length 1,932 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UTP5	YDR398W	PLB1	P39105	664 aa		5.06	□□□□□ -1.6
UTP5	YDR398W	ERR1	P0CX10	437 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	ERR2	P0CX11	437 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	EMC3	P36039	253 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	GYP8	P43570	497 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	ALG2	P43636	503 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	NIT3	P49954	291 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	FPR4	Q06205	392 aa	Predicted RBP	5.05	□□□□□ -1.6
UTP5	YDR398W	YCR015C	P25616	317 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	CTS1	P29029	562 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	TYE7	P33122	291 aa	Predicted RBP	5.05	□□□□□ -1.6
UTP5	YDR398W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
UTP5	YDR398W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
UTP5	YDR398W	NCS6	P53088	359 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	HDA1	P53973	706 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	YKR011C	Q02209	353 aa		5.05	□□□□□ -1.6
UTP5	YDR398W	SSL1	Q04673	461 aa	Predicted RBP	5.05	□□□□□ -1.6
UTP5	YDR398W	RPD3	P32561	433 aa		5.04	□□□□□ -1.6
UTP5	YDR398W	GIP4	P39732	760 aa		5.04	□□□□□ -1.6
UTP5	YDR398W	NUP82	P40368	713 aa		5.04	□□□□□ -1.6
UTP5	YDR398W	CEP3	P40969	608 aa		5.04	□□□□□ -1.6
UTP5	YDR398W	MNN10	P50108	393 aa	Known RBP	5.04	□□□□□ -1.6
UTP5	YDR398W	YGR283C	P53336	341 aa	Predicted RBP	5.04	□□□□□ -1.6
UTP5	YDR398W	UPC2	Q12151	913 aa		5.04	□□□□□ -1.6
UTP5	YDR398W	NPC2	Q12408	173 aa		5.04	□□□□□ -1.6
UTP5	YDR398W	KCS1	Q12494	1050 aa		5.04	□□□□□ -1.6
UTP5	YDR398W	CIT2	P08679	460 aa		5.03	□□□□□ -1.6
UTP5	YDR398W	FBP1	P09201	348 aa		5.03	□□□□□ -1.6
UTP5	YDR398W	YKL222C	P35995	705 aa		5.03	□□□□□ -1.6
UTP5	YDR398W	MCM6	P53091	1017 aa	Known RBP	5.03	□□□□□ -1.6
UTP5	YDR398W	DAM1	P53267	343 aa		5.03	□□□□□ -1.6
UTP5	YDR398W	RPS9A	O13516	197 aa	Known RBP	5.03	□□□□□ -1.6
UTP5	YDR398W	YIL108W	P40483	696 aa	Known RBP	5.03	□□□□□ -1.6
UTP5	YDR398W	OSW7	P43611	510 aa		5.03	□□□□□ -1.6
UTP5	YDR398W	YLR125W	Q12138	136 aa		5.03	□□□□□ -1.6
UTP5	YDR398W	SED4	P25365	1065 aa		5.02	□□□□□ -1.61
UTP5	YDR398W	STE14	P32584	239 aa		5.02	□□□□□ -1.61
UTP5	YDR398W	SHM2	P37291	469 aa	Known RBP	5.02	□□□□□ -1.61
UTP5	YDR398W	GDH3	P39708	457 aa		5.02	□□□□□ -1.61
UTP5	YDR398W	NOG2	P53742	486 aa	Known RBP	5.02	□□□□□ -1.61
UTP5	YDR398W	ORC1	P54784	914 aa	Predicted RBP	5.02	□□□□□ -1.61
UTP5	YDR398W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
UTP5	YDR398W	PHO8	P11491	566 aa		5.01	□□□□□ -1.61
UTP5	YDR398W	SPC29	P33419	253 aa		5.01	□□□□□ -1.61
UTP5	YDR398W	HSV2	P50079	448 aa	Predicted RBP	5.01	□□□□□ -1.61
UTP5	YDR398W	EXG2	P52911	562 aa		5.01	□□□□□ -1.61
UTP5	YDR398W	SDP1	P40479	209 aa		5.01	□□□□□ -1.61
