RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.9	□□□□□ -1.14	not detected
SKP1	YDR328C	SPC110	P32380	944 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	MUD1	P32605	298 aa	Known RBP	7.9	□□□□□ -1.14
SKP1	YDR328C	TMT1	P32643	299 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	LEO1	P38439	464 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	SDS3	P40505	327 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	SAD1	P43589	448 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	CUL3	P53202	744 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	VPS62	P53285	467 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	YLR287C	Q05881	355 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	YLR297W	Q05899	129 aa		7.9	□□□□□ -1.14
SKP1	YDR328C	PPR1	P07272	904 aa	Predicted RBP	7.89	□□□□□ -1.15
SKP1	YDR328C	TUP1	P16649	713 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	MSS51	P32335	436 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	PAH1	P32567	862 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	NPP2	P39997	493 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	COS5	P47187	383 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	ORC5	P50874	479 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	MNP1	P53163	194 aa	Predicted RBP	7.89	□□□□□ -1.15
SKP1	YDR328C	CTR9	P89105	1077 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	UME1	Q03010	460 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	UTP14	Q04500	899 aa	Known RBP	7.89	□□□□□ -1.15
SKP1	YDR328C	YCG1	Q06680	1035 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	CSR1	Q06705	408 aa	Known RBP	7.89	□□□□□ -1.15
SKP1	YDR328C	NEW1	Q08972	1196 aa	Known RBP	7.89	□□□□□ -1.15
SKP1	YDR328C	RRP6	Q12149	733 aa	Known RBP	7.89	□□□□□ -1.15
SKP1	YDR328C	LAA1	P39526	2014 aa		7.89	□□□□□ -1.15
SKP1	YDR328C	SWI6	P09959	803 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	WHI2	P12611	486 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	SPO12	P17123	173 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	VMA1	P17255	1071 aa	Known RBP	7.88	□□□□□ -1.15
SKP1	YDR328C	DUR3	P33413	735 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	MNR2	P35724	969 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	PCH2	P38126	564 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	ASN1	P49089	572 aa	Known RBP	7.88	□□□□□ -1.15
SKP1	YDR328C	HSH155	P49955	971 aa	Known RBP	7.88	□□□□□ -1.15
SKP1	YDR328C	TAD1	P53065	400 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	ALF1	P53904	254 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	ERG5	P54781	538 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	YDR090C	Q03193	310 aa		7.88	□□□□□ -1.15
SKP1	YDR328C	YKL023W	P36103	277 aa	Known RBP	7.87	□□□□□ -1.15
SKP1	YDR328C	UIP5	P36137	443 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	MRX3	P38172	270 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	VID24	P38263	362 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	CCC2	P38995	1004 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	YAP5	P40574	245 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	AZR1	P50080	613 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	TRS130	Q03660	1102 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	VPS38	Q05919	439 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	MAM3	Q12296	706 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	YDL206W	Q12424	762 aa		7.87	□□□□□ -1.15
SKP1	YDR328C	COX4	P04037	155 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	PDC6	P26263	563 aa	Known RBP	7.86	□□□□□ -1.15
SKP1	YDR328C	XRS2	P33301	854 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	7.86	□□□□□ -1.15	not detected
SKP1	YDR328C	MMS4	P38257	691 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	ALD5	P40047	520 aa	Known RBP	7.86	□□□□□ -1.15
SKP1	YDR328C	ATG3	P40344	310 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	SHQ1	P40486	507 aa	Predicted RBP	7.86	□□□□□ -1.15
SKP1	YDR328C	IES1	P43579	692 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	7.86	□□□□□ -1.15	not detected
SKP1	YDR328C	ESBP6	P53918	673 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.86	□□□□□ -1.15	not detected
SKP1	YDR328C	YPR078C	Q06813	372 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	SLX4	Q12098	748 aa		7.86	□□□□□ -1.15
SKP1	YDR328C	SCJ1	P25303	377 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	KIP1	P28742	1111 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	RAD54	P32863	898 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	SKG6	P32900	734 aa	Predicted RBP	7.85	□□□□□ -1.15
SKP1	YDR328C	SMC1	P32908	1225 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	NIP100	P33420	868 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	MFT1	P33441	392 aa	Known RBP	7.85	□□□□□ -1.15
SKP1	YDR328C	LDH1	P38139	375 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	STU2	P46675	888 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	MUK1	Q02866	612 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	VPS72	Q03388	795 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	GIS3	Q12418	502 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	ZPS1	Q12512	249 aa		7.85	□□□□□ -1.15
SKP1	YDR328C	HEM1	P09950	548 aa	Predicted RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	NAT1	P12945	854 aa	Known RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	SEC23	P15303	768 aa	Known RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	GLN3	P18494	730 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	CDC42	P19073	191 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	IME1	P21190	360 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	ADE2	P21264	571 aa	Known RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	RRP43	P25359	394 aa	Predicted RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	CDC11	P32458	415 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	YAP1801	P38856	637 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	TVP23	P38962	199 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	SMC2	P38989	1170 aa	Known RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	FTR1	P40088	404 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	DAS1	P47005	663 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	SMC3	P47037	1230 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	VPS70	P47161	811 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	TPO2	P53283	614 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	RPA49	Q01080	415 aa	Predicted RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	DOT1	Q04089	582 aa	Known RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	UTP5	Q04177	643 aa	Known RBP	7.84	□□□□□ -1.15
SKP1	YDR328C	ECM30	Q06673	1274 aa		7.84	□□□□□ -1.15
SKP1	YDR328C	TRP2	P00899	507 aa	Known RBP	7.83	□□□□□ -1.16

Retrieved 100 of 5,963 RNA–protein pairs in 40.7 ms