UTP5	YDR398W	MAL11	P53048	616 aa		5.01	□□□□□ -1.61
UTP5	YDR398W	ATP25	Q03153	612 aa		5.01	□□□□□ -1.61
UTP5	YDR398W	DAL7	P21826	554 aa		5	□□□□□ -1.61
UTP5	YDR398W	DCG1	P32460	244 aa		5	□□□□□ -1.61
UTP5	YDR398W	CTF8	P38877	133 aa		5	□□□□□ -1.61
UTP5	YDR398W	TAD1	P53065	400 aa		5	□□□□□ -1.61
UTP5	YDR398W	REH1	Q06709	432 aa		5	□□□□□ -1.61
UTP5	YDR398W	CYS3	P31373	394 aa	Known RBP	4.99	□□□□□ -1.61
UTP5	YDR398W	PUS2	P53167	370 aa		4.99	□□□□□ -1.61
UTP5	YDR398W	YDR514C	Q04408	483 aa		4.99	□□□□□ -1.61
UTP5	YDR398W	MET7	Q08645	548 aa		4.99	□□□□□ -1.61
UTP5	YDR398W	RAD53	P22216	821 aa		4.99	□□□□□ -1.61
UTP5	YDR398W	GUP2	Q08929	609 aa		4.99	□□□□□ -1.61
UTP5	YDR398W	PMA1	P05030	918 aa	Known RBP	4.98	□□□□□ -1.61
UTP5	YDR398W	HCM1	P25364	564 aa		4.98	□□□□□ -1.61
UTP5	YDR398W	LRS4	Q04087	347 aa	Known RBP	4.98	□□□□□ -1.61
UTP5	YDR398W	ENB1	Q08299	606 aa		4.98	□□□□□ -1.61
UTP5	YDR398W	HAL9	Q12180	1030 aa		4.98	□□□□□ -1.61
UTP5	YDR398W	YCL002C	P25565	263 aa		4.97	□□□□□ -1.61
UTP5	YDR398W	KAR4	P25583	335 aa		4.97	□□□□□ -1.61
UTP5	YDR398W	TY4A-J	P47023	414 aa		4.97	□□□□□ -1.61
UTP5	YDR398W	DUS1	P53759	423 aa	Known RBP	4.97	□□□□□ -1.61
UTP5	YDR398W	YOR022C	Q12204	715 aa		4.97	□□□□□ -1.61
UTP5	YDR398W	MDM12	Q92328	271 aa		4.97	□□□□□ -1.61
UTP5	YDR398W	SEC21	P32074	935 aa	Known RBP	4.96	□□□□□ -1.62
UTP5	YDR398W	THI4	P32318	326 aa		4.96	□□□□□ -1.62
UTP5	YDR398W	YHR078W	P38799	552 aa		4.96	□□□□□ -1.62
UTP5	YDR398W	SLU7	Q02775	382 aa	Known RBP	4.96	□□□□□ -1.62
UTP5	YDR398W	NTO1	Q12311	748 aa		4.96	□□□□□ -1.62
UTP5	YDR398W	LAS17	Q12446	633 aa		4.96	□□□□□ -1.62
UTP5	YDR398W	PRC1	P00729	532 aa		4.95	□□□□□ -1.62
UTP5	YDR398W	PFK1	P16861	987 aa	Known RBP	4.95	□□□□□ -1.62
UTP5	YDR398W	MSH2	P25847	964 aa		4.95	□□□□□ -1.62
UTP5	YDR398W	HXT16	P47185	567 aa		4.95	□□□□□ -1.62
UTP5	YDR398W	PHO23	P50947	330 aa		4.95	□□□□□ -1.62
UTP5	YDR398W	RSC3	Q06639	885 aa		4.95	□□□□□ -1.62
UTP5	YDR398W	PER1	P25625	357 aa		4.95	□□□□□ -1.62
UTP5	YDR398W	SAP190	P36123	1033 aa		4.95	□□□□□ -1.62
UTP5	YDR398W	SET5	P38890	526 aa	Known RBP	4.95	□□□□□ -1.62
UTP5	YDR398W	POB3	Q04636	552 aa	Known RBP	4.95	□□□□□ -1.62
UTP5	YDR398W	TUB3	P09734	445 aa	Known RBP	4.94	□□□□□ -1.62
UTP5	YDR398W	CAD1	P24813	409 aa	Known RBP	4.94	□□□□□ -1.62
UTP5	YDR398W	MTC2	P34246	357 aa		4.94	□□□□□ -1.62
UTP5	YDR398W	RRP14	P36080	434 aa	Known RBP	4.94	□□□□□ -1.62
UTP5	YDR398W	THI21	Q08975	551 aa		4.94	□□□□□ -1.62
UTP5	YDR398W	YBR182C-A	Q8TGU6	64 aa		4.94	□□□□□ -1.62
UTP5	YDR398W	MET6	P05694	767 aa	Known RBP	4.93	□□□□□ -1.62
UTP5	YDR398W	GSY1	P23337	708 aa		4.93	□□□□□ -1.62
UTP5	YDR398W	MEF1	P25039	761 aa		4.93	□□□□□ -1.62
UTP5	YDR398W	PMI40	P29952	429 aa	Known RBP	4.93	□□□□□ -1.62
UTP5	YDR398W	TRM2	P33753	639 aa		4.93	□□□□□ -1.62
UTP5	YDR398W	RLP7	P40693	322 aa	Known RBP	4.93	□□□□□ -1.62
UTP5	YDR398W	RNH70	P53331	553 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms